Array 1 6694-7651 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WQNN01000007.1 Streptococcus salivarius strain MCC742 NODE_10_length_360964_cov_111.290680, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      6694	    36	 100.0	    30	....................................	GTTTGTAACACTTACTGTGCCTAACTGTAG	
      6760	    36	 100.0	    30	....................................	AGAAGCAGTGCGGACAATATCAAGGATATC	
      6826	    36	 100.0	    30	....................................	TTTGATATCGAGATTGTCTGAACCGATTAT	
      6892	    36	 100.0	    29	....................................	TTCTAGCCCACCTTGACCTAATATTTGAT 	
      6957	    36	 100.0	    30	....................................	TTGGGGATATCGCCAGACACTGTTGCAGAT	
      7023	    36	 100.0	    30	....................................	TTCAAAGAAAGGTGCTATTGGCAGAAAAAG	
      7089	    36	 100.0	    30	....................................	CAAAGAAGTATTTGGTGGATATGCACTTAC	
      7155	    36	 100.0	    30	....................................	TATTTCTTTTCATCCTAGTCTCTGCATTAC	
      7221	    36	 100.0	    30	....................................	AAGCTAGTTTCTCTGGGTTTCCTGCATTGA	
      7287	    36	 100.0	    30	....................................	TGAACGAGACCCCGACCTTTGGGTCTGCCG	
      7353	    36	 100.0	    30	....................................	TAACCACCAAATCTAAAGCGTCTATACTGG	
      7419	    36	 100.0	    29	....................................	TAACCACCAAATCTAAAGCGTCTATACTG 	
      7484	    36	 100.0	    30	....................................	TTTTTCGGCTTAGAGCTTAAACGAGCTTAT	
      7550	    36	 100.0	    30	....................................	TGAACTAATTAAGACGATTGGAGAACACAA	
      7616	    36	  80.6	     0	............CC...............T..CCCT	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	  98.7	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   AAGAGAATTTTGGTGTTCGTCAATAGTTTGTCGTATTTTTCTAATGATGAAATTTATCAAATCTTGGAATATACAAAGTTATTACAAGCTGATGTATTATTTTTGGAACCTAGAAAGATTAAAGGTATTCAACAATTTATTTTGGATAAGGATTACATTTTGATGCCTTACAATAACTAGTAATTTGGTAATAAGTATAGATAGTCTTGAGTTATTTCAAGACTATCTTTTAGTATTTAGTAGTTTCTACATGAAGTTGAGTGGAAGAATCATTTTGTTAGAGAGTAGGTTATAAGCTATCTGATAGGTGAGAAGGTAAGTTGATTGGAAAAAGATTTCTAAAATTTTTTCGATATAGCGACAGCACTATTTGTTAAAACGTTGTTATATAAGGCTTTTTAAGGTATAATAAACATAAAAATGGAATCATTTTGAAGCTGAAGTCAGGCTGAGATGAATAGCGCGATTACGAAATCTGGTAGAGAAAAATGACCTACGAG
# Right flank :  TCTCTTTGTAACGATTTTGGGTTGACTTCTCCTTAAACTCATCCTATCATAGAGGAGTCTAGTATTGAAATGGGGGAAGAGACATGTTATACGAATATCCAGCGATTTTTCACACGATTGAGGAAGGTTATCAAATTAGTTTTCCTGACTTTGGTCGTAGCATTAGGGCAGATTCTTTGCCTCTTGCCATGACGAAAGCATCTGTGTTTTTATCACATATTATTAAAGGGTATGAAGATAAGCCTTTACCTGAGCCGACTGCGGTTAGCAGTATTCCTAATGAGGAAGAACTCGTCGTGTTGATTCAAACAGAGCTTGATTAAGACTAAAAAACTCTCGGAAGATTAATTCCCGAGAGTTTTAGGTTTTATTGGCTACATAGACGCCCAGGACGACTAAAATGCCTGCAAAAATTTGTAGCTGCGAGAAGGGTTCTCCTAAGACGACAACAGCAGCTAGAATTGAGATAATGGTCGAAATCCCAATAAAGGATGCTGTTC

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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