Array 1 783791-783523 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046821.1 Vibrio metschnikovii strain 07-2421 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 783790 28 100.0 32 ............................ GACTGACCCAACGGAGCCAGAGGAACCTACTG 783730 28 100.0 32 ............................ TCACTTTTTCTCTTGATTAAAATTCTGCGACG 783670 28 100.0 32 ............................ ATCGAGTCAGTCAAAAAATCAATGCCCGAAAA 783610 28 100.0 32 ............................ CTATCCGATTGATAAGGGCATTTTAGCATTAA 783550 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 99.3 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TCACCTTGTAATAGGCATTGCAGTCTAGATGAAAATGACATTTGCTTAGGATGTTTCAGAACACTCAATGACATTCTCAAATGGCAATCATCAACGATAGCAGAAAGGATTGAAATTCTATCGTTATGTCAAAAAAGAAAAGAGCACTATTCGAGGTAGAGCTTTTTCATTATTAAAAATGTGGTCGGTAATTATTTTAGCGATCATATTAAAGTTCAATTGAAACAAACACATAACAAACGGTTCAAGAGGGACAACCAACGCGTGGCATTTTTATTGTGCGTTGGTTTTTGTGGTTTCGGTGTTATGCGGTAATTTGGCAGTAGCGTTGGTTGCCCCTTAACCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGGATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATAAAGTTTCATA # Right flank : TATTGGTACTTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGAATTTATTAGTTTTTAGTGCAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGGCGAAGAGAGTGCGAATGTACGATACAGTGATTTTTGATTACGGTAATACCTTATGTGAAATGGGTAATTTATCTAATTCGTTGAAAGTGGTTCTTGAATCAAAGTGTGCCGAGCAAATTGGTCATTCGATAGAACGGAGCATTAAAGAGCTGTATAGCCCAGATCAAGTTGAGCAACCTAGATGGATTGATATTTGGGAAAAATCATTCAATGAGTACGGTCTTACGTTTGAGCAATCTATTGGTTTGGAGCATTTGAATCATTTTGTAGATAGTGGTCACATGTATAGTTACTCACTACCACTACTGAGCTCTCTTCAAAAACAAGGAACAAAGTTAATCTTG # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 785985-785656 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046821.1 Vibrio metschnikovii strain 07-2421 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 785984 28 100.0 32 ............................ ATTACCGATTCCGAATGCAGAAGAAGTTATAC 785924 28 100.0 32 ............................ TTTAACTTCAGATTCGTATACTTCGCCTCGGT 785864 28 100.0 32 ............................ ATCACCATCTTCGCCGATATTGCCGACTGATA 785804 28 100.0 33 ............................ TTTATATGAGTTTGATAACTGCAAAAACTCTTT 785743 28 100.0 32 ............................ TCATCAATAGTTTGTTCACGCAGCATATCGCG 785683 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AATTATGATCATGACGGCTCAATATTGTTAACCGCAGAAACACTCCGAGAGCTTCAGGAAAAGAACGTAGCAATATTTGAGTCTAAAAAATCAGCGAAAGCTGTTTACCATAAGTTAGGTATAGCAAATTGCAGGTATGTGAGATTAATATTAAGTATTACACATGAATTTAAAACACGTAATGGTAGCTATCGTTCATCTTGGACAGATTTGAATTCAAAGGTATAGCGTCATAACAAACGCTTCAAGAGGGACTTCCAACGCGTGGCATTTTTACTGTGCGTTGACTTCGGTGGCTTCAGTGTTATGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGGATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATAAAGTTTCATA # Right flank : TATTGGTACTTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGAATTTATTAGTTTTTAGTTCAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAACATGCCTTTTTGATTTCATGCAATGCTAAAAGAGTAAATTAATGGATTGGTTAGATGTTATCCCATCGTCAATGTCGGCTGTTGCCTCAGTAGCTGCTGCTGTCGCAGCTATTGCGTCTTGGCGTGTAAGTCGGAGAGCAACTTCAATTGCTGAGTCGACGGCTTTAGCTACACACCACAGTGCAGCAACTCTTGTTTATGTTCAGGAAGTTAAACAACTAAACGCGCTTATTTCGGATCTAGATAAGTTAGCATTTGAAATTACCTCAACATGGTCAAAGCAACTTCAACGATTTGATAACCCAGACCTTGGTGGTACTGACCCTCGACCTCTTAGGCATGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 821717-821449 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046821.1 Vibrio metschnikovii strain 07-2421 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 821716 28 100.0 32 ............................ TTTTGATGTTGAGCTTCCTACGTTGCCGGAGT 821656 28 100.0 32 ............................ CATCGCCCTTTAAGATGCCGCCCAGTTCAGAT 821596 28 100.0 32 ............................ CCACGTTCTCGGCGAGCAAGTTGTACTCCAAA 821536 28 100.0 32 ............................ GTGAACATTTCGCTAATCTCTTCGATATGAAC 821476 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 99.3 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AATGACTAACAAACATTATCGTTTAATCACATTTGGCAGCTATTTTAATTTGATTTGCATTAATGGCTTATTTATCTGATATTTATCATTAGAATCAATGGGTAAACTTAACTCGATTTAAAAATCAACGGTTTTTCTGTATCAAAGTTAGCTCATTTTACATTAAGTGTTTGATGTTGTTTGCTATTTTACAAAGGTTGCTTGGTGTTTCAGTAGCTGTCTGGAACTGAAATATAACAAACAATTCAAGCAGACCCTCAACGCGTGGCATTTTTATTATGCGTTGGTTTTTGTGATTACGGTGTTATGCGGGAAGTTGGTAGTAGCGTTTCGGGCTACTTAATTGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGGATTTTAAGTTATTGATTTATATCAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGATAAAGTTTCATA # Right flank : TATTGGTACTTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGCGGCATTTTCGTTATGTATTGATTTTATTAGTTTTTAGTGCAATGCGGTAAGTTAGTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGTGCAGGTTGAGTCATGTCGGAGAGATGCTTTATGGATAAATGGTTAAAAGAGATGAATGAGGCATTAGATGAAGCTTTACAGGCTATTTCTTCTGGTGATATTCCAAAGGAAAATATGTATAAGTTAGCTTCAATTTTTTACTCCAAACGTAACCACATGAACAATGATTCCCTGTTTGAAGTAATGACTAATGAAATTGATGAGCGAGTTAAATCAGATTGGTTATTTGATACTGATTCGAAAGAACAGTATAAGTTTCATTTTGTATCATCTTACCTATTTTGTTATGTCGTGGCAGGTAAAATTGACGAGTTTTTGTATGACCAGATTATGAACAGAATTA # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1768256-1767928 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046822.1 Vibrio metschnikovii strain 07-2421 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1768255 28 100.0 32 ............................ TCGTCACTCTCGTAAATGCCATCCACCATCTC 1768195 28 100.0 32 ............................ ACTGAGTAGTTGAGCGCAATGTCGGATCTAGC 1768135 28 100.0 32 ............................ TGATCCAATACGTGGAAATGCTTATCTTTGAC 1768075 28 100.0 32 ............................ TTTCTTGTGACACCATTCTTTTTCAGAGACGC 1768015 28 100.0 32 ............................ TAATTGAACTAAGAAAAGAGCAGGAAAAAACA 1767955 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGCTTTTTGCATGATTTACAAGGTTTAAACTGGCTTGGTCCGTTATCTGGTTACTGCCAAGTGAGTGAGATATTGGCTATTCCTGAACAAGTGCAATATCGAGTGATCTCAGTAAAGCGTAGCAATTTAAGTCAAGCGAAGCTCAGACGTTTGATCGCTCGCGGTAGCATCGATAAAGAAGGTGAAAAACGTTACAAAGTGAAAATGCTTAGCCAAGGTTTTGATAATCCGTACCTAGATTTATTCAGCAGTTCGACCAAGCAGGTACATCGTAAATTCTTTGAGTTTGGTGAAATGCAGCCACTGCCAGTATCCGGAAAATTTGATTCCTATGGGCTGAGTCATACCACTACGGTTCCTTGGTTTTAACCCTATTTTTTTGCTCTTTAAAAATAATATTTAAATACAAATAGTTACAGCAGGTGATTTAAAATAGGGTAAAAATGGCTTTTTTACTCTAACTGCTTGTTGTAACTTATTTTTATGTTGTTATTCTATA # Right flank : AACCATTACACGCTCACCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACCGATGCCAAGTGCTTAAGTGAGCGATCAATGATCACCGTTTACTGATACTGCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTTGTGTGGTTTTGGGATATGATCTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGTTGTGAGGCAGGGAAATGAAGGTGTAGCGATCATCGAAAACTGATCCACTAAATACAATTAGTCAGCATAGACTCCCACCTTGACGGCAATGATGCTTGACGCTTTGAATATTCGATTATTCACCGTGATTACAAGAAAACGTGAGTTTCTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAATACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAATGAATTGCATTTTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : AGTTCACTGCCGCACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //