Array 1 35233-35660 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADMPB010000026.1 Ruminococcus sp. D40t1_170626_H2 NODE_26_length_64684_cov_17.6767, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	===============================	======================================	==================
     35233	    31	 100.0	    35	...............................	CATAGCCACCATATTCGCTGCCAATTTTTCCAATA   	
     35299	    31	 100.0	    34	...............................	CTCTCAACGTTGATAATTCTATTATACCCATGCG    	
     35364	    31	 100.0	    35	...............................	CAGCATCCCTTTAGGTACCGAATACAATCTTGACG   	
     35430	    31	  96.8	    35	....................A..........	CATATACGATAGCGGAAACTCTTTCAAAGGATAAG   	
     35496	    31	  96.8	    38	...................C...........	TGGAATTGATACGTACAAAGCGATCAAGCGCAACCAAG	
     35565	    30	  71.0	    36	......-..TA.AA..A.....A.A..A...	CACTACCATATTTTTTACAACCTCCTTGTGGCAATG  	
     35631	    30	  77.4	     0	...T.T..TTA.G...-..............	|                                     	
==========	======	======	======	===============================	======================================	==================
         7	    31	  91.7	    36	TCACACTCCACTTGGAGTGTGTGAGTTGAAA	                                      	       

# Left flank :   TCAGGTCTTTGGCTCCATTAGTCCATCCCTCTCACGCAAAAACGGAGTCACACTGGACGATGTCCAGGCGCTTAAATCAGCCATTTTGAATATGTTCCAGAATGACGCTTCCTCTGCAAGGCCAGACGGTTCCATGGAAGTAAGTTGCCTGTATTGGTGGGAACATAAAGAAGCAAATCCAGCGGCTAATACGACAAAAATCAGAAACGCTTTTAACATTACCAAAGTAGCTAACAATAAGCGCTTTGAGGATTATAAAATTGAATGGAAATTGGACAACTGTGTCCAGCCAGAAATTATCAGGAACTAAGCTGTTTGGTGCGAAACCTAAGTACACAGAAAAAAGCTCGGGGTTTCGCACCAGCATTTTCAATGATATTGAAACTATTTCTAGCTTTCCCGTTTAGTACATTAACATTAATTCTGGAAAACGACTGACTTTTCAAGAATATTACATATTAATTATGCAATCCTTCTTGAAAAAGAAGATATATTTGCCA
# Right flank :  ACGTCTATAACAGATTTGATAGATGAAATGACTGAAACTAGGTCTTATCTTTTTTTTAGATAAGGCCTTTTTTGTGTTGTGGGAATGACATATTAACTCTGAAAAGAGATAGGGCAATGCCGGCCCGAATTAATGCCTGTGGAGATGATAGATTACAAAGTCTGTGAAGCAGGAAGCCTATTGGTATCAGGCAATGGCAATCATATATTTAACGAGAAAGGAGTGTAGTGATGTTATCTGTTCATCGTATAAAAAAAGCACTAAATCCTGTGCATAATACTATTCCAGAAGATGATTTCCGGATTCTGGAATCCTGGACGGAAACCGATGATAATGTCGATGCCAGAAAAGCAAAAATGAAATATTTTTGCTATAAAATAGCATCTATTGATCCAGAAACCGGTAAAAAGAACATACTTTATAAAGCAATAAAATTTGCGAGAATTGACCGGCTTCCAAAGTCTGCAAGACAAAGTACTTCCTTTATGGATATGCAGACG

# Questionable array : NO	 Score: 2.70
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCACACTCCACTTGGAGTGTGTGAGTTGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:54.84%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-5.10,-4.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-18] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//