Array 1 271032-260868 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTRS01000002.1 Rhabdaerophilum calidifontis strain SYSU G02060 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================== ================== 271031 28 100.0 33 ............................ TCTCTCGCCCTGTCGGTTATGCGCGAGGATCGC 270970 28 100.0 33 ............................ CCATCTGGACCCCTCCGGCGCACCGGGCAGACG 270909 28 100.0 33 ............................ CCCCTCGCGAATATAGATGCGGCGGGGGATATA 270848 28 100.0 33 ............................ CGACCCGCCGATATAAACCTCGGCCTTGATGGC 270787 28 100.0 33 ............................ CCACTTCGAAGGTGGATGACGTGTCGAACACGA 270726 28 100.0 33 ............................ CTCGGTCTTTCCGGACAGCTTGGCTCTTGCAAC 270665 28 100.0 33 ............................ TCTGATCCCCGGCGATAAGCCTAGCGACGTGTA 270604 28 100.0 33 ............................ CCCATGAGATCGGAGGCTCTCGATGATCACCGT 270543 28 100.0 33 ............................ CGAAGCCGACTCTATTTCCCTTGCTTGTGGCAG 270482 28 100.0 33 ............................ CGAACGAAGGTGCCGGCAACGTGGCCATCATAA 270421 28 100.0 33 ............................ CGGCGTGTTCTGCGGGAACAGGGATAGGAGGAG 270360 28 100.0 33 ............................ TGCCCCGTGAAAGCCTCCCATAAGCCCTTCCGA 270299 28 100.0 33 ............................ TCTCCCATTTCGACCTAACCACCCCTTGGAAGG 270238 28 100.0 33 ............................ CGCCACATCAGCAACGGGGTTACGTCCTCGAAG 270177 28 100.0 33 ............................ CCTTCACGACGCGCCCCCGCTCTCGATCAGGAC 270116 28 100.0 33 ............................ CCTTCACGACGCGCCCCCGCTCTCGATCAGGAC 270055 28 100.0 33 ............................ CGCAAGGCAGAGCGGATTTTTCAAAGTTGCTAG 269994 28 100.0 33 ............................ CTCGGGGTCTGGCGTCAGCCATCGCCTGCCGGA 269933 28 100.0 33 ............................ TGATTAGGTCAGGCGATAGGGGGGGAGGCGGGC 269872 28 100.0 33 ............................ CTCGGCATCGACACTTCGCGCTGGCTCAACCGC 269811 28 100.0 33 ............................ CGACAAGCTCGACGAGGCCGGGATCATTCTCGA 269750 28 100.0 33 ............................ TTCTTCCGTATTCCGGACCCGTGGCAGCGAGGA 269689 28 100.0 33 ............................ TCGAGGAGGAGACGGCGACGATCACGCAGCTCG 269628 28 100.0 33 ............................ TTGATAGGCGTGCCCGATCTTTTTCCGGGCGTG 269567 28 100.0 31 ............................ ACCCCGGGGGTCTGCTCGATCATCTCCTCGA 269508 28 100.0 33 ............................ TCAAGAACATCCTGACCCGGGGCGAGATGGCGA 269447 28 100.0 33 ............................ CGAGTTCTCATATCAGTATCCTTCCGACTCCAT 269386 28 100.0 33 ............................ CTGATGCTGAGTAGCCTCGAGCATGATGCGATG 269325 28 100.0 33 ............................ CTCTCGCTGCCAGAAGTCTTCCTTGATACGACG 269264 28 100.0 33 ............................ CCCGCCAGCAGCACGTCGTGCTCGGGGATGAGA 269203 28 100.0 33 ............................ TCGTGCGCGGCGCCGGGTTGATCTCCATCGGCG 269142 28 100.0 33 ............................ CGTATCGGCACGCCTTCCTGGGGCATCTGCATC 269081 28 100.0 33 ............................ CAGTATCCTGGGCCGCTTGTCCCGCCGCCCCAG 269020 28 100.0 33 ............................ TTTGAGGGGCCTCGGCTTTCACAGGAAAGGCGG 268959 28 100.0 33 ............................ GGTGCGGCAATTCGCGCGCGCCCATGCGCCAGA 268898 28 100.0 33 ............................ CACGCGCGATGCGCGTCGCCGCATTCTGGATCG 268837 28 100.0 33 ............................ CCCCTTTTTCGCGATCGCCCGCGCATCCGCCTC 268776 28 100.0 33 ............................ GTAGCCGCTTCGGGCGGCGACGAAAAGCCATGC 268715 28 100.0 33 ............................ TTTTTGCATTGAGCGCAAAAAAAATCCCGGCAC 268654 28 100.0 33 ............................ CCGACGACCAGGCCTTTCCTTCTCGATCACCCA 268593 28 100.0 24 ............................ CACGCTGGACACGCTGGACAAGGA Deletion [268542] 268541 28 100.0 33 ............................ CCCGCCGGAAAGCTTCACATCGACCAGACCGGC 268480 28 100.0 33 ............................ CAAGACCATCGTTGAAGCGGCCACCTGGGAAAT 268419 28 100.0 33 ............................ CAAAAAGAAAAGGATAGAAGATTTCGGCTACGG 268358 28 100.0 33 ............................ CGGATCCAGTGGGACCCCGCATTCGCGCTCGCA 268297 28 100.0 33 ............................ TTTTCGCCCGAACTGAACGCTCCGCCCGATCTG 268236 28 100.0 33 ............................ CCTTGCCAGCTGGGCCAAGGTTTCCTGGTCATC 268175 28 100.0 33 ............................ CCCTGCGCCGCGGCTCGCCGGTTGTCGAGCGGT 268114 28 100.0 33 ............................ CTCGTCGCCTTCGCCACGGAGACCCGAAAGAAA 268053 28 100.0 33 ............................ TCAAAAAGGCCCTGGTCAAAAGCCGGGGCCTTC 267992 28 100.0 33 ............................ TGGTCATCATGTCCCGCGCGGAATATGATGCGC 267931 28 100.0 33 ............................ CCCTTGCTGCGTCTGCGTTATTCCGGTCTTTGG 267870 28 100.0 33 ............................ CCCCGACAGCATCGACACGTCCCGGATTGGCCA 267809 28 100.0 33 ............................ CATCGATCGAGCCGATGGTCGCTTTTGATACGA 267748 28 100.0 33 ............................ TTGCAGCCAGCCTGTCGGCAACATCCCCCTGGG 267687 28 100.0 33 ............................ CTCTGCGATGGGCATCTGCGCGGCAAGATGGAC 267626 28 100.0 33 ............................ CTGCGAAGCCGATATCGAGGGCTTGCGGTGCCT 267565 28 100.0 33 ............................ TTTGGTGAGGCCTGGCGAGCGGTGAGTTTCGGC 267504 28 100.0 43 ............................ TCCTTCTGGGGCATGTGCGCCCGCATGGCGGCGTCGGCAAGCG 267433 28 100.0 33 ............................ TGCCTTTGCGAACAGAAGCCGCGCCCGGTATGC 267372 28 100.0 33 ............................ CTATGACGAAGTTTTGGCCCTGAGCATTGAAAA 267311 28 100.0 33 ............................ CTATGACGAAGTTTTGGCCCTGAGCATTGAAAA 267250 28 100.0 33 ............................ TGCCTTGCCGCCGCTGACGGCCACGGCCTCCGG 267189 28 100.0 33 ............................ TAACGGGGCGATGTCGCCCCGGCTGCCCGTGCG 267128 28 100.0 33 ............................ CCCGGACAAGCCGCGCATCGCGATCCACCACGC 267067 28 100.0 33 ............................ CTTTATTCCATGTTCCGGCTTGAGCGCGCGCGG 267006 28 100.0 33 ............................ TTGAGCAGTGGTCGGACTTCACTTCCGTGGTCA 266945 28 100.0 33 ............................ CGGCAAAGTACCGAATAGGGTGAGGCTCTACAG 266884 28 100.0 33 ............................ CCGACATCAGTAATAGCACCGGGCTCAGCGTGA 266823 28 100.0 33 ............................ TCTCGCTTTTCACGGATCGCAGGGCGCCGGATG 266762 28 100.0 33 ............................ CACGGACGAGATCATCGCCGAACGGATCCAGCG 266701 28 100.0 33 ............................ CGCATGGGCAGTCCTCCTGGGGCTGTCCATGCG 266640 28 100.0 33 ............................ TTGAGCCGAGAATCTGGGGCATCCCCCACGAAG 266579 28 100.0 33 ............................ CCGGCGAGCCGCGGCGCAGGGTTGCCGCCTCGG 266518 28 100.0 33 ............................ CTTTTCGCCCGCGCCACGGCCGCGTCATAGCTG 266457 28 100.0 33 ............................ CCTGGTCTATCGCGTCAAGATCAGCCTGCGTGA 266396 28 100.0 33 ............................ CCTTCATGCCCGCGACGGTGCCCGCATCCATGG 266335 28 100.0 33 ............................ TGTGACGGGAATCTCCCACGCCGAACGGGGAGG 266274 28 100.0 33 ............................ CCTTGGCCCAGCTGGCAAGGCTGCACTTCGGGG 266213 28 100.0 33 ............................ CCGGGGCGATTCTTGCGCGCTCCGATGGAGCGG 266152 28 100.0 33 ............................ CATGCCACGTGCGGCGGCCCGCTTCACGCAAGC 266091 28 100.0 33 ............................ TCGTAAAAGGCCGCGACAAGCGCACCGCGCCGG 266030 28 100.0 33 ............................ TCAGCACGCGCGGTGGCGATTTGTCCTTCCTTC 265969 28 100.0 33 ............................ CGTGCGCGCGCGCGACCCGATGGGATGACGCGC 265908 28 100.0 33 ............................ TTCGTCCTCGCCGGATTGCAGCCGCTCGGCGGC 265847 28 100.0 33 ............................ CGCGAATTCGGTGATGGACCTTTCCGGCAAGAC 265786 28 100.0 33 ............................ CAGCCATTTTCACCTCTCTCTGGTCGTGGCAAG 265725 28 100.0 33 ............................ CCCATGGCTCCGAGCTTATGACGCGGTGCTGGA 265664 28 100.0 33 ............................ CGCGCTTTCCTCGCCGCCTGCGCCCTGACATGC 265603 28 100.0 33 ............................ CGGGGGAGCGTGGAGACGAAAAGGGTAACAAAA 265542 28 100.0 33 ............................ AGATCCGCCCCCGCAACATCAGGGGGGACAGGA 265481 28 100.0 34 ............................ CCGCTTCCTCGACGCTCGCCGGCGGCGGGGGATG 265419 28 100.0 33 ............................ CAAGGCGGGCACTGCGGCCGCAATTAGCGTCAC 265358 28 100.0 33 ............................ TGCCTCGACCATGGTCTCGACATCCGGATATCC 265297 28 100.0 33 ............................ TTGGCGGGAAAGATTCGGGAAGGATTCGGCGGG 265236 28 100.0 33 ............................ TTCCGCGCCGCATCTATATCCGCGAGGGTATCC 265175 28 100.0 33 ............................ TCATGGATTCGGCGCTCTCGCAGGCCCAGGCGA 265114 28 100.0 33 ............................ CTCACCATCGAGGCCGAGGCGACCGACAAGGGC 265053 28 100.0 33 ............................ CTGGTTGCGCACCGCAACCGGCACGCCAGATGC 264992 28 100.0 33 ............................ CGGGGCGCGGTGATGCCCTCGGCCGCCGCCTGA 264931 28 100.0 33 ............................ CGAATAAGTGCAGAAGTAGCGTGCTGGACAGTG 264870 28 100.0 33 ............................ CCGTCCAGAAGGACAAGAACCGAAGTGGTGACG 264809 28 100.0 33 ............................ TTTTCCAAGGGGGCCTGGATGTCGGCATCCGCT 264748 28 100.0 33 ............................ TGCCGCAGTAAAGCTCGCGCGTTCTGCTCGACG 264687 28 100.0 33 ............................ CCGGGGCGGAAAGGGAGCGGATACGGGCGATCT 264626 28 100.0 33 ............................ CCGCGGGGCGCATCCTGAGCTATTCCGATCTTG 264565 28 100.0 33 ............................ CGCGCACATTGCGAGCGTCGCGAAGGATCAGGA 264504 28 100.0 33 ............................ CGATGGAGCCTCCGCATCCTGGCGCGCAGCCAG 264443 28 100.0 33 ............................ CCCCGAGCGTGGGCGGCATCCCGGTTTTCATAT 264382 28 100.0 33 ............................ TCTTTCCAATCTTTCCCAATTTTTCCTCGCGTA 264321 28 100.0 33 ............................ TCACTCGCCAGCGCGGGGAGAAATCGCAGCGGA 264260 28 100.0 33 ............................ TTGATGCAGCGCGTCATGAAGCTTGAAGGCGTA 264199 28 100.0 33 ............................ ACGAGTGCGCCGCCGCGCCGTTCACCCAGGCAG 264138 28 100.0 33 ............................ TCGGCCTGCATTACCATGCCGCGACGGCATCTG 264077 28 100.0 43 ............................ TCCTCCGGCACGCGGCGCACGCCAAGCCGCTCGGCCGCCATGG 264006 28 100.0 33 ............................ TTCAGCATGAGCGCCGCGGGCGAATTGACGGCG 263945 28 100.0 33 ............................ CGTTCGAGAACGTCTCGGAAGTCTATGTTCTCG 263884 28 100.0 33 ............................ CGGGCGAGAAGGCTGAATACCGCTGGACGCACC 263823 28 100.0 33 ............................ CCCCGTGACGCGCCCCGGTTCGGTCTTTACCTA 263762 28 100.0 33 ............................ ACATGCAGCCAGCCCGTGAATTGACCTATGACG 263701 28 100.0 33 ............................ TGTCCGGAATGCCATGAGCTTCTGGCGCTGAAT 263640 28 100.0 33 ............................ CTCGGGAAGCCAAAAAGAGCAAGATGATAGTGC 263579 28 100.0 33 ............................ TCTCAGCGAATACATCCGGTTCCTCCATAACGC 263518 28 100.0 33 ............................ CTCGTCGCCTTCGCCACGGAGACCCGAAAGAAA 263457 28 100.0 33 ............................ TTGAGCTTGCCCCCGATCAACCCGCGACATCGG 263396 28 100.0 33 ............................ CCAGCGATCTTCGTCAGGATCGCCCCGCGGGGG 263335 28 100.0 33 ............................ CATCGGCAAGCGCATGCAGAATGTCTTGTCCGT 263274 28 100.0 33 ............................ TCGCCACCACGCGTGCTGATTTACGGGCCGGAA 263213 28 100.0 33 ............................ TCGCGGCAATGGACGATGCCCCCGCGCTCTGGC 263152 28 100.0 33 ............................ GAGCACTTGCGGAACCAGCATGTGCCATTGAAG 263091 28 100.0 33 ............................ CTCGACAAAATGCAGGCGCCCCAGGCAGAGGAT 263030 28 100.0 33 ............................ CGGCAGATATCGTCGATTCCTCGCACGATCATC 262969 28 100.0 33 ............................ TGCCGCAGTAAAGCTCGCGCGTTCTGCTCGACG 262908 28 100.0 33 ............................ CAGGAATGAGTGAAGTTCAGGCTGGGGGCCTTG 262847 28 100.0 33 ............................ TATTCCGGCGGTGCTGCGTTCGGAAGCTGGTCA 262786 28 100.0 33 ............................ TTGCTTCCCGGTCGCCGGATCGATGGTCTCGAC 262725 28 100.0 33 ............................ TTGGCGTAGAGGCCTCTATCGCACAAATATCAA 262664 28 100.0 33 ............................ CAGCCATGGCATATCCTCACGAGACGAAGGTTG 262603 28 100.0 33 ............................ TCATGCTCTTGCCGGATATCCGGATGTCGAGGC 262542 28 100.0 33 ............................ TGCCGCCCTTCCGAACCCCGATGCTTGCAGCCT 262481 28 100.0 33 ............................ CCGCTTTCTTCTGGCGCATGCGGCGCCCCGTGC 262420 28 100.0 33 ............................ CCGCGGGGCGCATCCTGAGCTATTCCGATCTTG 262359 28 100.0 33 ............................ TTCCCATGCCCTTCTCTGTTTGCTCGCATCTGT 262298 28 100.0 33 ............................ CCGGGACGGGCAAATCCGTCGTGATCGCCGAAC 262237 28 100.0 33 ............................ CACGAAGCGGACACGCTCCTGGCCATGCTCGCA 262176 28 100.0 33 ............................ CGCGGTGCCCGGCCTCGATCTTGTGCGACAAGA 262115 28 100.0 33 ............................ CCTTCATGCCCGCGACGGCACCCGCATCCATGG 262054 28 100.0 33 ............................ CGACGATCATCTGACCGTTCTTGCCCGCCGCCC 261993 28 100.0 33 ............................ TGTCGTTCTGGTTGATGGCCCCCTTGCCGGCTC 261932 28 100.0 33 ............................ CACATCGGCAAAAACTTCATGTCGGAAGCGCTG 261871 28 100.0 33 ............................ CTCTTGCGTTAACGTCCTCCCCGCCCTGAACGC 261810 28 100.0 33 ............................ CCGCAGCCGCGTGAATATCGGCGCCAGCAATAT 261749 28 100.0 33 ............................ TTGTAATATCGATCATTCTACGGTCGATTGCCT 261688 28 100.0 33 ............................ CGCGGTGCGCTTATTCAACCCAGTTGCGTGGGA 261627 28 100.0 33 ............................ CTCGTGGCCTTCGCCACGGAGACGCGCAAGAAA 261566 28 100.0 33 ............................ CCCCAGGCACATGGACAACCTCGCGCCCGGCGG 261505 28 100.0 33 ............................ CCCTTGCAGCATCAGAGTTATTTCGATCTTTGG 261444 28 100.0 33 ............................ TGTGTCGCTGACCTCGCACTGGAAGCAGACATA 261383 28 100.0 33 ............................ CGAAGCACAGATCCTTCGGCGATCCAGGGGGCG 261322 28 100.0 33 ............................ CAAAAAGAAAAGGATAGAAGATTTCGGCTACGG 261261 28 100.0 33 ............................ CACCAATGGGGGCGGGGACGTGACCGGAGCCTA 261200 28 100.0 33 ............................ CCCGGCGGCACTTCGACGGGCGCGCCTCGCTCT 261139 28 100.0 33 ............................ CGACGCCAGCGACGCCAGCCCCAGCGCCACCAG 261078 28 100.0 33 ............................ CGCCCCTACCTGGGGCGTCCCCTGCCTTGGCAT 261017 28 100.0 33 ............................ CAGGACGAGCGCGGCTTCAAGAAGGCCCTGACC 260956 28 100.0 33 ............................ CGCAAGATCTGGCACTCCAGCTACAACGCCCAT 260895 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =========================================== ================== 167 28 100.0 33 GGTTCCCCCGCGCTCGCGGGGATAGGCC # Left flank : GCGGCGGCGCGCCGCGCGCATGTTCCGCCAGCGCGACGTCATCTCGTCCATGATTGACCGGATCAAGGCGTTAATCGGTCCCGCGAACCCGGCGCCAGAGATGCCCTGATGCCGATGGTTGTGATCATCACCCGCGATGTCGAAGCGCGCTATCGCGGCTTCATCGGCTCCGTCATGCTTGAACTTTCGGCAGGGGTTTATGCACATCCCCGCATGAGCCCAGCGGTGCGCAAACGCGTGTGGGAGGTGTTGAGCGACTGGCATGCACAGCTCAACAGAGGTTCGGTGGTCATGACATGGGCGGAAAGCGCGGCCCATGGCGGACTGGGGCTCGCGGCCTTGGGGGAGCCCCCCAAGGACATTGTCTCGCACGATGCCATGCTGCTGGTTCGGCGTCGCATTCGAACACCGAAAGACACCCTTCAGACAACCGGTTGACAATCCTCTGCGGTTGCCCGCTGTTTGACATTGTGAATTTATTCAGCTACTTAGCTCAAAGA # Right flank : CTTTGCGCCCGCGCTGGCGTCGAGGCCGTCAATGCACTAACATTCCATCCGGACCACTTAGTGGGGGCCTATCACTTCCCCGGCATAGGCGGCGACGTAGGCCGCGATGATCTCCGGCGTGGCGGGCAACTCGCCGCCCCACTCGCGGAAATGCTCAGGTCATCGGACGAGCGCAACATCGACTTGACTTCGTAGCGTCCGACACGCGCCACCAATGCTTCGACACGGCCATGCGGAAGCAATAGGCTCCGTTGCGACGCACAAGTCGAGGGACAAGCGGCATGAATGACCTCATCTGGCCCGGTTTCTGGCCCAGGAGGCGACGAACCGATTTCCCTTGGAAAAATAGCTAAGCATATGAAATGACTTAGCAAATCAATGGCGGAGACGATGGGATTCGAACCCATGATACCCCTTTCGAGGTATGCTCATTTAGCAAACGAGTGCCTTCAGCCTCTCGGCCACGTCTCCGGCCGGCGCGGGCGCCGGGCCCCGCTCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGCTCGCGGGGATAGGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //