Array 1 2-809 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFR01000372.1 Acinetobacter baumannii strain ABBL067f contig-5000018, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 62 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 122 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 182 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 242 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 302 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 362 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 422 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 482 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 542 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 602 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 662 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 722 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 782 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : AG # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4-1466 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFR01000087.1 Acinetobacter baumannii strain ABBL067f contig-1000071, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 64 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 124 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 184 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 244 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 304 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 364 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 424 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 484 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 544 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 604 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 664 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 724 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 784 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 844 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 904 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 964 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1024 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1084 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1144 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1204 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1264 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1319 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1379 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1440 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 97.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTG # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4927-9457 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFR01000185.1 Acinetobacter baumannii strain ABBL067f contig-2000075, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4927 29 89.7 31 ....G.......CC............... TATTGTGAGCACCTTGATTGCTGTGCGCTGC 4987 29 89.7 31 ....G.......CC............... ACAGCGGGAAACTTGAAAGTCATTGCGAAAT 5047 29 89.7 31 ....G.......CC............... GATTGCCCCCTGAGGAAACTGTATAAAGTCC 5107 29 86.2 31 ....G.......CC..............A AACACCAACTAAGCCATTCCCTATTCAAAAA 5167 29 86.2 31 ....G.......CC..............A TGAACTTTTAATGGATGCATGCGCCGCCCAC 5227 29 86.2 31 ....G.......CC..............A CGAACAACGATAATTTGGAATACACGCTCAT 5287 29 89.7 31 ....G.......CC............... CAGGAGAAAGATCGTTCAAAAGCTCAAAACC 5347 29 89.7 31 ....G.......CC............... GAAAGTTTTGATATCCACTCTGCTGTTTCAA 5407 29 86.2 31 ....G.......CC..............A GATGGTAAGAAAATTATTGAGTCTGGAGACA 5467 29 86.2 31 ....G.......CC..............C GACAGTCCAGTTGATCAGATCTTGATTAGAC 5527 29 86.2 31 ....G.......CC..............A ATGACATGGTTCAACAATTAAATTCATCTCA 5587 29 86.2 31 ....G.......CC..............G TTCTTTTCTGCAATATGTGCCATTAGGTATT 5647 29 86.2 31 ....G.......CC..............A TTTTAGATGAAACAAAAGATAGCAGGATTAT 5707 29 86.2 31 ....G.......CC..............A GACCAAGCGGATTGACCGTATTGATAAATAA 5767 29 89.7 31 ....G.......CC............... TCTGCAATACAAATCACTGGATCAGCCAGGT 5827 29 89.7 31 ....G.......CC............... GAGTCTTTGATTTCCCAAATATTACTTGAAA 5887 29 86.2 33 ....G.......CC..............C CTGAAAAATTTCACTGTGTCCATTTCGTTATTA 5949 29 89.7 31 ....G.......CC............... ATGTCTTTAAATTCTGAAAAAACACTTGTTC 6009 29 86.2 31 ....G.......CC..............G AAAAAATTGAAAACTTTTTAGAAGTAAATGA 6069 29 86.2 31 ....G.......CC..............G CCACACATGCCTAAAAACGCAAGTGCGCTCG 6129 29 86.2 31 ....G.......CC..............A TTATCAGATAAGCCTTTTATGAATGATCGTT 6189 29 86.2 31 ....G.......CC..............A TTAGCTATTAGCTTTTTGGCAACAACAACAG 6249 29 86.2 31 ....G.......CC..............A GTTCATGAAAACAGCTTTAAAAAGAAAGCAC 6309 29 89.7 31 ....G.......CC............... CCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 6369 29 89.7 31 ....G.......CC............... TGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 6429 29 89.7 31 ....G.......CC............... GGTACGACAACTACGAAAAGCTGAGCAAAGT 6489 29 89.7 31 ....G.......CC............... CAACTTAAATGGATGCTCCCCGCGGTGAATT 6549 29 89.7 31 ....G.......CC............... TGATTGCTAGACGGATTTTTAGGCAGATCAT 6609 29 86.2 31 ....G.......CC..............G AGTTTAATGCGCTATATGGCGACGAGGATTT 6669 29 86.2 31 ....G.......CC..............C ATGCAATCGCGTTGATTACCGCAGCTTCGAA 6729 29 86.2 31 ....G.......CC..............A TGAGCCGCAACCATACGGTCTATGACTTCCA 6789 29 86.2 31 ....G.......CC..............A TAGCGCCCTGCTCTATGTTGTCACTTCCGAA 6849 29 89.7 31 ....G.......CC............... CCAAGTGAATCGGCTCCTAATGCAAATGACC 6909 29 89.7 31 ....G.......CC............... GAAAACCAATATGCTGCCTAATTGCCATAAG 6969 29 86.2 31 ....A.......CC..............G ATCTGCGTCCATTTGTACTTGCTGCGGGTGC 7029 29 96.6 31 ............................A TATACAGCACCGCTTAGTGCGACGCGGTCAT 7089 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 7149 29 96.6 31 ............................A TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 7209 29 96.6 31 ............................A GAAGGCCCGTAATTTAACTGTAAGCCGTGGT 7269 29 100.0 31 ............................. CTTCCTGAGTTTTAATCCCATTTGCCTTACA 7329 29 93.1 31 ......T.....................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 7389 29 100.0 31 ............................. TCAGGGAATTATCGTGAAACTTTCATTGACT 7449 29 100.0 31 ............................. GCACCAGCTGCTGGCTGGTTGAAATCTGCAA 7509 29 96.6 31 ............................A GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 7569 29 100.0 31 ............................. GTTTCAAAAGCTACACCATCAAAACCATTGC 7629 29 100.0 31 ............................. ATTTAAGTAATAAGTTTAATAACGACCTAGT 7689 29 96.6 31 ............................A ACACGTTCTCTATATCGCTGTTTGCGGTCAT 7749 29 100.0 31 ............................. TCAGTTGGATATGCCTTTGATACCAAGAAAC 7809 29 96.6 31 ............................G CCTGCAGACACGGATTTACGCAGCTGATCGA 7869 29 96.6 31 .........................C... AACCAAACTATGTCATCGATCGGAGATTTCA 7929 29 100.0 31 ............................. TAAAATAAATGCCTGTGGTTTTTTCTTAACT 7989 29 96.6 31 ............................A GTTTCCGAAGTTGAATTACACTCGCCAAGTT 8049 29 100.0 31 ............................. AACACAGTGATTTGATTACCTTGAGCAACCC 8109 29 96.6 31 ............................A TCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 8169 29 100.0 31 ............................. CATCCACCTTTGATGAAACGGATCCACGCAA 8229 29 100.0 31 ............................. CTTGTGTGACGGCCTCCACTCCAGATCCCGC 8289 29 100.0 31 ............................. TAAGCTTCAAAAATAGCCATTGATTATAAAA 8349 29 100.0 31 ............................. GACAACTTTCCACGGCAATCAGGGCTTTCCA 8409 29 100.0 31 ............................. AAAGATGCACGTGGCCTAATGCAAGTTATTC 8469 29 100.0 31 ............................. TTAAAATTAGGTGCTGAGTTACCACGGCTCA 8529 29 100.0 31 ............................. AAACCAAGAACTTGAAGATTTTGATGCTTAT 8589 29 100.0 31 ............................. AAAAATAGTGTGTTAATTATTTATGATGAAA 8649 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 8709 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 8769 29 100.0 31 ............................. GCAGCTACTCGACATGTTGGTAGGGCAGATG 8829 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 8889 29 96.6 31 ............................A GATTGAGGCGATTTTTATCGCGGACATTGCC 8949 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 9009 29 100.0 31 ............................. CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 9069 29 96.6 31 A............................ TATTATTAAACGGGAAAAGTATATTCTTGCT 9129 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 9189 29 96.6 31 ............................A TCATCAATAAGTTGGCCTTGATTTAAATAGT 9249 29 96.6 31 ............................A GATACAAACGAGTTCGCATCTCGACCAGAAG 9309 29 96.6 31 ............................A TTATCCAGATAAAACCATATCTACAAAGTGG 9369 29 100.0 31 ............................. CAACCTGAACACAGACATACATGTTCTATTG 9429 29 86.2 0 ...GC...................AT... | ========== ====== ====== ====== ============================= ================================= ================== 76 29 93.2 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //