Array 1 96108-95812 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB904661.1 Streptomyces vitaminophilus DSM 41686 A3IGDRAFT_scaffold_22.23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================================== ================== 96107 26 100.0 38 .......................... GCATCCTGCCCGGTCCACCCCTGGTCACGCTGGAAGTC 96043 26 100.0 39 .......................... TTTGACGGCTCATCCCACACGAGCACAGACACGCTAGTC 95978 26 100.0 50 .......................... TAGACCATGGTCATGCCGACCCGGTCGATGATGTAGTAGTTCCGGAAGTC 95902 26 100.0 39 .......................... CCTTGTTCGTGCTACCACAGTGTCTGGGGATTCGCAGTC 95837 26 96.2 0 ...............C.......... | ========== ====== ====== ====== ========================== ================================================== ================== 5 26 99.2 42 CTCATCAGCCCTGGAGGGTTCGCAAC # Left flank : GTGT # Right flank : GCGGGGCGCGGTGACAGCGACACCGCGGCGGCCACCTGGCGGTCCTCATCAGCCTTGGAGGGAGAACGACCACTCACCTTGCGCGCGGCAGCGTACTCCGCAGTTCTCATCATCCTTCGCAACGCCAGGCCGAGGGCGGCGATGCCGCGCGGTGTGCCGGCGGCCGGCCGCAGGCAGCCCTTCTCGAGCCCGCACGGCACGGGAAGAGACCCACGCCGCTTATTACCTGGTCCTCGACGGCGCCCCCCGGATGTCAATCCTGCGCCCTGGACGTGAAGCGGAAGCCCCGGCTGGTGCAGCGGCGTGTGGCCCGTGACGGCCACGGCAGCTACGACTTCGGGTACTTCGGCACACCGGGTGGGAAGGGTGTCGATGTCGGCGAGGTGCTGCCCGGCCGGTACACCGTGCTTGTCTCCATGAGTACGGGAGGGGCCCTGTTCACCAAGGAGGTCTGCAGGAACACCCTCAAAGGGCGTTGACGGGGCACGCGGCCGGTGGTG # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.06, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCATCAGCCCTGGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [25.0-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 736-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB904657.1 Streptomyces vitaminophilus DSM 41686 A3IGDRAFT_scaffold_19.20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 735 29 100.0 36 ............................. TGGCACGTCAGCACGCACCGGCGTGGCGGACGGCGT 670 29 100.0 35 ............................. CGGTACTCGGCGTCGGCCGGGTCGCCGACGCGGAC 606 29 100.0 34 ............................. TCAGCCATTGGGGGTCCTCTCGTCTCGGGCCGGG 543 29 100.0 37 ............................. AGCATCGGCATCTGCACAACCCGCAGTGTCTCCTCCG 477 29 100.0 37 ............................. GAGGGCCGCGGTGGCGCGCAGCGCCCCAGCGTCCTCG 411 29 100.0 37 ............................. GGGTCCGCGCGGAACAGGCCGCGCGGATGCTCAGCAG 345 29 100.0 36 ............................. GACGGCGACGCGGGATGCGGGTGCTCGTGCCCCACC 280 29 100.0 34 ............................. GCTGTCACCGACACCTGGATGGGCGGCTGGGCCA 217 29 100.0 36 ............................. CCGGTCTCAGACCGGTACGGCCTCGCCGCCGCCGCC 152 29 96.6 30 ............................G AGTCAGGCATTGCTCCTCCGGGTGCCACAA 93 29 100.0 36 ............................. AGCTCCGCGCCGCTCGCCCAGGTGGTGAGCTGCTGT 28 28 93.1 0 ..T.........................- | ========== ====== ====== ====== ============================= ===================================== ================== 12 29 99.1 35 GTCCTCATCAGCCCTGGAGGGTTCGCAAC # Left flank : CACCACCGAGCACTCAAGCGCAAGGTCAGCTATGACGAGCTTCTGCACCTGGAGGCCTTGAAAATGGTTCGGTTGTGCCTGGAAGGAAGTCCCTACAAGCCGTTCCGCCCCTGGTGGTGACCCGACCTGTTTGCCATCCTCGTCTATGACACCGCCGTTGAGCGCAACCCGCGAGTGCTGCGCACCTGCCGCAAGTACCTGCACTGGGTACAGCGCAGTGTTTTCCAGGGGGAGCTCTCCGCTGCGCAGTACCGAGCCCTGTTGGCCGAGCTCAACAGCGTCATCGACCGCGACCAGGACAGCATCATGGCCTACGCCACAAGGTCTCCGGACATGGTCAACACTGCCTGCCTGGGCATCGTACTGGGCAACTCCAGCGATATCCTTTGACCCCGAGCCAAACCGTGCTGACCTGCGCTGATGCACAACCGGCGGATCGCCGCAAAATCGGCCGTGATCTCGAGCCACGAGATGGACGTGACCTGCGGCTTTACCATCGG # Right flank : A # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCAGCCCTGGAGGGTTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 9301-10622 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB904657.1 Streptomyces vitaminophilus DSM 41686 A3IGDRAFT_scaffold_19.20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 9301 29 96.6 34 ...............A............. CTGCTCAACTGGGCGAGAACCGTAATGATTTCAA 9364 29 96.6 34 ...............A............. GCGCAGCCCCGGCAGCGCACCTCCAACTGAACCG 9427 29 96.6 36 ...............A............. CCACCCGTGTGCCGGCGCTTCCACGCGTCGATGATC 9492 29 96.6 34 ...............A............. AGGGCCAGCCCTAGGCTCGCGACCATGACGATGA 9555 29 96.6 36 ...............A............. CGTGCTGGAGATCCGCGACCCCTCCCCCGTCCTCGG 9620 29 96.6 36 ...............A............. CCGGGCCCCGGCCCGAGAAGAGTCCGGCACCACCAG 9685 29 96.6 37 ...............A............. AAATGGTCCCTGTACACCCGCATGTCCGGGTGCACGT 9751 29 100.0 33 ............................. CTGGCTCGCGCGCTTGAGCCCGACCGGGTGGCG 9813 29 100.0 39 ............................. CATTTCGCTGAGGCAAGTTCGGCATCCGCCGATTCCCCA 9881 29 100.0 34 ............................. GCGCCCCGGTGGTAGATGGTCAGGCGGTCCGCGA 9944 29 100.0 36 ............................. GTTGTCCTCACGCCGTACTGGCCCGGTCCGTTACCG 10009 29 100.0 36 ............................. ACTGAAGTAGAAGAGGGCACGGACGCGTACGGCGAG 10074 29 100.0 36 ............................. TGTTCCGCACGGTTGAACTTCTTCCGCTCCGCTTTC 10139 29 100.0 36 ............................. AGGAGCCGGGCGAGGATCTCCGCGTCCTGCTCGCCG 10204 29 100.0 38 ............................. GCGTTCACCAGACCGGTGCGGGACCGGCGAGGCGGCCG 10271 29 96.6 35 ..............C.............. ATGGTGGGCGACCTACCAACGATCGTCACCGAGTA 10335 29 100.0 36 ............................. GGGCTGATCGGCTGCCACCGGGTCGCCCTGCACGCC 10400 29 100.0 35 ............................. GGGATCAGGCGGGCCGCGCGGGCGGCGGACAAGGG 10464 29 96.6 36 ....C........................ AAGACCGTGACGAAGCTGGTCGCGGCCAGGCGTCTG 10529 29 100.0 36 ............................. AGACGCTGACCGAGCGGGTCCGCGACCGGGCCGCGC 10594 29 79.3 0 ...............AA....A...AGG. | ========== ====== ====== ====== ============================= ======================================= ================== 21 29 97.6 36 GTCGTCATCAGCCCTGGAGGGTTCGCAAC # Left flank : AAGTCGTGCAGCCGCCGGGCCAACTCGGCGTTCTGGCTCCCCAGCAGCCCGTACACCACACCCTGAGCCGGGCCGTGGACCTGCTCCCAGGGAAGGCTCGACACATCGGCTGTCACATCCACCCTGACCCGCACGACTCCCCCTACCACCGCTCTAGCGCGACGCCGGCAGTGTTGCTTTTGAGTGTGATCACCAACGAGTCAGACCCTACGCGGGGAGGCCTGCGGCTACGCGACTTCTACGGAAAGTCATCGAGTGTGAACTTCGTGTGATATAGACCTGGGATGTTGGCGGATACCGCCACCGCCGCCACGGGGTTGAAGAGAAGGGTGGGGATAGTGAACGGGCTCCCTTCCGCCGGACGGCTCTGCGCGGGCGTCCCATCACGTTCTTCCCGCCGTACGCGTTTGACCTGCGATGTTGCACAACCGGCGGGTCGCCGCAGAATGCGCCTGGAGGTGCCCAGTTGGCCATGGTGTGACCTGCGGCTTTACCCTCGG # Right flank : CGGGGCGAACGCCCCCCGGGGGATCGCCGGCGACCCACGTCCCTTCCTCCCCCCAGCCCACCCACGAGGTAGCGAGTTGCATATTTCTGCAATTAGCTACATAGTGAGATAGTGAGCAATGCGGGGCGTGCCGAGGCGCCGTCCGTGAGTGAAGGGGGGCGCCCGTGGGCGGGGAGTTCGGCGCCGCGGTGCGGGAGCGGGTGCGCAGGGCGCGGCTGGCCTGGGAGGAAGCGGTCGGGGGCGGGGACGTCTTCGAGATCGCCGTCGCCCGGGGTGAGCTGGACGAGGCGCTGTGGGTGGCCCGGGAGCACGGGGTCGAGACCGGCCCCGAAAGGGGCGGGCGGTCCGCGGACGGGGTTGCCGACGAGGGCCTGGACGAGTAGGAGCTGAGGTACGGATGCCGGTGCCGTTGTACCAGGCGAAGGCGGAGTTCTTCCGGATGCTGGGGCACCCGGTGCGCATCAGGGTGCTGGAGCTGCTCCAGGGCGGGCCCATGGCGG # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCATCAGCCCTGGAGGGTTCGCAAC # Alternate repeat : GTCGTCATCAGCCCTAGAGGGTTCGCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [35.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 23118-21858 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB904685.1 Streptomyces vitaminophilus DSM 41686 A3IGDRAFT_scaffold_44.45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 23117 29 100.0 32 ............................. GTCAAAGGCAAGAGCGTGAACCCCTCCCATTC 23056 29 100.0 32 ............................. GCCCGGCAATCAGCGCCTCAAGGAAAGCCAAT 22995 29 100.0 32 ............................. TCCGGGGTTGATCCGACCGAGGTGGCTCGTCG 22934 29 100.0 32 ............................. CTAATCCGTACGCGAATAATCCATCTGAATAC 22873 29 100.0 32 ............................. ATTATCAGGAGTCAGAGAGGGGATGTGGGCAG 22812 29 100.0 32 ............................. GCCATGGCGTCGTGGCGTCAGCCCCGGTATCG 22751 29 100.0 32 ............................. TCCCACCGAGATCACACTGCCTGCCACTGGCG 22690 29 100.0 32 ............................. TCCTCATCCTGACACCCGACGAAAAGATCGAG 22629 29 100.0 32 ............................. AGCAACGCGGCCGGCCGCTGCAGCGGCACCCA 22568 29 100.0 32 ............................. ATGAATAAGGAATCGAACGAGATGACAGGAGG 22507 29 100.0 32 ............................. GCGGCCGGGCCTCGGCAGGGATCAGGACGTAG 22446 29 100.0 32 ............................. GGCAACGTTGTGGACAACGACGGACGCGTGGC 22385 29 100.0 33 ............................. GCGTTGGCCACCTCAACCGGCTGTTCAACCTCC 22323 29 100.0 31 ............................. CATTGGCCCCACGGGGCAGTTATCACTACAC 22263 29 100.0 32 ............................. ACCTCGAGGGGGATCATGATGGCTCGTACGGT 22202 29 100.0 42 ............................. GGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT 22131 29 100.0 32 ............................. GGGGCGTAAACCACACAGGCGGGCGTACCGAA 22070 29 100.0 32 ............................. ACCCCGCCGTGGAGTCAGCGCAGCAACATGCA 22009 29 100.0 32 ............................. GGTAGGTGGTGGTCCTGGAGAGGAACCAGCGT 21948 29 100.0 32 ............................. CCTGTCGAGGGTGGAGGGCCTGAAAGAGGGAC 21887 29 86.2 0 ...G.............C...T..C.... | C [21872] ========== ====== ====== ====== ============================= ========================================== ================== 21 29 99.3 33 GTGTTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : GCTGGACGCACTTCCCTTCGACCTGGTGTGGGCGACAACGTGGGAGGAAGAAGCAAACATCTTCGTCGCGCCAGTCCTGGGATTACCCGAGTTGCCTTTCATTCCCTGGCCCTCGCCGCGGCCCGAGCCCGGGGGCGGTGTGTTCTGGAAGACACCTGAGATCGTCGCGTGGGCGAAAGGCCGTCCGTTCGCCTGGATCGATGATGAGATCACCGAGGCGGACCGTACCTGGGTGCGCGAATACCACGATGGTCCCGCCCTACTGCACTGGGTCGACCCGCGATGTGGCCTTGCCATCGACGACTTTGCGGCGTTGACGGCATGGGCGACTGGTCTTGACTGACTCCGCAGCCGGTCGGCAACTGGCTGCGATACCGTCCTGCTTGATGGTTACGGGACCGCTTCCAGGTGTCGCGTTCTGGGAGAAAGGCGAAATGTCCGTCTCTCGGGAAGTGGGTAAGAACGACGCTCCTCGCCGGAAAACCCGCAGGTCAGCTAGC # Right flank : CGTTCCCCGGCGGACGGGGTGGCGTGGAAACGCGACGGGGCCGGTCCGGGTACCCGGACCGGCCCCGTCGGGGGTGGCTCAGTGGCTGGGCTTGAAGCCGCGTAGCCGGAGGCTGTTGCTCACCACGAACACGGAGGAGAAGGCCATCGCCGCTCCTGCGATCATCGGGTTGAGGAGCCCGGCCGCGGCCAGTGGCAGGGCCGCGACGTTGTAGGCGAAGGCCCAGAACAGGTTGGACCTGATGGTGCCCAGGGTCCTGCGGGAGAGCCGGATGGCGTCGGCCGCCGCCCGCAGGTCGCCGCGGACCAGGGTGAGGTCGCCGGCCTCGATGGCGGCGTCGGTGCCGGTGCCCATGGCCAGGCCCAGGTCGGCCTGGGCGAGCGCCGCGGCGTCGTTGACGCCGTCGCCGACCATGGCGACGCTGCGGCCCTCGGCCTGGAGCCGCTTGACCACGTCCACCTTGTCCTGGGGCAGCACCTCGGCGATGACCTCGTCGATGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 135673-135461 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB904702.1 Streptomyces vitaminophilus DSM 41686 A3IGDRAFT_scaffold_6.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 135672 29 100.0 32 ............................. CAGGCGGACGGCCCACGTGACCCGACGCCACC 135611 29 100.0 32 ............................. TTGATTGTTCACATACACCGACTCCTGTAGCC 135550 29 100.0 32 ............................. ACCGAGGCGGAACCGGGCGCTGGAATGATCGG 135489 29 93.1 0 ........................CC... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GCCGCGCCGGCACCGGCACTCGCCCCGGTCAACCTGATGTCGCTCCTCGGGCTGCGCCGGGCGCTGCGCGGTGCCCTGGTCGGGCACTTCGCCTTCCTCGAGGTCACCTCGTCGCCCGCCTCCCGCCGCCTCGCCGCGGCCATGAGACGCACCGGAGCCGGCCCGGCCGCCGAACACTTCTACACCGAGCACGTGGTGGCGGACGCCGTCCACGAACAGGTGGTCCGCCACGACGTGGTGGGCGGCCTGCTCGCGGACGAACCAGCACTCGCCCCCGACGTCACCTTCGGTGTCGCGGCCACCGCCATGCTGGAGGACCGGCTCGGTGACCACCTGCTGACGGCGTGGCGCACCGGCCACAGCGCACTGCGGGAGGACGCCCGGCACCCCGCCACCACCGACTGACGCCGGCCCCGCCGGCACGCTGGGCGTGTATGGTCGGTTCCGAGAAACTGTGCTCGCGGTGCTGCACGCTTGAGTGAAGCAGCAGGTCAGCGAGC # Right flank : CGTTCCCCGCAGAGCGAGCGTTCCCCCGGCGTGCCCCCGAACTCCTGCACCGGCACCAGTGTGAACGCGTGCGCAGAGCCCTGCGGGGCGGGCGTGGGGGACCTCCCCGGCCGCCCGCCCCGAACGGCGGATGTTCACCGGCCGACCCGCCGACGGGTCACCGGAGTGGGGCCAAGTGTTCACGAAGCGCTCGTAGCGTCCGGGGCGCACCATCCGGAACCTCCCGGATGCCCCACAGAAGGACGCACCCATGCACCGCTTCCGTCTCGCCGCCGCCGCGCTCACGCTGAGCGTGGGCCTGCCCCTCGGTGTGGCTGCCGCTGTTCCGGCCTCCGCTGCCTCCGGCCCGATGGCGTTCGAACCGATCAAGAGCTCGGCCTACCAGCAGATGTCGGACACCTGGACCGTGCCGCTGGTCGCCCCCGAGGGCTTCACCCAGGAACTCGTCGCCGACGAGACCGTCCTGGACATCTACGGCGGCACCGCCGACGACCTCACCG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 428-14 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB904732.1 Streptomyces vitaminophilus DSM 41686 A3IGDRAFT_scaffold_87.88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ====================================== ================== 427 27 100.0 37 ........................... GCGTAGACCGAGGCGTGGCCGCCCTTGATCCGGGAGC 363 27 100.0 38 ........................... GCGACCCTCGCCGCCTCTTGTGCCATCGCCGCCCCCGC 298 27 100.0 38 ........................... CACACGGGGAGGTAGCTGACGACGCGGTGGGGGCCAGT 233 27 96.3 38 ..............G............ AGGCGCGGCGGACCGTGGCCCGGATGCAGCTCCAGGGT 168 27 96.3 36 ...................A....... CAGGTCCGTCACGGCGCCTGCATGATGCCCGCAAGT 105 27 96.3 38 ...................A....... CTACCCGATCAAGGGCACTCTCGATACTGGCTTCCCGT 40 27 96.3 0 ..............T............ | ========== ====== ====== ====== =========================== ====================================== ================== 7 27 97.9 38 CGTCATCAGCCCTGAAGGGTTCGCAAC # Left flank : CGTTCCGTTCATGTACGGCTGCCCGGTCAGCCGCTCCGGCCCCACCTGAAGCGCGCGGGCCAGCCGCGTCAAGGCACCCGGCGACGGAGACCGGTCGCCGCTCTCGTACTTCTCCAAGAGGCTGGCCGAGATGGCGACGCGTCCAGCGAGTTGCCGCACCGTCAGCCCGCGAACCTTCCGGACCTCGCGAATGCGCTGCCCGACGTGTGTGCTCATGGCACCCCCAACATGGTGGATTCGGCTGCCAGCGTACGGGCGGGAGCGACCCTCGGAACACGGGCACGCTTGTGCGATTCCTTCAAGGTGCCTGGACGTGAAGAAGTGCCCCCTCGTCGCCCGTAGGCGACGAGGGGGCATAGCTCATCGGTTCAGGCTTGCCGCCCGCTGCCATCGTCCGTCACGGCTGTGAACTGCGTAGATGCACAACCGCCGGAACGCTGCAAAACTAGACGCCAACGACCGCCGCATGGCCCGTCCGACCTGGGGCTTTACCCTCGGGC # Right flank : CGAAGCCGCCCCGC # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCATCAGCCCTGAAGGGTTCGCAAC # Alternate repeat : CGTCATCAGCCCTGAAGGGATCGCAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.10,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //