Array 1 506277-505405 **** Predicted by CRISPRDetect 2.4 *** >NZ_FSQP01000003.1 Mycobacteroides abscessus subsp. abscessus strain 1099, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================================================================== ================== 506276 28 100.0 33 ............................ GAAGAAGATCTTTTGCAGGCTGACGTCGCCCGA 506215 28 100.0 33 ............................ GCTCGCCTGACCAACCCCATCAACGACGAACGG 506154 28 100.0 33 ............................ GGAGCCGACGGCGCTGGCGGCCGGCAGCGAAGA 506093 28 100.0 34 ............................ CACCACCGCCCCGCTGTCGCCGATCTCGGTGCGT 506031 28 96.4 33 .............G.............. GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 505970 28 96.4 33 ........A................... GAAGGCGCAAGAGAAGTTGGGCACCCTCGGTAC 505909 28 96.4 33 ........A................... GGTGAGGGCTGTCGAGGTCGCCGGCGGCACCGT 505848 28 92.9 33 ..C..........G.............. GTTGGAACAACTTTCTGGATTCTGTCCCACCCT 505787 28 92.9 32 .............G..T........... GACCGTCGCCACCAGGTGCGAGACGCTCACCC 505727 28 96.4 34 .............G.............. GCTGCCCGCGCGCCGACTTCCCGGCGGCCGTCAG 505665 28 96.4 32 .........................C.. CCGAATCGGCGGCCGCGTGTCTGTCAGCGCCG 505605 27 82.1 33 ...T..........-......G..TT.. CCGGGTTCGCCCGGCCACCCGCACCGGTTCGCC C [505603] 505544 27 82.1 84 G...........T.-.........TT.. CGTCAGCTTGCCGTTCGCGTAGGCGAGCCACTCGCGTGCGCGGGGTGTTCCCTTGCCCGCGATCCGTGTCGGCCGCACTTACCG 505433 27 82.1 0 G..T........T.-......G...... | T,T [505408,505411] ========== ====== ====== ====== ============================ ==================================================================================== ================== 14 28 93.9 37 CTGCTCCCCGCGCAAGCGGGGATGAACC # Left flank : GAGAGCCACCGCGGCAATGATGCCCGCGGCGGCGATCTTGAGCGCGTTTCTGCTGGTCACGGTTTCGATTGTTCCAGACGATGTCGAACGAACCGCCGAATGCGATGTCACGTCCCCCGTCCGGATGTCTTGAGCGGGAGCCGGATTCATGGACGTACCGCCTCGGCGAGGCGCCGCTCCACGGCGCGGAGGTCATCGATCGCAGCGGTGAAGTTGGCCCCGTCGGTGCCGGTGCCGTGCGCGTGTTCCAGGAGCTCCACCACGCCGCGCAGACGCGTCTGTGCGCTGCGCACATTGTCGTGGATCGACGTCGCCGGGCTGGTGATCAGGTCGCGGTAGTCGGTACTCATGCCCGACACGGTGCACGCCCCAGCAGCGAGGTGACGCCCGCGGCGCGGGTTCGGCAGGTGCGCTCGCCATGCTCGCAGGAGGTGGCGATTGTTAGCTTGTCACAGGTGTCAAACTGGGCACTCGTGCTGTATCGTCCCAGGTCAGGAAGT # Right flank : GTTTCCATTCTCTGTTTTGGAGAATGTTTCCGCTGGTAGAGGCGCTGCGGTGAATGCGCGTCCTCCTTGACGGCGTTCGCACAGATGTGCACAATCGGTTCAAGTCGCGATCCGAGCGCGACGGCGGCCTCCGGGTCGTTCAGGGCACGTGCCGCATCCGCCGGACACGCCGCTCAGCTCCCGCCCTCGGACCAGGGACTGCTGAGGGTGCACCCGGCATCACCTTCTTGTGATGCCCAGGAGTGCGCCCATGAGTGCCAACATCACCCTTCTCACCATCGACGCTGCTGCTGCGCGCCGCGGCGTTCATCACTCGACTATCCGCCGCTGGATCCGCGAGAGCCTCCTCCCGGCTACCCGTCTGAGCGACGGCACCCTCCGCGTGACCGCGGCCGACCTCGACGCGGTTCGTCCGCCGGAACGGGTGAAGCCCCGCTCCGGTGACACCGTGTCGACCCTGCGCGCGATCGTGAACATGACCGGCGGCGCGATCGAGGACC # Questionable array : NO Score: 5.49 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCAAGCGGGGATGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCAAGCGGGGATGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //