Array 1 306477-308526 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWIV01000014.1 Chryseobacterium nematophagum strain JUb275 contig000014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 306477 47 100.0 30 ............................................... AACTAGCGATAGGAGCAATCACCGATGTGC 306554 47 100.0 30 ............................................... ATTTTAAACATACACCTAATGACTACAGAT 306631 47 100.0 30 ............................................... TGGAAAATATCCTGAGCTGTTGAGAACACT 306708 47 100.0 30 ............................................... ATGCCCAAGCCATAACAGATACTTTCGAAG 306785 47 100.0 30 ............................................... GGATATTGATTCCCGAGTGGGTGACAACTC 306862 47 100.0 30 ............................................... TATCAAAGAACGGGTTTACTGACTTGGCAG 306939 47 100.0 30 ............................................... ATATAACAGGATTCAAATATAAATCGGTTA 307016 47 100.0 30 ............................................... AGCTTCGTAGTCTTACGTCAGAATTGGTCC 307093 47 100.0 30 ............................................... TCGCGAGAAAATAGTTCCTCGTTCTTGGCT 307170 47 100.0 31 ............................................... TTTAAAAACCGAATACTTACTATTTCATGGA 307248 47 100.0 30 ............................................... ATAATAATAACACACAAATTTATAAAGTCA 307325 47 100.0 30 ............................................... ATATGCAATTCGATGATTAATATAATTCCC 307402 47 100.0 30 ............................................... ATGCTGAATGACTGTAAATTGAAGGACATT 307479 47 100.0 30 ............................................... ACTGCCGGTGTAGCTTCTTCATCCAATTCA 307556 47 100.0 30 ............................................... ACTAAGTACTATGAAGAGAAATTTAACGCT 307633 47 100.0 30 ............................................... GCGTTAGGTGCAATGATCACTATGGGCGGC 307710 47 100.0 30 ............................................... AAGATCAAGTGACCATAAAGGTCAATAACC 307787 47 100.0 30 ............................................... AATTGCTCTTTGCCTATCATTTTATCGAGG 307864 47 100.0 30 ............................................... TATATACATGCGTCATATCTAATTATTCTT 307941 47 100.0 30 ............................................... CCGCATCAAGATCAAAGGCTGCTAAAGTGG 308018 47 100.0 30 ............................................... CGAAGTCTCAAAGGTCCTTATAATCGCGCC 308095 47 100.0 30 ............................................... CAAAAAGGATACTTAAAATTAGAACATCCA 308172 47 100.0 30 ............................................... ACCCCTCCCATTAATGCTATCATTCCGTTC 308249 47 100.0 30 ............................................... ACTGTATTTACCTCGAAGACTTATTCACCG 308326 47 100.0 30 ............................................... CAGGCAGAGACTAAGAGGATCGCCGACGCT 308403 47 100.0 30 ............................................... CATTACGTACTTTAGGATGAAATGTACCAC 308480 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 27 47 100.0 30 GTTGTGAATTGCTTTCAAAATTTATTATCTTAGTGATACGTCACAAC # Left flank : TATTCTAAATAAAACCTAGTAATAACAAAAAATTAAGGACTTGTAAAATTTAGCCTTATAACTTTGGTAGGGGTATTCTGTAAAAAATAATCCTTCAAGGGAGGGTAGTTACCCATTGGAAATAAAAATTTTATATTTTGCATCTTTATGTTTTTGTGAAACAAATATATAGAATTTATTTAATAGCTCCTACATCTAAAAATAGCTTGAGAGTTTTTACATTTACTTTTATTCAATGATCCATACTAATTCTAATAATCAAATAAAGCAAAACTATATTATAGAATAAATTATTTTTTAATATTTACAAAATAACTTCAATTATTTTCTGAAAATTTTAATCTCAAAAAAAACTATATCTTGCATTCTTTTTAAAGCCTGTTTAAATTTTGTCTAATAATAATTTTAGCAGATAATTTGTTCATGTTATTGGAAGATTCATGAAGTTTATCTTAGTGACACGTCACAACATTGAAAAACCTGCACCTGTAGAACCATAA # Right flank : CCTCAAAAAATAATCTACTGGTTTACAGTAGATTATTTTATTTATTAGGATTTAAAATTTAAAATAATTCAAGCTGTTGAAATGTAGGAGGTGGCTCTTCTCTATTTCTAGCAAAAAAGATTTGAATATCTCCAAACTGTTTATCCGTAATACACATAATAGCCACTTTTCCCGCTTTTGGTAACATGAATTTCACTCTTTTAATATGAACCTCTGCATTTTCCCTGCTTGGACAATGACGAACATACATTGAAAATTGGAACAATGTAAAACCATCCTCAATTAAGCCTTTACGAAAGCGGTTTGCATCTTTCATATTCGCTTTGGTTTCAGTCGGCAAATCATACAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGTATTCATATCAATTCAGGATAAGATATCAATCGTTTTTCTCCTGTATAACATTTATAAAGCGAAGTAGCTGTTGTTTTTACTGCTACCAACAATGGTCTTGTTTTTCCAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTTATTATCTTAGTGATACGTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.90,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //