Array 1 614178-615566 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIGC01000002.1 Aliarcobacter skirrowii strain NCTC12713, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================================================================================== ================== 614178 36 91.7 33 ....................TAT............. ATAGCTTTTTCGTTATTTATTACTATCATTTAA 614247 36 91.7 33 ....................TAT............. GTATTCTCGACATTGGAATCCTCCTTGATTATA 614316 36 91.7 33 ....................TAT............. TTTCCTCCCTTTTTGAATAGGGCACATTTTTAA 614385 36 91.7 33 ....................TAT............. TTCACAACTTGACCACTTCTTCTAGCTAAATCA 614454 36 97.2 36 ......................T............. AACTTGTCCTAAACCCCTTTTGGGTATGGTTAGCCT 614526 36 97.2 33 ......................T............. TAGTATCTGCTACTCCACCTACAGGGCTTTCAC 614595 36 97.2 34 ......................T............. AATATTCTTTAAAGGCTCTACTGATAAGAACTTT 614665 36 80.6 106 ......................TTTT.CC......T TCAGTCATCACTAAAAATTACGAAATCGCCAAGGCTCATTTCTATTTTTAGGATTCAGAAGAGGGGATTGAAACTAAAGTTGCGTATCCATATTTTGTTTTTCTAA TG,C [614696,614699] 614810 36 80.6 107 ......................TTTT.CC......T TCAGTCATCACTAAAAATCACGAAATCGCCAAGGCTCATTTCTATTTTTAGGATTCAGAAGAGGGGATTGAAACCAAATTGTGCTAAAGCATTTCCTTGCCCAGTAT TG,C [614841,614844] 614956 36 80.6 105 ......................TTTT.CC......T TCAGTCATCACTAAAAATTACGAAAAGCTAAAGCTTATTCTATTTTTAGGACTCAGAAGAGGGGATTGAAACTACAACCCAAGCTCTAGGAACTGTCATATCTAA TG,C [614987,614990] 615100 36 97.2 36 ......................T............. GTAAAAGAAGTATCAGAATGAAATAATTTTTCATTT 615172 36 97.2 36 ......................T............. AATAACTCTTCTTCATCACAATCATCTTTATCATAG 615244 36 97.2 35 ......................T............. AAGATGGAAAAATTCTATCGTGTTGATTTCCTTAA 615315 36 100.0 35 .................................... TGAACATCGGCAAATATAGTGATATTAAAAGTGTT 615386 36 100.0 36 .................................... CATCTTTTCAAAGATGTCTTTGTTTGTTATTATAAG 615458 36 100.0 37 .................................... ATCTGAACCAGTCTCTAAAGCTCTTTGAAAGTCTAGG 615531 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================================================================================== ================== 17 36 93.6 48 ATTACAACATTGACCCGATTATAAGGGGATTGAAAC # Left flank : CTCAAAGGATATTTTAGATGAAGTTGCATGATTATATTATTTGTTATGATATTTCAGATAAAAAAAGATTGGTAAAAATATCAAAACTACTTGAAAAAACAGCAGCTAGAATACAATACTCTATATACTTTTATCCAAAAGTAGCAAAAGAGTGTATAGATGATTTAGTAGAAAAATTGAATAAACTAATAAATCAAGAAGAGGATGATATAAGAATTTATAAAATTGATATTAAAAATAGTATCCATCTAAAAAGTGGAATAGATTTGCAAAATCCATTTGTGATTTGATAAGAATTTAAAGGGATTTTAAATGCTTTTAAGCTACTGTTTTGTTTTGTTATTTAAAAATCTATTGTTAACTTTATATAAGATTTTTTTAAGAGTAACAAAAAACTTCTATCTAGCTATTTTTGGGCTAGAGTTTTTTAAAACTACTATCTTTTTTATATTTAAGCAAAATATAAGATATAGAAGTAGTGATTTTATGGTATGTAGAAG # Right flank : CTCTTGTATCCTTTTTTTTGGTTTTTTCTATTCTATATTACAACATTGACCCGATTATTTTTGCCTTTGGCAAATTCAGTCATCACTAAAAATTACGAAATCGTCAAGGCTCATTTCTATTTTTAGGATTCAGAAGAGGGGATTGAAACAAAAAGTCGTATAATTTCCACCATGCGTAAGAGTAATTACAACATTGACCCGATTATTTTTGCCTTTGGCAAATTCAGTCATCACTAAAAATCACGAAATCGCCAAGGCTCATTTCTATTTTTAGGATTCAGAAGAGGGGATTGAAACATAGTGTTGCATAACTTTAATCATTTCTTTTAATTACAACATTGACCCGATTATTTTTGCCTTTGGCAAATTCAGTCATCACTAAAAATTACGAAATCGCCAAGGCTCATTTCTATTTTTAGGACTCAGAAAAAGGGGATTTTGATTTACAATTTTAAAAAGTATAAAGTATTAATAATCTAAAACGACAAATTGTGTCAAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTACAACATTGACCCGATTATAAGGGGATTGAAAC # Alternate repeat : ATTACAACATTGACCCGATTATTAGGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : NA //