Array 1 3492511-3492115 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025429.1 Chromobacterium sp. ATCC 53434 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3492510 29 93.1 32 ............GA............... TCCCCCTGCACTGGAGACATTACCCATGCTGG 3492449 29 93.1 33 ............GA............... CTGCCAACGACAACGGGAGGCCGCTGCTGTGAC 3492387 29 100.0 32 ............................. GCAACGGCAAAGAGATTAGGCGTTACCGTAAC 3492326 29 100.0 32 ............................. TCGCCGATGAGGAACTTGTGGATGACGCCGTC 3492265 29 96.6 32 .........................G... GATTGGAAAGGCGTCCCGCCCAAGCCTCTCCG 3492204 29 86.2 32 C..........A.............GT.. ACCTGACGTGCAGTCCGATGGACGTGCTTCCG 3492143 29 75.9 0 ...C.......A...A.....TC...G.A | ========== ====== ====== ====== ============================= ================================= ================== 7 29 92.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : CCTGCTGGCGCAATGGCTGTACAACGTGCCGCCGCTGTTCCACCTGTCCGCCGCCAGCCTCAAGGCCCGTCTGCCGCAGCTGCAATGCGCCGACCGGGCTTTCCGTCCGCTGCACGAGCGACTGGCCACCCAGGCGCTCACCGGTTTCGTCTGGCTCAATCCCGGGCATACGCTGCAGCAGACCCGCTTCGCCGACGGCAGCCGCCTCACCGCCAACTTCGGCACGGAAGCCGCCGTCTACGGCGAGCGGACGCTGCCGCCGCAAAGCCTGCTGGCCGAGCTGGCCGGCCAGCCGCCCAGGCTGCTGCGGGTGGCAGATTGCGCCGGCAAGTGAGTCGCAGCGATAATGCCGATGTCGTTTCGTTGGCCGTGAGGTGATGGTTTTTCACGGTCAGCGGACGGTATTATGTGGCTATTCAGGTGCTTATTTTTTGATCGGAAAATTCGGTAGTTTTTAAGGGTTGTTTTTTTTCTTTAAAAATCAGCAATTTGAAATTGGT # Right flank : TTGGGACTGCAAGCGTACTACCACCCAAGTCCCGCCCGATCTGGCTCAGGCCGGCATGCCGGCGCGCGCGGCCTCCAGCCAGCGCCACAGCTCGGGCGCGGCGAAGTCGTCTATCACGGCGTCGGCGCCGGCGGCCAGCAGGGATTCGGCCGGCAGCGCCGAGCGCAGCGCGAAGGTGGGCAGTCCGGCCGCTCGGGCGGCGCGGATGCCGGATGGCGAGTCCTCGAAGGCGCAGGCGCGGTCGGCGCGGGCGCCGATGCGGGCGAGGCCGGTCAGATAGGGCAGCGGGTCGGGCTTGGCCGCCGCCAGTTCCTCGCCTATGACCAGCGCGGCCACCTGGGACGTCAGGTCCAGCCGTTCCAGCATCAGTTCGGCGTTGGCGCGCGGCGCGTTGGTGACGACGGCGATAGGGAAGCCGCGCCGCTCGGCCCAGGCGAACAGTTCGCGCGTGCCCGGCGTCGGTTCCAGCGTGGTGACGGAGGCGCGGAACAGGGCTTCCT # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : GTGTTCCCCACGGACGTGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3499922-3499771 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025429.1 Chromobacterium sp. ATCC 53434 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3499921 29 96.6 32 .......................A..... GCCCCTCGCCTCGCCATCATCGACGAGGCTCA 3499860 29 100.0 32 ............................. AGTCCGTCATGCTCGCCAGCTCACTGGCGATC 3499799 29 82.8 0 ........................GGATT | ========== ====== ====== ====== ============================= ================================ ================== 3 29 93.1 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TTGCCTACGCCGGGGGGGCCCCACAATATCATCGAGTGTGGCTTGCCGGACACGACGGCCAGGCTCAGCGGCTTGTCCGGGCCGATCAGATGCTGCTGGCCTATCACCTGATCGAGCGCCTGCGGACGCAAGGCCTCGGCCAGCGGTTTTTGCGGTTCGACGGAGAAAAGATCGGACATGGCGCGGTTCGGACGGGATAGAGCGGGAAAACAGTATACCAGTTGGCGGCAGGCATGAAAAAAGCGGCCGGGCGGCGGTTTGCGTTGGTATGCTGATGGGGTTTTATTGCCCGACGGAGCTTGGCCGGGCTCGCCCCCGCTATTCGCAAGCAATGATGTCCGCCGTTTGCCGTCTGCGGTTTTGGCTGCTGACGAAAGCCGTGATTCTAGCGAGGCGGGCGGTGTGTTGATGGGGGATTTGAGCGGCGTTTTGCGGGTAGAAAAATCGGTAGATTTTTGAGGTGGATTTTTATCTTTAAAAATCAGTGATTTGAATTTGGT # Right flank : CCGATCGGGCCTTGCCGTGTCCGGAAACAAAAAAGCGCCCCATGGGGCGCTTTTTTCGGCACAACAATCCGGAAGGCTTAGGCGCGCTTCTTGAATTCGTTGGTGCGGGTGTCGATTTCGATCTTTTCGCCGGTGTTGACGAAGGCCGGAACCTGAACTTCGAACGTGGTGCCAACCAGGCGGGCCGGCTTCAGCACTTTGCCCGAGGTATCGCCACGCACGGCCGGCTCGGTGTATTCCACTTCGCGGACGACGGTGGTCGGCAGTTCCACGGAGATGGCCTTGCCATCGTAGAAAGTGACCTGGCAGATGTCTTCCATGCCGTCGACGATGAAGTTCAGCGTGTCGCCCAGGTTGTCGGCTTCCACTTCGTACTGATTGAATTCGGTGTCCATGAACACGTACATCGGGTCGGCGAAGTAGGAGTAGGTGCAATCCTTGCGATCCAGCACCACCACGTCGAACTTGTCGTCCGCGCGGTATACGGCTTCGCTGCCGGC # Questionable array : NO Score: 3.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.60,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //