Array 1 177044-176723 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV809449.1 Micrococcus sp. HMSC067E09 Scaffold211, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 177043 36 100.0 36 .................................... ATAGACATGCCACCCTCGACGGCCTCACAGATCAAC 176971 36 100.0 34 .................................... TCGTCAACGCGCACCACGGTCACCTCCTCGTCCT 176901 36 100.0 35 .................................... GCCAGCAGCCGGACCGCAACCGTGGTGGTCTGTGT 176830 36 97.2 36 .G.................................. ATAGACATGCCACCCTCGACGGCCTCACAGATCAAC 176758 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 99.4 36 GTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGC # Left flank : ACGATGACTGTCGAGCTGCGTCTCCCCTGCTTCGTGCAGCGGACTTCGTTGAGGCCTCATGGCCGGCTACCGGGTCATCGCCTACGGCCACGGTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGCCTCATGGCCGGCTACCGGGTCATCGCCTACGGCCACGGTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGCTTCTCGGACAAGGTGACCACGTGCCGGTGCAGCGTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGCGGATGGAGACGGCCCAACGGCACAGCCACGGCGATGTCTCCGCTGCTTCGTGCAGCGGACTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTTCGTGCAGCGGACTTCGTTGAGGCTGGCACTGTTCGGCCCGTACCGCCACGGGTGTACTTG # Right flank : GACGCTCGATCCGGTCATCGAGGTGAAGGGCAAGGTCTCGGTCAAGTCCCCGGAAGTGGTGTAACGACCTTCAAGGCATGAGAGTCAGGCCAGGGTCGGCGTCACCTCCGTGCTCATCACGGTGCCCGGCTCCGGTGCCAAAGCCTCACGGCACCGGGCGAGCAGCTTCAGGCCGAGATACCGGCGGCCCTGAAGCCCATTCATCGGTCTGCTCAGCCAGCACCGCTCCTACCAGGCGGATGACCGCGTCTCGGTTCGGGAAGATCCCTACCGAGTCCGTGCGGCGCCGGATCTCCCGGTTCAGGCGCTCGGCGGGGTTGTTCGACCAGATCTGGGACCACACGTCCTTCGGGAAGCCAGTGAACGCGAGGATGTCCTCTCGTGCTGCATCGAGGTGCCCAGCCACCGCGGGCAGCCGATCGGTCACGTAGTCCAGCAGCCTGTCGAACTGGGCATGCACCGCTGGCCCGTCGGGCTGGTCGTACACGCTGTGGAGCATG # Questionable array : NO Score: 2.83 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 178313-177274 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV809449.1 Micrococcus sp. HMSC067E09 Scaffold211, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 178312 36 100.0 35 .................................... AGCACGAGCATGGGCGCCCTGGGGTACCGGCACCC 178241 36 100.0 36 .................................... CGTAGGCAACGGCGCCGGCCGGACCCCCTCCACCCG 178169 36 100.0 34 .................................... CTCGAGAGCGCCGCCCCGCTCTACGAAGGAGGTT 178099 36 100.0 38 .................................... GGCGCGCCGTACAGTGTCGATCCCGCCATCCGTGGCCG 178025 36 100.0 33 .................................... GGTGCGGGCATCCTCGTGCACGGCGACTTCAAG 177956 36 100.0 37 .................................... CAGATCAGCGCCCGCCGCGTGCTTCGCACGCTGGGCG 177883 36 100.0 35 .................................... AACGCCGCCGGCAAGGAGGGCGCACACGGGCCACA 177812 36 100.0 38 .................................... TCACAGGGTGCGTCTCCAGCGGGTGGCTCGTCCTCCCG 177738 36 100.0 36 .................................... TCGTCCACGCCTGGACCATCGCGAAGCGGGGCACCT 177666 36 100.0 37 .................................... CTCATGGCCGGCTACCGGGTCATCGCCTACGGCCACG 177593 36 100.0 33 .................................... CACAAGGCGGTGGGACGATGACTGTCGAGCTGC 177524 36 97.2 37 ......C............................. CTCATGGCCGGCTACCGGGTCATCGCCTACGGCCACG 177451 36 100.0 37 .................................... CTCATGGCCGGCTACCGGGTCATCGCCTACGGCCACG 177378 36 100.0 33 .................................... TTCTCGGACAAGGTGACCACGTGCCGGTGCAGC 177309 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 15 36 99.8 36 GTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGC # Left flank : TGCGATGAGTTCCCGGGACAGAATGAGGCGCAAGTTGATCGCGTATGACATTCCTTCGGATCGTCGACGATTGCGGGTTGCCCGTGCGCTGGAAGAGTTCGGAGATCGAGTACAGTACTCCGTCTTCGTGGTGGATCTCTTGCCGTCGCGTTTCGTGCAGTTGACGGCTACCCTGACGGACATCCTCGATACGAAGGAAGACAGCATCCTCATCTGCGACCTGGGTCTGACCGCCGCGTTGTCCGACGAACAGTTCAGCTTTCTCGGACGCTCACGCGATGTCATGGAGATGGGTCCCGTCATTATCTGAGTGCTGTACCCTCCGCGAGGGGTCCATCGGTGTAGAAAACCCGGTGAGGTATCGCATCCAGAAAATGCCTTGTCAGACGCTAGTTGTGGTCGTCCCACGGCGTGCCTGGCCGCGACTCGAGCCTGCGCAGCCGGGACCTCTCGCGAGAGGCTCCTCAGCTCCTTGTCAGAGGGCGGTAATGTTGCCCACT # Right flank : GGATGGAGACGGCCCAACGGCACAGCCACGGCGATGTCTCCGCTGCTTCGTGCAGCGGACTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTTCGTGCAGCGGACTTCGTTGAGGCTGGCACTGTTCGGCCCGTACCGCCACGGGTGTACTTGGTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGCATAGACATGCCACCCTCGACGGCCTCACAGATCAACGTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGCTCGTCAACGCGCACCACGGTCACCTCCTCGTCCTGTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGCGCCAGCAGCCGGACCGCAACCGTGGTGGTCTGTGTGGCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGCATAGACATGCCACCCTCGACG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTGCTTCGTGCAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.90,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //