Array 1 504850-506429 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPFE010000001.1 Bifidobacterium breve strain 1001285H_161024_A11 NODE_1_length_621324_cov_35.9101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 504850 33 100.0 34 ................................. TTTGAGATCGCAGCACGTTGCACACCCAATGCAT 504917 33 100.0 34 ................................. AAGGACATGGACGCCTCGTGGGAGTCGTGGCCTG 504984 33 100.0 35 ................................. GACGCGCATTCGCTGATCGGCATGTTGCAGAACAT 505052 33 100.0 33 ................................. CACCTCTACCGGTGGAGCATGAGCCAACGCAAC 505118 33 100.0 34 ................................. AAGTCCCTGGGCGAAGCCCGCCATGATGGCTTTG 505185 33 100.0 35 ................................. TCGTCACGCAGGGAGTATTCGACGGCCACCTCGCA 505253 33 100.0 35 ................................. GCCTGCCGGATGGCGTCGGCATCATCCACCGGACA 505321 33 100.0 32 ................................. CACGTCCGGTGGCTCTATCCATTCGCGCATCA 505386 33 97.0 35 ......................C.......... AGAACGAGGAAGTAGTGGCCACCGTCCTTGAAATG 505454 33 100.0 34 ................................. ACGAGCAGGCCGCCCACGTTGCCCAATGCGGAGA 505521 33 100.0 33 ................................. AAATCCCGAGACACGCCTGTGGATGCCCCCATT 505587 33 100.0 33 ................................. TCCATCGCCACGATGCCGGCCAGATCCACCACG 505653 33 100.0 36 ................................. CCTGCTGATGGTGTCGAGGATGAGGTCCGCGAGGTC 505722 33 100.0 35 ................................. ATGTACATGAACCGAACGCAGCACCTCCGGCGCCC 505790 33 100.0 35 ................................. CAACAGTTTTGGGCCACTCCGGGAAGGAACAGCCG 505858 33 100.0 35 ................................. TTTGGAGTGCCTGAGCGTGGATTTCGGTCTGGCGA 505926 33 100.0 33 ................................. GCCAACGTGGGACGCATCCCCAACTTCGACAAG 505992 33 100.0 35 ................................. CAGGCCGCACCGAACCTGCAATGCGATGCGTTGGA 506060 33 100.0 34 ................................. CGTGACGAAATCGGCCAGAACATCGCGAAGGGGT 506127 33 100.0 35 ................................. AAACCGGGACGCAACCTCACCGCATGGCAGGCCGT 506195 33 100.0 33 ................................. TACGCGTCAATGTACGGCAAAGGCGACGTGTAT 506261 33 100.0 34 ................................. GTCCACCCACTGGTCGATGGCGCCGTCCGAACCG 506328 33 97.0 36 ....A............................ CAAGCCCCCATACCCCGCGCAGCCCTCAAATCCAGC 506397 33 84.8 0 .............T...........G..CCT.. | ========== ====== ====== ====== ================================= ==================================== ================== 24 33 99.1 34 GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT # Left flank : GAAGCCAAGGCCGAGTATGGCTTGGCCAATGAGGTCATAGAGTCTGAATGGTTTAAGTAGCTTGGGCTGCCAACCTTACGAACTGTTGAGGCAGTCGAAAAAGGAGATGGCACTATTGCGTGTAGTTTGTTCCGTTGCAATTGAGGTATGCGCAAAGGGTCGAGCATCGTGGTGGGCGGTGACATTTGCCTGTTGATGGGATGGCAATGCCTGAACTGGCTGCGTCGAGGGGAGGACGGTGATGTCGCCGATATCGTGCCATGTGGCCGGTGCGACCTTAAAGTTCTCATGAATTACTCGTCCTTTCGCACTGTAGAATGACGTGGAGATGAGGGTTATTTTTGTCTCTCTGGTTGCTTGATGACTTCATAGTGGCTAGTGCGCTGGTGTTTTTGACTTTTACGGACGGTGCCCAAAACGTCAACGACGATCTGCGATACAATCAGTGTTGAAAATGGATGATTTTGCCCATATCGTGGGCGAAGATGTCCATTTTCGCG # Right flank : TGCCGGATTAATACGTTGGTTGATGTCGGTATCGTCCCATCTATCCTTGATATAAGGATTTGTGATGGGGGTAACGATACCAGCTTGGTTCCACTGGTCAACGTATGAGTATCGGATACGGTTCGGTGCGTATGTTTCGATCATTCGTTGATAGTAATCGCGTTCATTAAGAAGCAGGTCCACCAGATATCCGGGTTCGTTTGGGAAATTCTTTAGTGCGCGAGTATAAAGATTGTGGTGTTCGTCCAATACCAGAGCTGGAACGGAATCTAAGCGCAAGAGTTCTTTAAACATGACGAGTCGCCCAACTCGACCGTTACCGTCGGAGAATGGGTGCGTGGATTCGAACATCCAATGTGCTTTTGCGATTGCAAAAGGATCATCTTCCAATTGTGAGTACAAGCTGAATACCTGTTTCATGGCAAGAGGCACATCTGCGGGGAGTACCGTATGAATTCCCTCAAGTTGGCTGATGACGTTGGGCACTATTTTGTATCCGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCATCCGGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //