Array 1 1149372-1148428 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSKH01000018.1 Streptomyces sp. ICBB 8177 NODE_29_length_2665110_cov_13.777025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1149371 29 100.0 32 ............................. GCCGTTAGCGACGGGGATGGTGACATAGCCGG 1149310 29 100.0 32 ............................. CCGCAGGCCGGGGGCGTCCAGACGCGCGACTG 1149249 29 100.0 32 ............................. CAGCACTGCGGGCACTCGCCCTTCGGCGGGTT 1149188 29 100.0 32 ............................. CAGGCCTCCAGTTCCGCCTTCTCGGCGAAGGT 1149127 29 100.0 32 ............................. GTCAACACGCCCTGTGCGAACCGGGCCTTGGC 1149066 29 100.0 32 ............................. ATCCCTCTGCCTGCCGACCGAACGAGACTCCT 1149005 29 100.0 32 ............................. GCCCCATCCCGATCTGTCGATCGGGTCGGCGA 1148944 29 100.0 32 ............................. TTGCGGACCCCGTGCTGATGAAGCAGGCCTAC 1148883 29 100.0 32 ............................. ACGGCTGGTACTGCTTCACCGACTACCGGCGG 1148822 29 100.0 32 ............................. GTCTTCAACGTCTTCCATCTTGTTCTGCAAAT 1148761 29 100.0 32 ............................. GCGTCGCGGACCGCCTGGCCGTCGCTCGCGGT 1148700 29 100.0 32 ............................. CCGTACTGGGGCGAGAAGACGGTGCGAGAGGT 1148639 29 100.0 32 ............................. TCGTCCTCGGGGAGCGCGGCGAGCCGCAGCAA 1148578 29 100.0 32 ............................. TCAAAGAACCCCAGCAGGGCCGGTGCTCAGAG 1148517 29 100.0 32 ............................. GCGATGCGCTCCAACAGGGCGCCGTCGGTGCT 1148456 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 100.0 32 GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : TCCGACCACGGCCACCACGTTGCCGCAGGTCTCAACCACGCGACGGACTACAGCTGGTGACTGTCATCGTCCTAACCAACTGTCCCCCAGGACTACGGGGCTTCCTTACACGCTGGCTACTCGAAATCTCGCCGGGCGTCTTCATCGGCAACCCATCCGCCCGCATTCGGGACACTCTCTGGAACGAGGTGTGCCAGCTGTCCGGCCAAGGCCGCGCATTGCTCGCTCACACCGCCGACAACGAGCAGGGATTCACCTTCCGGACCCACGAGCACTCCTGGCACCCGATCGACCACGAAGGTCTCACCCTCATCCGGCGCCCCGGTGGAGACGCATCCGCAACGAGGCCAACGACCGAGACCAAACCACGTCCCGGCTGGAGCAAGGCGGCTAAGCGCCGACGCTTCGGCCAAACCTGAACCAAAAGGATGCTTATGTCGGAATCTGCGAAAGTGGTCCGTCTCGACGCCGTAGGCCAGTGAAGTCCCAGGTCAAGGAGA # Right flank : AACGTCTGCTGCGCGGCCTTTGCGTTCCCAGACGGAAGATGTGACCCTCATGACACGTGAACTGGACCCCGCTGCATCTGCCAGGAGGACTTCGTGGCTGAGGCCAATCCCCGGGGCACCTTCCGCAGAGTTGCGGAAGTCGTCCGTGCGACTGCCCCAGGCAAGGGTGGACTTGTTCGTGAGTCGGACATCGTCCGGGAGCGCCAGGTATCCCGAACCACTGCTCGGCGTGCTCTGAAGGTCTTGGAAGCAGATGGATTCCTCCGCCCAGAGCCAGGGGTGGGCTGGCGGGTGATGGGCGGTGAGGCATCCCCGTCGCTTTCTGAGCTGATGACAGTTCTGATCCACGACGAACATCTGGCTGTCGGCGACGCCTTTCCATCCGAGTCGACCCTGTGCGATCGGTTTCAGAAGTCGCGCCCTACCATCCGCCGTGCTCTCGCCGTCCTCGAGGCAGACGGTGTGCTGCTGTCCCTGCCGGGCAAGGGACGGACAGTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1158951-1160199 **** Predicted by CRISPRDetect 2.4 *** >NZ_NSKH01000018.1 Streptomyces sp. ICBB 8177 NODE_29_length_2665110_cov_13.777025, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1158951 29 100.0 32 ............................. CTGTCCTCTGTACGCAACGCGGTTGCTACCGC 1159012 29 100.0 32 ............................. GCAGCTAAGGCCAAGGGGACCCGGTACGAGGG 1159073 29 100.0 32 ............................. GCCGTCACCCCCCTAGACAGGCCGCCGTCGGC 1159134 29 96.6 32 ............................G ACCGGATGCGGCAGGTCGTCATCTACTGGCCG 1159195 29 100.0 32 ............................. ACGTGGCATGCATTGGTCCGAACGGATCGGGA 1159256 29 100.0 32 ............................. GTGCCGGAGTCTGCGATGACGCAGTTCAACGA 1159317 29 100.0 32 ............................. CCTTGTTCGCTGGCATCACCCCCACCAAGTTC 1159378 29 100.0 32 ............................. GACCCAGGGCTCTCCCGCGTGCGAGGCAGCCG 1159439 29 100.0 32 ............................. GACCGCACATCGTCGACGACGCGCTTGAGGCC 1159500 29 100.0 32 ............................. TAAGGCCAGTCTGATTGCTGGCCAGTGGGACA 1159561 29 100.0 32 ............................. GGGACCCATCCTCAACCGTCAATCACGAATAC 1159622 29 100.0 32 ............................. GTGCGGAAGATCTGCGGGGAGCTGGGGCAGCT 1159683 29 100.0 32 ............................. ACCCACTCCGAGTCGTGCGACGCCAGCAGCCG 1159744 29 100.0 32 ............................. TACATGTCGGGCCTACAGGACCCACCCGCATC 1159805 29 100.0 32 ............................. AGGTTCGTGAAAGCGTTGATCACGGCCGGGGT 1159866 29 100.0 32 ............................. AAGAAGGGCTGGCCGCATCACCGCATGGCCGG 1159927 29 100.0 32 ............................. CAACCGCGGCTAACGGCGTTCAGCGCGAGGAG 1159988 29 93.1 32 ...........C.........G....... CTGGGTGGGTCGGCGCTCACCAGCCAGTACCA 1160049 29 93.1 32 ................G...........G GACTTGGCGTGCGCGCCGCGCAGCCTCCCGAC 1160110 29 100.0 32 ............................. GTCCTCGACTACGGCTACTCGGTCACCGGCAG 1160171 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.0 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : CGCATCCGCCTCACCGCCCGGCAGCACCTCCACCAACCGCCGCCGCACTTGCTCAGGCAACCACCGGTCCCACAACAGCCCAGCCACCGCACCGCTGTCAGCCATATGCCGCCACAACGGCAACCAGCAGTCCGTAGCGGCATCATGCTTGGCCCAGGCAGACCGGGCTTCTTGGGACAGTCCCGCGCCGAGGAACTGCGGCGAACTCCCTCTAGATTCCTCCACGAAAGCAACAAACCGCATTCACAATTCGTTGTCAGCGACTTGACGAATTTGACACCTTGCCCTGGCCGTCCTCGAGGACGCCCGAGCTTGCCGCTTGCCGTGTGGCGTGGGGTGCCCCCGGCCCTGTCGTGAGCCACAAGCCGCCCGTGGTAGAGCTTCCGGGGTGCCGCCCCGGCAGACGGGATGCCGTCTTGTGACCAATGTCCACAATGTGTATTTCGGTGGAAGTACTTGAAATTAGCGAAAGTAGCGGCTGAAATGCCAGGTCAAAGAGT # Right flank : CAACGGACCTGCAGCACAGGGAGGCAGTCCTCAAAGGTGACGTCCTCGATCCACCCGCTTCAGGCGCGCTCTGACGGCAGTCGTTGACGGCAACGGAGGCGGACAGTGCCGGACGATGACACTCCTCTGGGCACCGGGCTGGCTCATAGGAGATGTTGATGCATTGATCACAGCGTGTGTGGGACGAACTTACAAAGCAGATGTCACAGGTTCGAATCCTGTTGTGCCCACCGGCGCCGAGGCCCCCGACCGACATGGTTGGGGGCTTTTGAGATCCTTGATCGGATATCAACGGCGGTAAGCAGTAAGGGGGTTGCCCCACAGCTCCGCCGAGGGCTCGGGCGCCCTGGCGCACCGGTACGGCAGCGAACTGGACAAGCCACCCCACAGCTCCTCGACGACTCTCGACTCTCGGCGGCCGGGAGAGAGACCAGGCGTATGCGGCTCGCCTCAGCTCCGTCCCGTCTGCCGCCTGACGTGACCGTCAAGAAAGACCGTGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //