Array 1 65984-68148 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYOY01000011.1 Photobacterium angustum strain A2-1 CFSAN065423_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 65984 29 100.0 32 ............................. GTTTGGAACATCCTCACCATCAACAGCATCTG 66045 29 100.0 32 ............................. ACTTGGTAATGAAGAAGCATGACCAAGGAAGA 66106 29 100.0 32 ............................. TTGATTTGAATTAGTTAATGCATTTTTGAAAA 66167 29 100.0 32 ............................. TGTCCTCAATAACCGCGTCAAACTCAACACCG 66228 29 100.0 32 ............................. TGTGGGCGCTTTAGATGGTAATAGTGTCGTAA 66289 29 100.0 32 ............................. CTGTTTGACTGTATGCATTGTACCGTTCCCAT 66350 29 100.0 32 ............................. GTCTGATTTATCCGCACGTGAGTATATAAAGT 66411 29 100.0 32 ............................. TTTACAATGATTTAATTAATCATAATAAAGCA 66472 29 100.0 32 ............................. AACGCGCGAACTATCTTAAAATTATGATTGAA 66533 29 100.0 32 ............................. TTCACCAAGTATATTATGAAATATGCTGAGAT 66594 29 100.0 32 ............................. ATACGATCAAAAACATTATTAATATTGCAAAG 66655 29 100.0 32 ............................. AGGATCACCCTTGATAATAAATCTAGGTTAGA 66716 29 100.0 32 ............................. TTATAAACCTGACGGTCTGTTAAATGCTGAAT 66777 29 100.0 32 ............................. AACATTCACAACAATTTTGAGTGATAGAGATA 66838 29 100.0 32 ............................. CATTTAGTGATAAAAAATAAGGTTGGCTACCA 66899 29 100.0 32 ............................. CGCATTCAGCTTTCAGGCTGCATCAGTGAAGA 66960 29 100.0 32 ............................. ATTCTGATAAACGCCACCGTTGTCATCATTAA 67021 29 100.0 32 ............................. TACAGACTATAACAGCCGAGGATATAGCGAAT 67082 29 100.0 32 ............................. GGATTGCGGAAAATTTCATATCAAAAACGCAA 67143 29 100.0 32 ............................. ATCGTGCGGGTTTTATTAGTCGATACCGTTAT 67204 29 100.0 32 ............................. TAGTGGTACTCAGTATCATTGACAAAACCGAT 67265 29 100.0 32 ............................. TATCTTTTAACGATTGGTTAGCGTTTCGGATA 67326 29 100.0 32 ............................. GGAAATCCCCATGATGAGAATATTGGACCTAA 67387 29 100.0 33 ............................. ACATCGGCACCTAACAGTTCACGCAGCTTTTGA 67449 29 100.0 32 ............................. CTACTAAATAATTCCTGGCTATCTAATTCACC 67510 29 100.0 32 ............................. ATTAAAAACATTTAACTTACGTGACACGAAAT 67571 29 100.0 32 ............................. GTTCGGGCTATTTACGCATTCGTGATATTGCC 67632 29 100.0 32 ............................. GTTAACAAGGCTAATTGTATTGGTGAGATCAT 67693 29 100.0 32 ............................. ACGGCACATTTAGTATTAATCAAACCCCTTCA 67754 29 96.6 32 .............T............... ATCTCGGTATTGTATCCACGTATCGTGACGAT 67815 29 100.0 32 ............................. GGATTTTATACACTTCTATGATTCCGATTTAT 67876 29 82.8 32 ..........T.T.T........G....C TTACCAGGAATCAGCTTGATTGAGGCTTCAGT 67937 29 79.3 32 ..........TG..TA.......G....T ATGCAAATAAAACTTCTATCCAAATCGGCTGG 67998 29 86.2 32 A.........T.T...............T CATGACTCTATAAACAGGATAAAATTCATCAT 68059 29 75.9 32 ........T.TCTT.A.......G..... CAAAAAGCGTAACAAACAAAAGCGAGGCGGAG 68120 29 72.4 0 .C......TTT.T..A...........TA | ========== ====== ====== ====== ============================= ================================= ================== 36 29 97.0 32 GTGTTCCCCGCACCCTCGGGGATAAACCG # Left flank : CACTTATCGATGAAGTACTCAGTGCGGGAGATATTACAGCTCCTGAACCTTATATAGATGCGCAACCTCCTGCTATACCAGAGCCAATTACGATTGGTGATAGTGGCCATAGGAGCAAATAGTTTATGAGTATGCTTGTTGTGGTTACTGAAGTGGTACCGCCTCGATTACGAGGACGTCTTGCAGTTTGGTTATTAGAAGTTAGGGCTGGTGTATATATAGGGAACGTTTCTCGAAAAATCAGAGAAATGATCTGGGAACATATTGAATGCCTTGCTGAAGATGGCAATGTTGTAATGGCGTGGGGAACCAATACCGAATCAGGTTTTGACTTCCAAACTTATGGCAAAAACCGTCGAGAGCCCGTTGATTTAGGCGGGTTACGTTTAGTGAAATTTTTACCTGCAGACATGATTACTGAATGAAAAAATGTTCTTTAAAAAGTTGGTAGATCTTCAATGGTAGTAATTTACCTTTAAAATCAATATATTGTATTTAGA # Right flank : AACCAAATTTACCCATTCAATATCGGGGTTTTGATTAGATGTTTTAGGTTGAAGTCTTATAATTTTTTGTGTGTAAAAAGCACTCATAAAGTGTTGAACAAAATAAGAAGATAAATGGCTTTAAAGCTCAAATTTTATGAGAGCTTATACAAATTTAACATTCATAAATAACTTAATTTTGTTCTATTTCTTTTTTAATTCAATAGCGTGTTGGTTTAAGCCTTAAGTGTATTCTTTTACGTGAAAGTTAGAATACTTATTTGCAAGGTTGTTAAGTGCCCATTGAGCTGTAGGACTATGACGAATAAATATGAAATTATTTGAGACTATTTCTCTGAAATTCCCAGAGATAAACGATGTAAATTGCAAAATTCACTTGGCTGTATGGAACGGAAAAGATAATCCACTTGATATTTTCTTAGCTGGAAATTTTGAAGAATGGCAACGCTGGCAATCTAAGCGTAACTTCGAAAGAGAGTTCATTGTTTCACTGATTCAAC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCTCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //