Array 1 68095-73370 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRP01000001.1 Rhodovulum adriaticum strain DSM 2781 scaffold0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 68095 29 100.0 32 ............................. ACTTACGTCGAGGTTACGAAGGAAGGTGGTGA 68156 29 100.0 32 ............................. GCTTGGTGCGGGCGGGTCACTAGTTCCGGCTC 68217 29 100.0 32 ............................. ACAGACAGACTCGGGGTCATCGGCCTGTTGCT 68278 29 100.0 32 ............................. GGATAGGGGCGACCGTGAACCGCCTGATAGGC 68339 29 100.0 32 ............................. GGCGATACCGGCAGCCGCTATCAGGCCGATAA 68400 29 100.0 32 ............................. TTCGGCCTGGCGATCCGGCGTGCGGAAAGCCT 68461 29 100.0 32 ............................. GTCATGCCCTTCGATGAACAGTTTGATGGCGC 68522 29 100.0 32 ............................. ATCAAGCGCCCGACGCGCATCGAGTATAGCGT 68583 29 100.0 32 ............................. AGGACGAAAACGGCCTTTTCGTCAAGGGCCGA 68644 29 100.0 32 ............................. GCTCGCCCTGATCTTTCAAGGACTCCAGACAA 68705 29 100.0 32 ............................. AGGGCAGAATGAAATCTGATGATGTAACCGAA 68766 29 100.0 32 ............................. GCTTTCCGCGCCGCGTCTTTGCCGACCTTGCG 68827 29 100.0 32 ............................. CCTTTCGAGAGCGGCAGCGTCCTGGCGGTGCG 68888 29 100.0 32 ............................. GTCAGCCGCGCCAGTATCGAAACCACGAACTA 68949 29 100.0 32 ............................. TGCACCACGAGGTGTTCGCAGATCAGCTGTCC 69010 29 100.0 32 ............................. TCGGCCACCCGCTATACTCTGGTTGCGCCGGA 69071 29 100.0 32 ............................. TCCTGCGCGATGCGGCGGAAATAGTCGAAAGC 69132 29 100.0 32 ............................. CCGTTCGGCTATGTCGGTGCCGGCGATTATGC 69193 29 100.0 32 ............................. CTTACTGCCCGTCCTGCATATGGCGCAGCGAC 69254 29 100.0 32 ............................. GCGTGGATCACCCGGTGCCGCTGACGCAAGCC 69315 29 100.0 32 ............................. TTGATCGTGTCGGGGGTGATGAGCTTCATTCC 69376 29 100.0 32 ............................. GCCTATATGTCCGTGGCGGATGTGTCCGGGCA 69437 29 100.0 32 ............................. CGCCTCTTTCACGTCGCCGATCTTGTTGCTGA 69498 29 100.0 32 ............................. GTCGCGGACGGCGCCGAGTTCACCTACGGCAG 69559 29 100.0 32 ............................. GCCATGCAGCCGTCAATGAAGGTGGTCCCCCC 69620 29 100.0 32 ............................. CTGTTTGCGATCACCCGGCAGACCATCATCAA 69681 29 100.0 32 ............................. AGAGGATCAGAGAGAGCAATCGTGCTCGTCTC 69742 29 100.0 32 ............................. GACGCTCACACGCGCATCAAGCTCGCCTGCGC 69803 29 100.0 32 ............................. AGGTTTCCGATCTCGACCCCGCCGACGCCCTG 69864 29 100.0 32 ............................. ATCCCGCGCCACCGCCCACCCAGGACGCGCCG 69925 29 100.0 32 ............................. AGAAGCAGGGCCACGTCAGGGTCGAGGATGGC 69986 29 100.0 32 ............................. GCCGATTGGCAGCATGTCCACCCGGACATAAT 70047 29 100.0 32 ............................. TTGACTGGGGCGGTGATTGGGCGTTTTACGAT 70108 29 100.0 32 ............................. CGTTTCCGCTGTCTCCGCCATTTCAACGCGGA 70169 29 100.0 32 ............................. AAATCGGCGCGAAACGACAGCCGATACATGAC 70230 29 100.0 32 ............................. ACCGCGTTCCCGCAGTTTTCCAGCTATGATGA 70291 29 100.0 32 ............................. GACGGGGGTCCCCGCTTTAGCGGGGGTGTCCG 70352 29 100.0 32 ............................. TGCGGTCTGGCCCCGGATGAATTTCATATTCA 70413 29 100.0 32 ............................. CCTTTCCGGCGGGCGGTGACCCCGCCTTTGAT 70474 29 100.0 32 ............................. TCCCGAATATCCGCGTAACAGAACATGGACGC 70535 29 100.0 32 ............................. TAGAACCAACCGATGGGCGGTTTTTTGGACAT 70596 29 100.0 32 ............................. AATAAGAGGAACCTCGGAGCCGCTTTTGTAGA 70657 29 100.0 32 ............................. ATGCCAGCGCCGCCGCCCTGGGCAATCGCGGC 70718 29 100.0 32 ............................. GTGCATTCACAATTCTGATTGCATCGAAGGCA 70779 29 100.0 32 ............................. AAAAAGAGCGTCGGCTTCTTGGGTTTGCGGAT 70840 29 100.0 33 ............................. CGTAACGGACATCGTAGTTCCGGCCAGCTCGCC 70902 29 100.0 32 ............................. GACGAAATCCTGATCGGCGTGCATCAGGCCGC 70963 29 100.0 32 ............................. ACGACATCAACGACCTGCTCCTTCTGGACGAC 71024 29 100.0 32 ............................. TATGCGGACCTCGCCAGCGTCATGGATGCCTG 71085 29 100.0 32 ............................. GAACAGGGGCTGCCGGTCCTGCCGCCGGATAG 71146 29 100.0 32 ............................. GCGTCCAGCTTACCCCGCCGTTTGTGATGTAT 71207 29 100.0 32 ............................. GCTGGCCGTTGACGCGGATCGTGTCGAGCAGG 71268 29 100.0 32 ............................. GTGACGGGAACCCCCGCAAAAACAAGCGTTTC 71329 29 100.0 32 ............................. GACATGCCTTCAACTCGATCCGTCGCAGGGGG 71390 29 96.6 32 ............................C TGCGCAAATTCGTTGAAAGCGTCGGCGGCCTC 71451 29 100.0 32 ............................. GCCGCGGTTAATGGTGCCCCCGACCGCATCAC 71512 29 100.0 32 ............................. TTGTCATCTTTGGTGACAATGACCCGAAATTC 71573 29 100.0 32 ............................. GACTACGTTGGCCGCAGCCTGTGCGAAGCTGC 71634 29 100.0 32 ............................. GCGGCTTTCAAATTGATCGGCAACCTCCGCAC 71695 29 100.0 32 ............................. CAGGTGTCCGACACGCCGTCCCAAAAGCTGCC 71756 29 100.0 32 ............................. TGCGAGGAGATGATCGCCTATGGTTATGTGAC 71817 29 100.0 32 ............................. CCGACCGGCTGGCACGGATCGACCTGGACACG 71878 29 100.0 32 ............................. TCGTCTAGGCCCGTGCTCGCCTATGGCTGCGC 71939 29 100.0 32 ............................. CCCGGACCCTGAAAATCCGTTTCAATGATGTA 72000 29 100.0 32 ............................. CTGGGTCAGATCGCAATCCGAATAAAGGATGC 72061 29 100.0 32 ............................. ACGAATCCCAGACCAGCGCATCCATGTTGAAC 72122 29 100.0 32 ............................. CGACTGGCCGCGCCGGGATGCGCGCGCCTGGC 72183 29 100.0 32 ............................. ACCCAACTCCTGAAATACATCTCGGACACCAA 72244 29 100.0 32 ............................. GGCCTGCCGTTGGCGTGGCGATCCTTGCCCTT 72305 29 100.0 32 ............................. GACCATGCACGGTGATCGTCATCGGGGAGCCG 72366 29 100.0 32 ............................. CTGATAGAGCGGGTCTGACGGCTCCAGGTTCG 72427 29 100.0 32 ............................. CTGGTTGAGGCTGGCCGCAAGCGGAATGTGCC 72488 29 100.0 32 ............................. AAATTTTCGGCGCTCGCGTATTCGCCCAGGAT 72549 29 100.0 32 ............................. ATGACCAGCTTGGCCTGAACAGCTACGGCGAA 72610 29 100.0 32 ............................. CCATAGGGCCTTGTCCTTGCCGGGGTGCGAGC 72671 29 100.0 32 ............................. GGCCGCTTGCCATCGTTCGGCCTCGGGCGTGC 72732 29 100.0 32 ............................. ATGACCAGCTTGGCCTGAACAGCTACGGCGAA 72793 29 100.0 32 ............................. CCATAGGGCCTTGTCCTTGCCGGGGTGCGAGC 72854 29 100.0 32 ............................. AGCGGATTGCCGGAGAGCAGCTTTTCGCGCAC 72915 29 100.0 32 ............................. GAATTGCAGGACGACGAGCGGATCAGTTTTGA 72976 29 100.0 32 ............................. GATATTCCGACCGTCGGCGCCCAGATGAACCA 73037 29 100.0 32 ............................. GCAATGCGTGAACTGGGCAGGAGGGGGGCGCG 73098 29 100.0 32 ............................. ACCAGGCCGTGACGATGACATCCGGCCGGGCC 73159 29 100.0 32 ............................. CCGGGCTGGCCTCTCGGGCGCACCCTGACGGG 73220 29 100.0 32 ............................. CCCTCGCCGCCATTCTGCGCGAGCGAAAGTTG 73281 29 100.0 32 ............................. GGTCTGAAGTCTACTATAGGTCGCTCGCCGGA 73342 29 96.6 0 ..............A.............. | ========== ====== ====== ====== ============================= ================================= ================== 87 29 99.9 32 CTGTTCCCCGCCCACGCGGGGATGAACCG # Left flank : TTGGGCGCATCATCCCAGCCATCGAAGAGGTCCTGTCAGCCGGCGATCTGCCGCGTCCCGATCCGTCACCCGAGGCCCTGCCCCCGGCTTTCTCCGACGCGCCGCCCTCGGGCGACCCGGGACACAGGTGATCCATGATGGTCGTGGTCGTCACGAATGTGCCGCCCAGGCTGCGCGGTCGCCTTGCCGCCTGGCTGGTCGAGATCAGGGCTGGCGTCTATGTCGGGAATTATTCCGCCCGCACCCGAGAGATGATCTGGAAACAGGTTCTGGCGGGGCTGGATACGGGTGACGCAGTTATGGTCTGGAAGGCCCCTACCGATCAAGGCTACGATTTCCTCACGGCGGGAAAGAACCGTCGGATGTCGGTGGAATTCGACGGTTTGAAGCTGGTTAGCTTCTTTCCCCAAAAGCCGCGGTAAGGGCGCTCGAACGCCCTTATTGCCGGTGCGCTCTTTGACATCGTGATTTTCTTGGTGGATCAATGGCCTGCAGGAAGA # Right flank : GAGCTTGGCCAGGGCGGCGTCAGATTGGACGCTCTGTTCACGTTTCGGCGCTTTTTCGTAATCACGCTTTCGTGATCGTCAGGCTTAGAGTCACCACTGAAGACTCGACCAAGCTTCTTCGGCATGGGCGATCGTGAAGTCATGAACGAGGAAGAGGCCGCGGATTTTCTCCGCATCTCGGCGAGCACGTTGAAAAGGCGTCGCTTGGCGGGAGAAGTGCCATTCGTGCCCGGCAAACCGCCAATCTATCTCCGGAGTAGCTTGCTCAAGCATCTACAGGGAAGGGAGGTTTGGCCCGCAGAACCGTCGCTTGAATCTGCCGTAACCTTTGAGGGTCGTTCTTCTCGCTCGACCGCAACGCCGTCTTTTCGGGAGGTAATGAGAGAAGCGCTTGATCTTTGAGGGTGCATCCAATAACCGTGATAATGCGTACTTTCACGAAAGAGGATGCGATGCGTACTCTCAGGAAAATTGGGCGTTATGCAATTTGTGAAAACCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCCACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCCTACGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 63281-61133 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRP01000015.1 Rhodovulum adriaticum strain DSM 2781 scaffold0015, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 63280 36 100.0 30 .................................... TGGAGATCGCCACGCCGCTTGGTCGGCCCG 63214 36 100.0 30 .................................... GAACATGGGTTCCTCGTTGGTGTTGCCTTC 63148 36 100.0 30 .................................... CAGTTCATCGGGGTTCACATCCACGCCCAG 63082 36 100.0 30 .................................... AGGCTCCATGTCCAGATCATCCGGGCTGAC 63016 36 100.0 30 .................................... TACCTAACCCTCACAGACGAAATCGAAAGG 62950 36 100.0 30 .................................... TATGTCCCTATCTCCCGTATGGTGACCCCC 62884 36 100.0 30 .................................... TTGCCTTCGGACGACTGAGCGAGGGCATCT 62818 36 100.0 30 .................................... CAGCCTTCGTGACCATCCAGCGCGCCGGGG 62752 36 100.0 30 .................................... TGATGGGTTGGCGATCAAAGGGGCGTCCGT 62686 36 100.0 30 .................................... ACTCCTCTGTGTGCCGCGCTAATTGGGCTT 62620 36 100.0 30 .................................... GACTGGTCATACCATGTGGTGACGTAGCCG 62554 36 100.0 30 .................................... ACGGAATTGGTAAAGGCCGTGGAGGGATCA 62488 36 100.0 30 .................................... CGGGCGGTCCATCGCTCTCTGGCGACGGTC 62422 36 100.0 30 .................................... CTCGAGCTCTTCGACATGCTCGACGCGATA 62356 36 100.0 30 .................................... ACGGTGTGATTATCCACGCCGCGCAGCTGC 62290 36 100.0 30 .................................... TGCGCAACCATCATGATGTTGTTGCTGTAG 62224 36 100.0 30 .................................... GTTGATCCGCTGATGCGGCGCGGGCTGGCA 62158 36 100.0 30 .................................... TGATCCGTTCCGCGCTGCCCGCCGTCCTCG 62092 36 100.0 30 .................................... ACCCCGGCAGCAATAGCGCCGATCTGGCTG 62026 36 100.0 30 .................................... CGGCTGGTTGGTCGGGTCGGGGCGGTAGAC 61960 36 100.0 30 .................................... CAGGTGCGCTCGAACCAATCCGACGCGGTC 61894 36 100.0 30 .................................... GCGAATTGGTCGTGGATAAGGCGCACCAGG 61828 36 100.0 30 .................................... AACTCGGTTTGATCACTGTCCGTGATGGGT 61762 36 100.0 30 .................................... TCAGGCCCACGACAACCGCTTGCGGGTTGC 61696 36 100.0 30 .................................... GCGGCGTTGGTCAGCCCGCCGCTGCGCCCA 61630 36 100.0 30 .................................... ACCTGCACGAGCACATCATGCGCTCCTGGA 61564 36 100.0 30 .................................... GTGCGCGGCCATGTGCAGCTGCCCGGCCAG 61498 36 100.0 30 .................................... GAAGTATTCATCATCTTCGATCTCGCCATT 61432 36 100.0 30 .................................... GTCTGGCGCAGCATGCGGGTCGCGAAGGTG 61366 36 100.0 30 .................................... GATAACGCACATGTCGCCTTCAGCGTTTGT 61300 36 97.2 30 ...................T................ CGACCTGCGGCATGAGGGCGTGTCGCGCCT 61234 36 100.0 30 .................................... GGTGAGGCGATTGTAGGTTTCGACAGCTTT 61168 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 33 36 99.9 30 ATCCTAGCAGAAGAAGCGGCGTGGCCAAACCCGGAC # Left flank : CGCGCGGTCCTTCCTCGATCGCAAACTGAAGCTGGATTTCCCATCCCGGCCCCTGCCGGACGAAATGGGCGAGCCCGAGCATGCCTGAACGCTACAAGCAACTTTCAGGATATCAGGTCATGTGGGTCTGGATTCTATTCGATCTCCCCGTCGGCACCAAGGCTGAACGCAAACGCGCCACGCGGTTTCGCAACGATCTCCTCGATTTGGGGTTCGAGATGGTCCAATTCTCGGTGTATCTTCGACATGCGTGGAGCCGGGAAAAGGCCGAATCCTTTGCGCGACAGGTCGGGGATTGCGTTCCAGAGGCGGGACATGTTCAGGTGCTTTTCTTCACGGACAAGCAATATGTGCAAAGCCAAGTCTTTCGCGGGCAGGCCCGACCGGCGAGACCAGATGAAAAACCGCGCCAGTTGGCTCTCTTTTGAGCACCCTGTGTTCAATTCTTGGGAGCACGACGCCAGAAAAAGCCCCGTGCAACAGAGGGTTGCACGGGGCTT # Right flank : AATCATTACGCAGTATGTTGCGAGAAACGCGCGAAAGTTGGTGATGCCCTGAGGGGCGGCATATCATGGCGGTGTTCAGACGCCGTCAATTCTCTGCCGAGAAAGGGGTATGCCACATGTTGGAGACTACCATCGCCACGCTGCCCGATCCATCGGGATTTTCGCCGGACCCGTTGACCGACCTCATCCGCGGCGGGGCGCGCAGGTTGATCGAGCAGGCGGTCGAGGCGGAACTGGCCGCGCTGCTGGCCGCGTTCACCGAGGACAGGCTTGAGGACGGCCGGGCCAGGCTGGTCCGGCACGGATACCTGCCCGAACGCGAGATCCTGACCGGCGTCGGGCCGGTGACCGTCAAGGTGCCGCGCGTTCGGGACCGCAAGCCGGGGGACGACAAGATCACCTTCACGCCCAGCATCCTGCCGCGGTATCTGCGCAAGGCGAGATCGGTCGAGGAGCTGCTGCCCTGGCTTTACCTCAAGGGGCTGTCCACGGGCGATTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCCTAGCAGAAGAAGCGGCGTGGCCAAACCCGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 26600-27502 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRP01000028.1 Rhodovulum adriaticum strain DSM 2781 scaffold0028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 26600 32 100.0 35 ................................ CCGTGGGTTGGACGCGACAGCGCGGACTGGCGCAA 26667 32 100.0 34 ................................ CCCATGACCGTGGTGCCGCCGGAAAAGAGCGAGG 26733 32 100.0 37 ................................ ATCATCGGCGGGCCGGACGCGCCCGCCGGGCCCACGC 26802 32 100.0 34 ................................ AGCTTGCCGGCGGCTCGGGCGATGAGGGCACGCT 26868 32 100.0 34 ................................ TGCCGACCGAGCGGCCCGGCCCGCATATCCATGG 26934 32 100.0 35 ................................ TCCTGGGCGCAAGCCAATCTCGCCCCGGACCTGGT 27001 32 100.0 36 ................................ AGGCCGTGGAAGGCCCCGGACGCAGGCGCGCATATC 27069 32 100.0 34 ................................ TTTGCATAATGTGCAAAGAAGTCCTGGCCGCCCC 27135 32 100.0 34 ................................ TTTGCATAATGTGCAAAGAAGTCCTGGCCGCCCC 27201 32 100.0 36 ................................ GCCCCATTGCTTGAAATGGAATGCGACGCCCGCCGA 27269 32 100.0 34 ................................ ATCCGCAGCCAGCAGCGCGGCCTCCATGTCGGGG 27335 32 100.0 34 ................................ AGGTTGGCTATGTCGAAGGGGGTCTTGCTGTTGG 27401 32 100.0 38 ................................ CCTCCCCGGCGGGGATAAGCCGGGCACCACTCGCGGAC 27471 32 96.9 0 ............................G... | ========== ====== ====== ====== ================================ ====================================== ================== 14 32 99.8 35 GTCGCCCCCCTCGCGGGGGCGTGGATCGAAAC # Left flank : GACGCCTATCCCCCATGGTTCTGGAGTTGAGATGCTGGTTCTGGTTACCTACGACGTGAACACGCTTGAGGAGGGCGGCAAGAAACGCCTGCGCCGGGTGGCAAAGGCCTGCGAGGATTTCGGCCAGCGCGTCCAGTTCTCGGTTTTCGAGATAGAGGTGGATCCGGCACAATGGGCCAGGCTGAAGGCGCGGCTCGAAGGTATTATCCACCCCCAGCATGACAGCCTGCGATATTACTACCTCGGCTCGAACTGGAAACGAAAGGTCGAACATGTCGGCGCCAAACCGGCGCTGGACCTGAATGGCCCACTGATCATCTGACCCCGCGAACCCCAAGCGTGCAGCCGATACAGGCCGGGTTCGCAGGTCCGCAGCTCTTTGACATCCTGAAGAAAACCGGAAAACGCCCCATCCGGGGGCGGCTTGTTCGGGCCGATACGGCACGTTCGCAAACCGGGTTGGATTTACTCCGCCGCCCTAGATGCTTACCTGTCAGACA # Right flank : CTTTGGGGGGGCGGCGCGGTGAGGCCGGTTTCTGCCGTCCCTCACCACGCCCCGTCTTGATCCTGACGCACCGGCTTGCGAGGCTGCCTTTAACCGCAGAGGGAGTCGCCCCATGTCCCAGCCGTCGCTTTCCGATCTGATTTCGCAGGGGCGGGGCGAGGCGCCCGCCGATCTGGTGCTGCGGGGTGGGCAGGTCTTTGACCTTGTCACCGGCGAGATGGTGCCGGGCGATGTGGCGATCTGCGGCGACACCATCGTCGGGATCGGTGCCGATTACGAGGGGCGGCGGGTGATCGACGTGACCGGCTGTACGCTGGTGCCCGGTTTCATAGACACGCATCTGCATATCGAAAGCTCGCTGGTCACCCCGTTCGAGTTCGACCGCTGCGTCTGCCCGCGCGGGATCACCACCGCGATTTGCGACCCGCACGAGATCGCCAATGTCATCGGTGTGCCGGGGATCGCGTATTTTCTGGACGCATCGGCCCGCACGGTGATGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.50,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //