Array 1 693611-694180 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ269628.1 Escherichia coli strain 136-1758 aervH-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 693611 28 100.0 32 ............................ AGCAGCTTTCCAGCGAGCGCGGTTAACTCACT 693671 28 100.0 32 ............................ AAAACGGCGGGTTTTTTACGCGTGTGGCTGCA 693731 28 100.0 32 ............................ GTTAACCGTTTCACACTTAACACTATGAACCG 693791 28 100.0 32 ............................ CTACAGCAACTGATGCAACGGTAAGCGCGATC 693851 28 100.0 32 ............................ AGCAGCGGTGGCGAACCGCGCGTTGTTGATTT 693911 28 100.0 32 ............................ AGAACTCGAAATTTATCGCGGGACTTTTCAGC 693971 28 100.0 32 ............................ AGGCTGCTGGCGCTCTCGTTGTTAACGGCAGC 694031 28 100.0 32 ............................ GTTCCACGCGGATATCTGTAATTTCCAGCAAA 694091 28 100.0 32 ............................ CTGAACGTTGAAGAGTGCGACCGTCTCTCCTT 694151 28 85.7 0 ....................A...C.CT | T,C [694171,694175] ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAATTCATCGTCGAGTTGCAGGTTCAGTTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGCGCTCGTCCGATGGCGCGTGTCATCCAGGACAACCTGAAAAAACCGCTCGCCAACGAACTGCTGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAATCTGATTGTCAGGTAGGTTGGTCAAGTCCGTGATCTCGTCAGGGGTTACGGACTTTTTATTTATGGGGGGAGGAGGTTCAGACCCTTTTTTTAATGATGATGCTAAGTTATTGATAATTAGTGCTGCGGGTAGGTAAGGATAAAAAAGGGTGGCAGCAGGAGATTGAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : TACGATAGTGTTAGACGTTTGGTCGTGCAATGACACTCTCAACTTCAAACCATTAGCGTTAGCACGCAATAACAATCGTAATAATTGCGATGGAAATCAATTTTCAGCACATAAATCAATGCTGTACTAAGCCCAATACCTTCAAATATAAAATAATCACAGGATGTGTTTATGTCTTCGAATTACCTTACGCCTTCCGATCTCAAAACCATTCTCCACTCCAAACGCGCCAATATTTATTATCTGGAAAAATGCCGGGTACAGGTGAATGGTGGGCGGGTGGAGTATGTTACCAGCGAAGGTAAAGAGTCGTACTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGCTGGGAATGGGAACTTCCGTTACCCAGGCGGCGATGCGTGAATTTGCTCATGCCGGGGTGATGGTAGGCTTTTGTGGTACGGATGGCACGCCGCTGTATTCAGCAAATGAAGTGGATGTTGATGTCTCCTGGCTCAGCCCACAAAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 703238-705187 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ269628.1 Escherichia coli strain 136-1758 aervH-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 703238 28 100.0 32 ............................ TGAAAGTTGACGCCAGCGGCGACCCGCGTCAC 703298 28 100.0 32 ............................ AAGGCAAGTGATGGCGAAATTACCCGCGCAAT 703358 28 100.0 32 ............................ AAATTGGGGACACTTTCTTCTACCTCTTTTGT 703418 28 100.0 32 ............................ TCAATGCTGCTAAACGCGCACATGAAGAGTCA 703478 28 100.0 32 ............................ GCGCACGGCGTGGCGACAGAGAGCACGCCCGC 703538 28 100.0 32 ............................ AGTTCGGCATGAGCAGCTCCTCTGTAGTCAGA 703598 28 100.0 32 ............................ AGCCAAAATAATGCGTCGCTTTCTGACATTTT 703658 28 100.0 32 ............................ TCATTCTGTACAGAAAGATCAACCATAATATT 703718 28 100.0 32 ............................ CGGGGAATGACACGCCGTTAATAGTGGAACTT 703778 28 100.0 33 ............................ TGGATTCCAAACCGCCCACCAACAAAAACAGGT 703839 28 100.0 32 ............................ GATACGATCGAATTTAGTCACTGAATACCCCC 703899 28 100.0 32 ............................ GGGTTGCGCAATGGGCTGGCCGACGAACGCGG 703959 28 100.0 32 ............................ AGGTCGTAAACCCCATTTTCAAAACCAATCAG 704019 28 100.0 32 ............................ TGTGGCGCTGATGCGTCTGGGCGTCTTTGTAC 704079 28 100.0 32 ............................ GCGCGCAGTGCCTGATAATCAATTTTGCTCAT 704139 28 100.0 32 ............................ TGTACGGCAGTCTATTAGCTATAGGAGCCTGA 704199 28 100.0 32 ............................ AGCGTTCGGTGAATATTTTCCGCCCGAGTCCA 704259 28 100.0 32 ............................ ACATTTCCGCCGTTATGAATCGGTATTCCATA 704319 28 100.0 32 ............................ ATCCTGGCAGAACAACCAGTCAGCAGATCCCC 704379 28 100.0 32 ............................ AATTCGTGCTGGCGCGGGTCGTGGCATCACGT 704439 28 100.0 32 ............................ TGACGTCGCGTGAATATGACGCCGTTGTTTTT 704499 28 100.0 32 ............................ TCGAGCGTACCAGGTTTACTGTCGTCATATAC 704559 28 100.0 32 ............................ ACAGAACAGGCGAAAGAAAGGGTACGCAGTAA 704619 28 100.0 32 ............................ GCTTGGGGAGTATTGGGAATCGCTCGGCGGGA 704679 28 100.0 32 ............................ ATGAAAAGCGCCGCCTTTATGCGCCCGATTTT 704739 28 100.0 32 ............................ AGTTCGCGGCAGACATACACGCCGGGAGTTTT 704799 28 100.0 33 ............................ GTTCGACGATTGAGTCCGCCGCTGTTGTTTGAT 704860 28 100.0 32 ............................ CGGCGGACCACTCATCATCGTATAAATCTTTC 704920 28 100.0 32 ............................ GCAAACGGAATTAGCAGCAGCATGATCAAAGA 704980 28 100.0 32 ............................ GACGAATGCCGCACACCAGGGCGTCTCGTCGT 705040 28 100.0 32 ............................ CTGGAGGCGCTCACACTCACGCGGAGTGAGAC 705100 28 100.0 32 ............................ GAATATTTTGGAAAAATAGCTATCAATCCGGG 705160 27 92.9 0 .......................-C... | T [705180] ========== ====== ====== ====== ============================ ================================= ================== 33 28 99.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCTTTTTATGCGCGCCATGCCCACCGCATACAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGCGGTGAGGCGGGGATTCGAACCCCGGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTGCCAGACCTCATAGGTGGCAACGGGGCGCTACTATAGGGAGTTGGAGTGAAACGGTCAAGAAGAATTTATATAGATTGATTTGTTTGGTTACGCAATGAACACGCTGTTCGCGGGACGGAGATTATGACCGTATGTGTTCTGGTCAATTGTTTATCAAAAGCTATGCAGAAAATATGAGATTGAAGAAATACCAAACCGACCCTTTTTCTAGGTTGTAATGTAACTCATTGATTTTCTTATTGCTATTTTGAAGTCTGGAAAAAGGGTTTGAATCTGCGATTTTGTAAGTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTCCA # Right flank : ACTCAACACTCCATCCTCTAATATTTATTCCCCATAACTCATAGACGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCATTCTTTCTCTTCGCCCATCAGGCGGTAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTATTAGGCAACGTTTCAAGAACGGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTCGGCACATTACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAGCGGTGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //