Array 1 10902-13487 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZFL01000014.1 Lactobacillus delbrueckii subsp. indicus DSM 15996 NODE_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 10902 28 100.0 33 ............................ CAGGTAGCACGACACCATAGAGAGCCGCTGGGT 10963 28 100.0 33 ............................ TGTCCATTGACCGCTTAGCTTTAAGCTCTTCGA 11024 28 100.0 33 ............................ TTTAGATCGGTCAAGGGCCGGCCAATTTTAGGG 11085 28 100.0 33 ............................ TCAAAGGAAGGGGGGAAAATAAAAATGGATGTT 11146 28 100.0 33 ............................ AAGCACGATCGACAGCACGATCGACAGCACGAT 11207 28 100.0 33 ............................ TATCAAGCAAGCTTTGCCAATTTTAAGACTGTT 11268 28 100.0 33 ............................ TAATTGTATGTATTGTCGTACTTGTCCTCTAAG 11329 28 100.0 33 ............................ CGGGTTAATTCGCCGGAAATCCTGTATGGCGAA 11390 28 100.0 33 ............................ TTTATAAGCAAGTTTATTTATTTGCTTTAAGGG 11451 28 100.0 33 ............................ TTTTAACATTTTTGTTTACCTCTTTTTATCTAA 11512 28 100.0 33 ............................ TTAGAATGCAATTCGGGCGTCCTATTCTTGCTA 11573 28 100.0 33 ............................ TTACAGTCCATTTATTGTAGATTGAATCTACAG 11634 28 100.0 33 ............................ TCAACCCTATACGATCCAAGAGGAACATTTTTT 11695 28 100.0 33 ............................ TACCATCTACATCAGTTGCATCCATGATTGTTT 11756 28 100.0 33 ............................ TCCATAAAGCCGCTAAAAAAATGTTCCTCTTGG 11817 28 100.0 33 ............................ TCCTTGCCCGTAAGTATGTATGCGCAAAGGAAG 11878 28 100.0 33 ............................ TTCGCCATACAGGATTTCATCTGAGCTTTCACA 11939 28 100.0 33 ............................ TTAATATGGTGGACAACTACAAGGATTATAACG 12000 28 100.0 33 ............................ TCACCTCTACACTCACGCCTACCACTTTGCACG 12061 28 100.0 33 ............................ CTAAGCAAGAGGCGCCAAAGTAGTTGCCGTTTT 12122 28 100.0 33 ............................ CGGTTTATGGCAGCTATGTTGCCGAAATTGGCG 12183 28 100.0 33 ............................ TTGTCCTTGGCAAAGAGGGTCTTTGGTCGCAGG 12244 28 100.0 33 ............................ CTACCTGTTTACCGTTTCTTTCATAGGTCAGTT 12305 28 100.0 33 ............................ CCATGACGGTCAAAGAGTGGCGGGAAAATTATA 12366 28 100.0 33 ............................ CCCGTCCCCGTGAGCTAAATGAATTATTACAGA 12427 28 100.0 33 ............................ CGGGATTGACCGTCGGGTTGCTCAACTTGACGG 12488 28 100.0 33 ............................ TCTTGCTGAACAGCCGGGAGATGTTGATAAAAG 12549 28 100.0 33 ............................ TCAACAGTCCGCTGGGCGTGTGAAGGAAACTTT 12610 28 100.0 33 ............................ TTGCATCCGATGCTAATGCTTGCCATCACGTCA 12671 28 100.0 33 ............................ TGAGCGCCCCGCTGCTACATAGCGAATAGTTTC 12732 28 100.0 33 ............................ TTGCATCCGATGCTAATGCTTGCCATCACGTCA 12793 28 100.0 33 ............................ TGAGCGCCCCGCTGCTACATAGCGAATAGTTTC 12854 28 100.0 33 ............................ TTATCAGTCTGTGGTCAATGAAAATAGGGAACT 12915 28 100.0 33 ............................ CTGAGAGGTTTCGTTGACGCTGCAGCTTACAAG 12976 28 100.0 33 ............................ TCCCACATCCCCGGCCTGGGGGAGCGGGCGCTA 13037 28 92.9 33 ...G................A....... CAATGGTTAAGAGTGAGAGAAAAATGACTACCG 13098 28 100.0 33 ............................ TCCAGCTCATACAAGCCAGTGGTTAGCTCAATG 13159 28 100.0 33 ............................ TACGGCAGCCAAAGAAGTTTTGAAGGAAAACGG 13220 28 100.0 33 ............................ CTCCATTCGTCGATGAAAAGGGCGGCTTCCATT 13281 28 89.3 150 ..........A.T.G............. TGGGGGGCGTAGTACACCCCACTGTTATAGATCTATTTTACTTAATCGGCTGTGATCTCATTGCTATTAGTGAGTAACATGGGGCGAAACAATATTCCTCACGTATGTGAGGAGAATTCTTTCTTTATGCTATTGTGTTTTTCGTACTGT 13459 28 78.6 0 ...........AT.T.C....A.....A | T [13465] ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 41 28 99.0 36 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGACTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGAGGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : ATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAAAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAATATAGCGCAAAACACGGGCAAAAGCTATATGAGCATCTGGAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGCCTGCCGCTGATGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATACCACTTGATCATGGAAGTAGTCACTCCCTTTGAAGACGTCCACGGCAATAAGCCTGGCACC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.25, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //