Array 1 3009858-3014099 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029495.1 Chromobacterium phragmitis strain IIBBL 112-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 3009858 29 100.0 32 ............................. ATCCACCCACAAATGACGCACGCAGGCGCTCA 3009919 29 100.0 32 ............................. TAGGCTTTGCTGGATGAATTGCTGTGCCGCCA 3009980 29 100.0 32 ............................. TGCTGGACCGTGGGGTCAACCGGCTGCGGCTG 3010041 29 100.0 32 ............................. CTCCTCGGCGACCTGCAAAAGCACGCGGCCCT 3010102 29 100.0 32 ............................. CATACTGCGCCGGCGAGAACACGCCATCATTC 3010163 29 100.0 32 ............................. TTCGAACGATTGTCATACCTGCGTGATGCATA 3010224 29 100.0 32 ............................. TCCACGTTTACGAGGGCCGCAGATACCGCGGC 3010285 29 100.0 32 ............................. AATTACCCCGACTCAGGGACTGCTGGGCGGGG 3010346 29 100.0 32 ............................. GACAACTACATCACGCCCACCGCCATTCGCCC 3010407 29 100.0 32 ............................. CCGGTTCGACTCCGGTCCGCTTCAGTGTGAGC 3010468 29 100.0 32 ............................. CCGCGGAGATCCGCGCGCTGGACAAGCGGCTG 3010529 29 100.0 32 ............................. TCGTACAGCGTGGTTTTGTGGTGATGGATGCC 3010590 29 100.0 32 ............................. TCGTCCGTTTGGCGGAACCGCCAGTAGATGTT 3010651 29 100.0 34 ............................. TGGATGGGCATTGACGAAATCCACCTGACGAAAC 3010714 29 100.0 32 ............................. CGTTACGATGCCTGCACGTTTTCGAATGTGAA 3010775 29 100.0 32 ............................. CCACCCCTTATATCAATTCGTTATAACACCGA 3010836 29 100.0 33 ............................. GGTGTACGTGCTTAAAAAATAGGCAGTGTCCGA 3010898 29 100.0 32 ............................. CCGGCAGCTTCGCCAACAGCATCACCAGTCTC 3010959 29 100.0 32 ............................. ATTTCGTATGACGACAAGTTGGACCCCAGGAT 3011020 29 100.0 32 ............................. GCAACCGCATGCAGCTTACCGCGCCAGGCGAA 3011081 29 100.0 32 ............................. CTTGCTTCATCTGGTGGGCGGCCCGGCCCAGC 3011142 29 96.6 32 ............................T GGTGGGCGCCGGCACCGGCCTGGATCTGGATT 3011203 29 100.0 32 ............................. CATACGGAACAGCAATCGAGATAAATAACAAA 3011264 29 100.0 32 ............................. TCCCTCGCGGTCAGATTCAGCAACGCGGGATT 3011325 29 96.6 32 ............................A CCATTTTTGAGAATAAAACTCATGAGAATTCC 3011386 29 100.0 32 ............................. GCCATTGAAACGTATACGTTTTACGGGCGTAC 3011447 29 100.0 32 ............................. GCATTGAACACGGCAACACAGGCGGCGTTGCT 3011508 29 96.6 33 ............................T ATCGCCCGCCTGCTGTTGCTCGCCGCGCTCGCC 3011570 29 100.0 32 ............................. CTATGATCCTTTTGAACTTGATAGGTTTCTTT 3011631 29 100.0 32 ............................. AATTTCTGAGTCAGGAATCCGCAGAACCGGAA 3011692 29 100.0 32 ............................. CCAAAATTTGCATCGTGTGGGTTCAGTTCCGT 3011753 29 100.0 31 ............................. TTGGCGCTGCTGGCCGCGTGCTGGTGGCTGC 3011813 29 100.0 32 ............................. GCCGCTGACGGGATTGGACCACCTGCGCCAAT 3011874 29 100.0 32 ............................. TGAATCCGTGTCGCTTGAGCTCGTCACTTTCC 3011935 29 100.0 32 ............................. GTTGCCCATTTCGATCAGCTCTGCGGCTGTCG 3011996 29 100.0 33 ............................. CACTGATTCGGGCCAAGGGATTGCTTTTGCGGG 3012058 29 100.0 32 ............................. GGAATCAGCGATGAGGGTGAGATAGTCGAGTT 3012119 29 100.0 32 ............................. TTCCTCGACCCGCGGTTGGCCGACTCCCGCAA 3012180 29 100.0 32 ............................. ATCCGCTTTCGGCGCCAGGTCATCCGCAGTTA 3012241 29 100.0 32 ............................. TTTTCCATGCCGGCCAGTTTGCACAGACCGGC 3012302 29 100.0 32 ............................. GTGGAGCCGGCGTTATTCGAGGGCGCAAAAGA 3012363 29 96.6 32 ............................C AGCCACGACTGCATCAATTTCCAGTTCCCGAC 3012424 29 100.0 32 ............................. GTGAAACTAGCGGAGCCAGATAACCATCATCG 3012485 29 100.0 32 ............................. CCGGCCGGGGTCAGAGCAAGGGCAGCGCCAGC 3012546 29 100.0 32 ............................. TCGATAATGCTGTACGGATCATCTTCCGTCAG 3012607 29 100.0 32 ............................. GAACTTATTTCTTTTTTGCCAAAACTTTATTT 3012668 29 100.0 32 ............................. TCCCCTGTGTTGCCTGCTTTGCAGCCGCCTCC 3012729 29 100.0 32 ............................. CCGCCGCCAGCCGCGAGCTGGCCGGCCAGCTG 3012790 29 100.0 32 ............................. GTTCCGGCTGGTTGCACGGTTCCCAACTGTGA 3012851 29 100.0 32 ............................. CCATCCTTTTGCTTGCCCAGCAGGGCATCCAT 3012912 29 100.0 32 ............................. CAGCGCGTTCTGCGCCGGCTTCTGACCAACCC 3012973 29 100.0 32 ............................. CCATCACCGGCGACGACAACGTGACGCTGGAG 3013034 29 100.0 32 ............................. CCCGCTCAGGCGGGCTTGTAGATCGTGAACAG 3013095 29 100.0 32 ............................. GCGGCGGCCATGGCGCGAGTGGACGCCATCAA 3013156 29 100.0 32 ............................. AAATGAGTGAAGAAATGGACGAGCTGCGAGAA 3013217 29 96.6 32 ............................A GATGCCGACGACGCCGACACGATAGAAACGCC 3013278 29 100.0 32 ............................. GTAGTGCATCTGTGGGCCGCGCCGGAATGCGT 3013339 29 100.0 32 ............................. CTGGAGGAGGCAGCCGGACGCATCCTGGTGGG 3013400 29 100.0 32 ............................. GGCGACCGCTTTCCCGGTGCCGATGCATTGGA 3013461 29 100.0 32 ............................. TTTCTATGACGACTGGCGGCTTTTGGGCATGG 3013522 29 100.0 32 ............................. GGCATCCCAATGATTACACTGGCCGTTGATTC 3013583 29 100.0 32 ............................. GGGATTCATGCGCGCGAGGCAGGGTGTTTTCG 3013644 29 100.0 32 ............................. ACCTTTCTTGGTAAGGCGGAGATGCGGCGCGC 3013705 29 100.0 32 ............................. GGGTTTAAATCATGATTTCATTAATCACTGCT 3013766 29 100.0 32 ............................. ACCCGCGACAGGCATATGGGGAATTGGCAGAC 3013827 29 100.0 32 ............................. CGAGGCCGCCGCGCCACAGGTAATGCGATGAC 3013888 29 100.0 32 ............................. GTCGATCTCGTCGACTGCATGAAGCTGCCACC 3013949 29 96.6 32 .........G................... CTGTCCAGCGGTTCTAGTGGCTCGTCTGGATC 3014010 29 100.0 32 ............................. CAGCTTTCTTGCCTCAGCCAAGCCAACGGATG 3014071 29 72.4 0 ............T.........CTCTTTT | ========== ====== ====== ====== ============================= ================================== ================== 70 29 99.3 32 GTGTTCCCCACGCACGTGGGGATGAACCG # Left flank : GCCAGCGTGGTCTTGCCCACGCCGGGCGGGCCCCACAATATCATCGAGTGCGGCTTGCCGGACGCCACCGCCAGGCTCAGCGGCTTGCCCGGGCCGATCAGATGCTGCTGGCCGATCACTTGTTCTAGCGACTGCGGTCGCAGTGCTTCGGCCAGCGGTTTTTGCGGCTCGACGGAAAAAAGATCGGACATGGCGCGATTTGGGCGGGATGGAGCAAAGAAGCAGTATACCAGTTGGAGGCAAGCATGAAAAAAGCGCCAGCCATGCGCTTTTTTCTTGCATGTCCATGGAATAAAGGTAGGCTGTGGCATCTGGCCCTGTTGAGACAGCCCGGCGCTCAGGCACCGGGGCGAGCGGCATCTGACCCTTGTGCAAAGGACGATTTTCCAAGGCCAGGGGCTGGCTTGCCGTGCTGATTGGAACGGCGTTTTATGGCTGGAAAAATCGGTAGAATTTCAGGGTGGTTTTTTATCTTTAAAAATCAGAAGCTTGAAAATGGT # Right flank : TCCAATGGACTGAGCGGGTATTTTGACGAGCGATCAGGACTGCCATCCATCAGTTCTTGCTAGCCATGCATCGCCGCATCCGTAAAACAAAAAAGCGCCCCGCGGGGCGCTTTTTTTCGGCACAACGATGGAAGGCTTAGGCGCGCTTCTTGAATTCGTTGGTGCGGGTGTCGATTTCGATCTTTTCGCCGGTGTTGACGAAGGCCGGAACCTGAACTTCGAAGGTGGTGCCCACCAGGCGGGCCGGCTTCAGCACTTTGCCCGAGGTGTCGCCGCGCACGGCCGGTTCGGTGTATTCCACTTCGCGGATCACGGTGGTCGGCAGTTCCACGGAGATGGCCTTGCCGTCGTAGAAGGTAACCTGGCACACGTCTTCCATGCCGTCGACGATGTAGTTCAGGGTGTCGCCCAGGTTGTCGGCTTCCACTTCGTACTGGTTGAACTCGGCGTCCATGAACACGTACATCGGGTCGGCGAAGTAGGAGTAGGTGCAGTCCTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3021403-3023455 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029495.1 Chromobacterium phragmitis strain IIBBL 112-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 3021403 29 100.0 32 ............................. GGTGCATTGGCCTCTGGAGCCGCCCAGATCTC 3021464 29 100.0 32 ............................. AGCTCATCGCTCAGGGTTTCATCCGCGAAAAC 3021525 29 100.0 32 ............................. CTCAAACTTGAACGGGATGTTTACCATACCGG 3021586 29 100.0 32 ............................. TTCATGTTGGATAACTAACTCACTTCGTTAGC 3021647 29 100.0 32 ............................. TGCGAGCGGTTTTTCACGCGGGAACAGGATGG 3021708 29 100.0 32 ............................. ACCGCGTCCTGGCAACGAATGCCATGCTGCTG 3021769 29 100.0 33 ............................. TAGATGATGATGCGTGGCGAGCTTGGAAAGATC 3021831 29 100.0 32 ............................. CCAGGTCAACGCGCGCCCGTTGGTTTGCGCGT 3021892 29 100.0 32 ............................. TGCCGAATTTAGATCTGTTTTTGAAACAAAAC 3021953 29 100.0 32 ............................. CCAAGCTCTACGGTCTTGACCGAACGAAACAA 3022014 29 100.0 32 ............................. TTGTCCAGGCTGTGGCTCTCTGCCGACAAGTC 3022075 29 100.0 32 ............................. GGCGGTGTGTCGCACTGCTCCAACGGCAAGTT 3022136 29 100.0 32 ............................. CTATCATCAGTCCTTTTAAGCGATAGCGTGAA 3022197 29 96.6 33 ............................A GCAGGAACCAAGCCCCCTTCTTACCTAGCTGAT 3022259 29 100.0 32 ............................. CAATGCAAGAGCAGAACGGCGAGGCAATGAAC 3022320 29 100.0 33 ............................. TGCGGCATCAACGGTCTCACGCTGATATGTCGC 3022382 29 100.0 32 ............................. AGCTGACATGCCGATCCCCTTCCCCTTCGACT 3022443 29 100.0 32 ............................. TTGATCGAATGGGCTGGCCGCTCGCCTATGGC 3022504 29 100.0 32 ............................. CTATCTCCTTGAAAAGGTCGTTCTGGTGCAGC 3022565 29 100.0 32 ............................. GCCGTGGCCAGGTGGCGGTGGTTCTCCTTCAA 3022626 29 100.0 32 ............................. ACGATTTCGACGGCCTCGCGCTCCTCGTCGGT 3022687 29 100.0 32 ............................. TGACCATCCACCAGGCCGCCGAGGCTAACACC 3022748 29 100.0 31 ............................. TAGCCCTTCGCATCCAGGCGAGCGGCAGCGC 3022808 29 96.6 32 ............................A GCAAAACGCGCAGCGATACGCCGCGCTTTGCC 3022869 29 100.0 32 ............................. GGCGCTAGCAGGTCGCGGGCGATGCGCGCCAT 3022930 29 100.0 32 ............................. CTGGGTCTGGTGGAGAATCTGATCATGCGGGT 3022991 29 96.6 32 ............................T TCATTCTGATTAAACGACGCGACGGCGGAAAC 3023052 29 100.0 41 ............................. AACCAGCGGCAGCGGCTGACCGCCTGGCGTCGGCGTCAGAT 3023122 29 100.0 32 ............................. AGAGTCGAGGAGCTCTTCTGCTCGCGCCGCAG 3023183 29 100.0 32 ............................. TAATTTATGATGGGCAGCATATTATGTATGAA 3023244 29 100.0 32 ............................. TCAATTGCATCTGCCAGTTCCACATATTTGAT 3023305 29 100.0 32 ............................. CTGGCGTGACGCGCGGGACCATCTCCACCCTC 3023366 29 100.0 32 ............................. GCCGTCTTATTGATATGGACCTATTGCAGGCC 3023427 29 93.1 0 ............T..............G. | ========== ====== ====== ====== ============================= ========================================= ================== 34 29 99.5 32 GTGTTCCCCACGCCCGTGGGGATGAACCG # Left flank : AATCTGCTGGCGCAGTGGCTGTACAACGTGCCGCCCTTGTTCCACCTGTCCGCCGCCAGCCTCAAGGCCAGGTTGCCGCAGCTGCAATGCGCGGACCGCGCCTTTCGGCCGGCGCATGAAAAGCTGGCCCCCCAGCCGCTGACCGGCTTCGCCTGGCTGAACGCCGAGCATACGCTGCAGCAAACCCGTTTCGCCGACGGCAGCCGGATCACCGCCAACTTCGGCGTGGCCCCCGCCGCCTACGGCGAGCGAACCCTGCCGCCGCAAAGCGCTTGGTTGGAGCTGGCCGGCCAGCCGGGACGCTTGCTGAAAGCGGGAGATTGCGCCGGGGCTTGAGTCGCGAGGATAATGCCAATGTTGTTTTCGGCCGCGAAGGGGCATCCCATCCGGCCGGAACGGCATCCTGGCGCTGGGATTCGGGCGGCGGATTTGGCGGGGTGAAATTCGGTAGATTTTTGAGGTGGATTTTTATCTTTAAAAATCAGTAGTTTGAAATTGGT # Right flank : GTGTCATTAGAAAGCAAGTAAATGGCAAAACGGAGTTCTCTTCGCTAATAGAGACAGCTACTTGGTAGTTGCTGTGTGGATACTTTTAGCGTGAAATGACATTGGGGTTTTTGGCTGCTAATCTGCGCACCTGGGTAGAGTCCAGCGTGCTGACCGATTTCTGCCGGAGGAGCGATGCAGTCAGACTTAAGCGAATTGTTTCCGCCTAATGGGGCGATTGTGATTAGGAGCTTAACTTTTAATACATTGCCGCTTGTTGTCCGACAGCTCTGGGCCAAAAGCGGTGATGCTCAGGGCCATGGTCTGCTATGCCACATGCTGGATGTGGCGGCGGTGACCGGAGCCTTGCTCGACTACTGCGGGATTTCGGCAAAGGAGCTGGCGCGGCGTTTCGGCCTGCCCGAGCATGCGGCGTTTCCATGGCTGGCCGCCTTGGCGGGCTTGCATGATTTGGGCAAAGCCACGCCTGGCTTTCAGGCGAAATGGGATGACGGACGTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3032158-3034569 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029495.1 Chromobacterium phragmitis strain IIBBL 112-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3032158 29 100.0 32 ............................. ACCGAAATGACGTTACAAAATTTATTGGAATC 3032219 29 100.0 32 ............................. GCGTACCGCTCCAGCATCGATGGCGCGCTGGT 3032280 29 100.0 32 ............................. TCTCCAACCTGTGGTTTTTACGTACTCACGCC 3032341 29 100.0 32 ............................. TCTGTCGCCGCCGACACCGTTACCACCAGTAG 3032402 29 100.0 32 ............................. TTCAACGACCTGACCGCAACAGCGGCGGACAG 3032463 29 100.0 32 ............................. ACGCTGACCAACAACATCTCGCTGGACCTGTA 3032524 29 100.0 32 ............................. GGGGCAGCACCCTGATTTCGGCGCCGGCGAAT 3032585 29 100.0 32 ............................. CCTCGACGAAATATTGGGAGGCACGGCCGCCA 3032646 29 100.0 32 ............................. GCGTTGTGCGATGAGCTGGACGTGATGAAGGC 3032707 29 100.0 32 ............................. TAGGACACACCGCGCTGCAGCGCCTCGCCGAA 3032768 29 100.0 32 ............................. GCCTGTGCCATCGGTGCGCTTACGATCCACGC 3032829 29 100.0 32 ............................. CGTGAATCCATCAATCCATGCGTCCAGCTCGC 3032890 29 100.0 32 ............................. CACTACGGTGACCGTGAACGACGTGTATGGCA 3032951 29 100.0 32 ............................. TACCCAGCGTTCCATCCCAGCTATTTGCGCCG 3033012 29 100.0 32 ............................. CTGGGCTACGACGTGGAATACCGGACGCTGGT 3033073 29 100.0 32 ............................. GACCACGCAACCGGCGACGGCGGCACCACCAT 3033134 29 100.0 32 ............................. CCCTGGATCTGAGCGCAACCCCGCTATGGGCT 3033195 29 100.0 32 ............................. GCGCTGGGGGTTTCGCTGACGTGGCTGGAGAC 3033256 29 100.0 32 ............................. GCCTACCGCTCCAGCATCGACGGTGCGCTGGT 3033317 29 100.0 32 ............................. AGCAACGCTGGGCGCCGCGACGCGGCGTACGA 3033378 29 96.6 33 ............................A GGGACGCAGGAAGAGCTGGCCCTGATTTGCGAC 3033440 29 96.6 33 ............................A GCTGACCGCTAATAGTCACCTGGATCATCAAAT 3033502 29 100.0 32 ............................. CTGGAATCCGAACGCAGCAGCTCCGGCAGCGG 3033563 29 96.6 32 ............................A TGGATGGACTCAGTCATCGATCTCATGGGCCA 3033624 29 100.0 32 ............................. GCCAATGTCAAGCAACGGAGCGAGGCTGGTAA 3033685 29 100.0 32 ............................. TACTGGCTGTACAGGCTGCCGGGTGATGCCGC 3033746 29 100.0 32 ............................. GTGAGTTCAGCGGCTACGCAAATCACCATTTG 3033807 29 100.0 32 ............................. AGCTCGCGACAACTCCAGAGTGTACCTGGAGG 3033868 29 100.0 32 ............................. GAAATTGTCACCGTCCATGTTGCTGATAGAGC 3033929 29 100.0 32 ............................. GGGCGCTGGGCATGGCGACACATTCATTAAGC 3033990 29 100.0 33 ............................. CGTCTACATGCTCTTATGCCTCTGTTCGAGCAA 3034052 29 100.0 32 ............................. GATCGGCTCGGGAGACCGCGAAGCGGCGGCCG 3034113 29 100.0 32 ............................. CCACATCACGCAGAAAATCGTACAGACGCTGT 3034174 29 100.0 32 ............................. TCGTTCAATCAGATCCGTCTGGGATTTTGCCA 3034235 29 100.0 33 ............................. TACAACGGAAAGCCTGATGTCTGCCATGTGTGC 3034297 29 100.0 32 ............................. CTCGGCATTACCCTTGCGACCCGCCACCGTCA 3034358 29 100.0 32 ............................. CCGTTTCAACGACCACGCCCTTTCTCGCCACC 3034419 29 100.0 32 ............................. TCAGTCTCAACGACAGCAACGGCAACGCGATT 3034480 29 100.0 32 ............................. GTCGCCCAGGTACTGGGAATCGACCCGATGGA 3034541 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.7 32 GTGTTCCCCGCATACGCGGGGATGAACCG # Left flank : CGGACATCGAAACCATGCTGGATGCCGGCGGTCTGGACAGGCCAGAGGCCCAAGGGGTGGTGGACGCGGCGTTTCCGGAAGACGAGGGGTTGGGCGATGTTGGTCATCGTGCTTGAAAACGCGCCGCCCCGGCTGCGCGGCCGGATGGCGATCTGGCTCCTGGAAATCCGCGCCGGCGTTTACGTGGGGGCCTACAACCGCAAAATCCGCGACTACCTGTGGCAACAGGTGGAAGAAGGATTGGAAGACGGCAACGCGGTGATGGCCTGGCAGGCTGCTGCCGAGGCCGGCTTCGACTTCGTCACCCTTGGGGCCAACCGCCGCGTGCCGGCGGAGTTCGATGGCGCGAAATTGGTGTCTTTCCTGCCGCCTGCCGTGTCGGAAGAGGCGGGCGAATAGGGGCTGGACGAGGCTGTTTGGAAGAGAGGTTTGGCTCTTTAAAAATCGGTAGATTTTTGAGTGGTATTTTTTCTTTGCAAAATCATTGACTTGTAATTGGA # Right flank : GCCGCCGGATACGAGATTATCCTCACGGTGCAGTTGCTGTGGTTCCTGTTTGTTTGACTCATCGGTCTTGGGACGGTTTGCCTGCGCGACCGTTTTCGCCAGCCAGATGCTCCACCAGCCTCAGCGTCAGGCTTTCCCGCGCCGCATTGGCGGGCCAAACGGCGTAGACGCCTAGCGCCTCCACTTGCCATTCCGGCAGGACGGTTGCCAGCCGCCCGGCGGCGATATCCTCCTGCACCAGGAAAGCTGGCGGCGTGGCCAGGCCGCAGCCGGCGATGGCGAGCCGGCAGGCGGCATCTATGCTGTTGACTGTCAGGCGCGGTTGGAAGGCGAAGGTTTGCGCTTCATCGGGGTCCAGGCTCAGCGTTTTGCGATTGGGCCGCATGCGCATGCCCAGCCAAGGCCAGTTGGCCAGTTCCATCGGGACGCGTGGCGCTTCGCGTTCCGCCAGCAGCGAGGGCGCGGCTACGGTGAGGCGCGGCATATCGAACAGGCGGCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //