Array 1 158-7 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMP010001653.1 Streptomyces parvus strain SID7590 contig-13000032, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 157 29 96.6 32 ............................G ACCCCGCCGGGCGGGGTGAAGCGCTACGACCA 96 29 100.0 32 ............................. GGGCGCAGCGACCGGCCGTGCATCGCGGCGTC 35 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GCGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : CTTCCGCACCTTCTGGTCCCGCACCGCCCGCGACAACGAGTGGTGGAACACCTACCTCGCCACCGAAACCGCCACCCGGGCCACAGCCCCCACCGCCGCACCCGAAGCACCCGCCTCACCAGACCTCGCAGCACCTGCGGAACCCCCGGCCCCCAGGCCCACCCGAAGCCCTCCCCGACGGACTCTGCCGCCCCTGCCACCAAACCCACACCACCACCGGCGACACCACCCCCGACCCCGCCCAGATCGCCACCGTCAAAGCCCACATGGCCAACCTCCGCACCCTCCTCAAACCCGTCTGAGCCCCAACCAAAGCTGCCCCGACCGGACGAGGACCACGCCCTTCTTCCGAGGAACCCGCGCCGCATTGGCAGCAGAGGGCAGAATCACCACTGACAAGCCCCAACCACAACCGGCACAACGAGAGGGGCGATATGCCCGCTTCTCAAGAAGTGAATGAAAACCGCTCTCTGACCCCGTAAAGCCGCAGGTCACGAAGT # Right flank : CGCGGTC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5903-4168 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMP010001186.1 Streptomyces parvus strain SID7590 contig-24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5902 28 100.0 33 ............................ CGTGATCGGCTTCCAGGGACCGGGCGACATCGG 5841 28 100.0 33 ............................ GGTGAAGCGCACCCGGCGCGTCCCCTTTGAGTG 5780 28 100.0 33 ............................ GCGCGACTTCGACAAGACGCTCCAGGGCCAGAT 5719 28 100.0 33 ............................ GAGGGTCTTCGGGTACACCCCCGACCTGTCGAC 5658 28 100.0 33 ............................ GCGGTCCGAGTCCTGCGGGGCGATGTCGATCAC 5597 28 100.0 34 ............................ GACTCATCAGCGCCTGACTCGGGAGCTGTCCGAG 5535 28 100.0 33 ............................ GCTCGTCGAGAACCTCCGCGGTGACGTCGCGGC 5474 28 100.0 33 ............................ GCGGTTCTCGCTGTGCCGCTGGATGGAGATGGG 5413 28 100.0 33 ............................ GGCCCACCATGGGGACCAGGTGGCGAACTCCTT 5352 28 100.0 33 ............................ CTCGCCACGTAGTCAGCCTCGTTGGTCGTGAGC 5291 28 100.0 33 ............................ GGACATTGGCGGCCGGTGGGACGGCGCATCCCG 5230 28 100.0 33 ............................ GTCCACGCGAACGGTGCGGTCGGTGATCGCAGG 5169 28 100.0 33 ............................ GTTCTTCAGGTCGAGGCGGGCGGCCTCCTCGAT 5108 28 100.0 33 ............................ CTCCTCGTACGCCTCGCGTACGGACTCACCGGG 5047 28 100.0 33 ............................ CCAGACGCGCGGCCGGCTCGACGGCGTCCGCGA 4986 28 100.0 33 ............................ GGCGGACGTGTACGCGGCCACGCGCGCGAGCCG 4925 28 100.0 33 ............................ GACCACACGCCCCCACTAGTGATCGTGATACGT 4864 28 100.0 33 ............................ CTGAGACCTGACACCGTGGCCGCGATCCTCGTA 4803 28 100.0 33 ............................ GGCACCCCAGAGCCGCGGGGTCAGGGGGATGCT 4742 28 100.0 33 ............................ GACGGGTGCACCGACGGTGACCGGGATGTCGTC 4681 28 100.0 33 ............................ GACGACCGCGCTGATGCTCGCCGCCCTGGACGC 4620 28 100.0 33 ............................ AGCTCCGGGGCGGGTGCGGGCTGGCTGGTCGGG 4559 28 100.0 33 ............................ GGCCATGAGCCGTCTGCCCGACCAACAGCTCGA 4498 28 100.0 33 ............................ GTACCTCCGCGTCGAGGCCCCCGCCGAGGTTCC 4437 28 96.4 33 .....................G...... GAGACGGGATACGTGAGCGCACCCACGGTGAGA 4376 28 92.9 33 .....G........C............. GGCCAGGTGAACGTGGGCGTCGATGAGCCCTGG 4315 26 92.9 33 ...........--............... GAGGATCGGGATCACGGCGTGCATTCCTACGCC 4256 27 78.6 34 ........G....TC..C.....A.-.. GGGCAAACGACGTCGTCGTGCCCTGCCAGACGAT 4195 28 92.9 0 ..C...........C............. | ========== ====== ====== ====== ============================ ================================== ================== 29 28 98.4 33 GTGGACCCCGCGCCTGCGGGGATGGTCC # Left flank : CCCGAGGGAACGGACTTCGACGACCCCGAAGCCAACAGCCTGTGGGACGAGAGTGTTGGCGCTGTTCCGGGAGGCACCAACTACGCGAGCCACGCGGACCTGTCGACACATGGAATGACCGACAACCACATCGCGGTCATCGGACCCGAACCTCACGAAACCGAACCCACGTCGTGACCGTCATCATTCTCATCGCCGCCCCGGAAGGGCTCCGTGGTCACCTAACCCGATGGATGGTCGAGGCGAGCGCCGGAGTGTTCGTCGGCAACCCCAGCCGCCGGATCCGCGACCGCCTCTGGGAACTCCTGGCCACCCGAATCGGCGACGGCCAGGTCATCCTCATCGAACCCGCCGCCAACGAACAGGGATGGGCCGTCCGCACCGCAGGCCGAGACCGCTGGCAACCTGTCGACTTCGACGGCCTGATTCTCTCGGCCCGCCCGAAGAACCCACCAAACGAAAACAGCCACCCTGCTCGGTAAACGACCAGCTCAGGAAGT # Right flank : GTGCGCCGGAAGGCTCCGCGAGTACGTCCGGAGTGATTCCGCACCGCGGGAACTGCCCCGCCTTCACCCGTGCGCGACTGCGGACGATGCGAGCCCCGGCGTATCCACCGGAGGTCCTGTGCAGCTGATGCATGGGGCGGTGGAGATGCTCGCGAGGGGGAGAGGGAGACCCCCGCCGGGAGGTGCGCAGTACCCGCCCAGCGGCGCCGGGTCGGCACGCGAGCGCTTCCTCCGGAGTTCGCTCGCCTCGACGGTCGCGGGGTGGCCGAGGTGAATGTTGGTGAAGTATCATGCCTATGTACATCGTGGACTATGGTGAAGGGTGGCCGGTATGTCTGTGACCCAGGTCGATCTCGATGACGAGGCGTTGGCCGAGGCCATGCGGCTCATGGGCACCTCGACGAAGAAGGAGACGGTAAACGGCGCCTTGCGGGACTACGTGGCGCGGATCAAGCGACTGGAGGCTGCCGAGAAGCTGGCCGCGCGTGGTGAGAAGGGCG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGACCCCGCGCCTGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGATGGTCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5483-6793 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMP010001023.1 Streptomyces parvus strain SID7590 contig-31000020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5483 29 100.0 32 ............................. CGGCGTCGGGAGGACCTGGAGAAGGCGAAAGC 5544 29 100.0 32 ............................. TTCTCGGGCGAGACCGAGATCGTCAGGGACGG 5605 29 96.6 32 ............................G ACGACGCGCGGCGGCGCATTCAGAGCGTAGGG 5666 29 96.6 32 ............................G CGGAGGCCGACCACGGACCGCTCCACCCCCAC 5727 29 96.6 32 ............................G ACGAGGGCGAGGGCGAGGTCGCGGCAGGAGCA 5788 29 96.6 32 ............................G GAGTACACCGGATGAGCAGCCGCCCCAGGATC 5849 29 96.6 33 ............................G TCTGGTGTGTCGTGGCTGAAGGACGGGGTCAAG 5911 29 100.0 32 ............................. ACTTCCTTTTGCACGGCGGTGGACCTCAGAAT 5972 29 100.0 32 ............................. CAGCCGCCGATCCCGGCGGCTCCGGCCAGCTG 6033 29 100.0 32 ............................. GCGCCAGCGTTTATGAAACACAATCCGAAATG 6094 29 100.0 32 ............................. CTGGCAGCGGACCTGATCCCGGGGGCGAAGCC 6155 29 100.0 32 ............................. CGGCCGTGCGGTGCCTCCGGGTCCAGCGGGGC 6216 29 100.0 32 ............................. CCTCCGGCCGCGCCACGGCCCGACGCCCTGTC 6277 29 100.0 32 ............................. TGCGACTCGAACGCGGTGTACTGCTCGGTGCT 6338 29 100.0 32 ............................. ATCACGGGGCTGGGGCGCAACTGTTCGATCTT 6399 29 96.6 32 ............................G GCTGCTGACCGTCCGACGGATACGTGTGTGGA 6460 29 96.6 32 ............................G GCTGCTGACCGTCCGACGGATACGTGTGTGGA 6521 29 96.6 32 ............................G TGCGTTACGCGGCGGGCAAGTGCTCGATCGCC 6582 29 93.1 32 ....................C.......G GTCCTCGCGACGATCATCGTCGTCGTCCTGGT 6643 29 96.6 32 ............................T GCGGACAGGGACGGCCGACCCTGGCGATCCAC 6704 29 100.0 32 ............................. TGGTCCGGGCTCGCGGGCTGTTCGGGGCGCGG 6765 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 22 29 98.3 32 GTGGTCCCCGCACGCGCGGGGGTGTTCCC # Left flank : CACCCCAGCTCCCGAACACCCCGAACTCCTTGCCTGGCACGAGAACTTCAGCGCCCTCACCCACCCACCGCATCCTCATGGAATGCACCGACTGCGGCCGCCCCGGCCAGCCGGAAGCCCTCCCGGACGGCCTCTGCCGCCCCTGCCGCCTCGCCCACTCGTCAGGCGGCCACCCCTCACCCGACCCCACTGAAATCGCAACCGTCAAGGCCCACATGGCCAACCTCCGCGACCTGCTCAAACCCGTCTGACCCCAACCCGGCTGAACAACCCGCCGCCGCCCGGCCTACCGCTCCCAGCAAGACCAACACACGGACTCCGACGGGCCGAAAGCCACCCTTCTCCCATCCGAGGAAACCTGCGCCGCACGGTCGGCGGAGGGCAGAATCGCCATTGACGAACTTCAACTGCGACCACCGCAGCCCAGGGGCGATATGTCCGTTCCTCAAGAAGTGAACGAAAACCACTCCCGGAGCGCATAAAGCCGCAGGTCACGAAGT # Right flank : CCTAGGGCGTGTGTCGAAAATCGATCTTGGCCTGTGAATGATCACGGTTCATGGGTAGGGGCGATCTCACGGACGAGCAGTGGGCAGTGCTGGAGCCGTTGTTGCCGAAGGGTGCCAGGCTGGGGAGGCCGCCCTTCTGGTCTCGGCGGCGGCTGATCGACGGCATTCGATTCCGGGTCCGGACCGGTGTTCCGTGGCGGGACGCCCCCGTCGAGTACGGGCCATGGGGCCGAATCTATGACCTGTTCCGCCGGTGGCAGCGGAACGGGACCTGGCACCGGATTCTCACCCGCCTCCAGACCCGGGCCGACGTGAAAGGCGCAATCGTCTGGGACCTGAGCGTCGACTCCACGGTCTGCCGCGCCCACCAGCACGCGGCCGGAGCCCGCAAGCAGGGCGACCTGCAGAAGGAACCACCGGGCGGTGTGTTCACCGAACCCGGAGATCATGGGCTGGGACGCTCGCGCGGCGGGTTCACCACCAAGCTCCACTTGGCCATC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 8566-9019 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMP010001023.1 Streptomyces parvus strain SID7590 contig-31000020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8566 29 96.6 32 ....G........................ CATGGTCGGCGTGAACAGCGTTGCGAACTCGG 8627 29 100.0 32 ............................. GACCCGGTGATCTTCACCTGGTCGTTGCTGAT 8688 29 100.0 32 ............................. ATCAACGGCCGTGTCGGCTGCCCCTCATGCCT 8749 29 100.0 32 ............................. GCGCACGGCGGCGGCCTGTCCCGTCTCGCCGT 8810 29 96.6 32 A............................ CTCACCGATGGGTTCACCAGCCTCCTCGAACA 8871 29 93.1 32 .C...........T............... ACCGCGCTGGCGGAGTTCCGTGACGCCCGCGC 8932 29 79.3 30 ..C....................TCCTT. GAACTGCCACTGGTCCCGCTGTGGGCTGAC 8991 29 82.8 0 ...........GT.........C....TG | ========== ====== ====== ====== ============================= ================================ ================== 8 29 93.5 32 GTGGTCCCCGCACGCGCGGGGGTGTTCCC # Left flank : CGGCGCCAGGACGGGTATTCGGTGCTTCCGGATCGTGCCAGTTCCTCCATGGCCATCTTGTGGAGGTAGACACGTTCGATATCCAGGAGGCCCAGCAGGAGCCCGCCGCTGGGGAGGACGCCTGGGCACCCCAGTGCCACCAGACACGATCCAGCAGAAGGCTGCCGACCTGCATCGATGTCGTGACCCAGAAGCCACTGCCGTAGCTGTTCCGGCAGTTGTAGGCCCATGCGCAGTTCGGCGTCGTAGATGGCCGCCGGACTCCCTGATCCGCCGAGAGCAGCGGACACCTCAGGGGCATGCTTCTCAAGCCACGCGGTCACCCGGCCCCACGCCTGCCCTGCGTCTCCCATCCTCTGATGATCCATAGGCAGACCGTACTCAACACCGCTGACAATGCGGGACCCAACTGCGGCATTGTGGATTAGTCGCAACGACCAGCAACTCTGGCCACTATCGATACACGGCCTAGTGCAGACCGGCCAGCGATCTCCGGTTAC # Right flank : GAACGGCGTCGACAAGGGACGGCCGCGACGGGCAGCCCGGTCCGCCGGGCCCGACCTGCTCGGACGGGTACACGCTGCAGCCGCCACCCACGGATTCGGGCTTCCTCGTCTGCCGGCGGGCGACCACCCCGACCGAGCCAGAGGGCCCGGCCAGCACACCGAGCCCGCTCGCCGCAGGCCCGGACTCGACCCGCCGCCACTACTCATGAACGGGCCCCACCGCCACGGCGATGGGCCCCCTTCGTCATGACTATGGAGTCATCCGAGGGAGTCGATGGCCTTCACGATGAGAGCCCGTGCTGCCGCGCCGTACACGGCGGTCTGCCGCAACTCCTCGAAGGCCTTGGCGTACAGGGCTATCTCGCTGGGCTGGGTGATACGGACCCGGGCGGAGACCAACTCGACGGAGACCAGCGAGTTGTCGTAAACGTGGAACGTCTCGCGCGGCCACTGCTCGCGGTGCGCGGTCGACGGGATAACGCCGAGCGACACGGCCGGCA # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 12352-12932 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGMP010001023.1 Streptomyces parvus strain SID7590 contig-31000020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 12352 29 100.0 32 ............................. ATCAGGGCACAGGTCGGCCGGGGCTTCCCGTG 12413 29 100.0 32 ............................. TCGCCGCCGCCGAGGAGGAGCTCGCCGCCCGC 12474 29 96.6 32 ............................G GCGGTGGCCGAGGAGCAGCGCACCCGCCCCAC 12535 29 100.0 33 ............................. GTGCGCCGTACCTCGGGATAGCTGTTCTTCGCG 12597 29 100.0 32 ............................. TCGGCGTATGGGCGGTCGCCGTCGTCGTGGGC 12658 29 96.6 33 ............................T GGGACATCCCACCTCCAGCCCTGGTGACCATGG 12720 29 96.6 32 ..........................A.. TCGTCCTCGATGGCGATCTCGCGGCGCTGGAT 12781 29 89.7 32 ...........G..TC............. GAGCCGGGCCATGGCAACCCAGCCACCTACCC 12842 29 89.7 32 .............CT......A....... AGGCCGCCGTACAGGACCGACTGCATGGTCGG 12903 29 82.8 0 ...........G.CT......C..G.... | A [12909] ========== ====== ====== ====== ============================= ================================= ================== 10 29 95.2 32 GTGGTCCCCGCACGCGCGGGGGTGTTCCC # Left flank : TAGCCCTCGCCTCTCGCCCGGCGGGGGCTGGTTCCCGTTCAGCTCACTGACCAAGTTCTTGAGCGGTACGCCGACCGCGTCGCGATGTGGTCCCGCACCGCCCGCGACAACGAGTGGTGGATCACCTACCTGGCCGCCGAGAAGGCCGCCCGGCGCCGCAACCCCTGAGGGGCCCCGACCCCGTCGTAATCGCGTCCGCCGAAGCCCCACGTGGCCAACCTCCGCGACCCGCTCAAACCCGTCTGACCCCAACCCGGCTGAACAACCCGCCGCCGCCCGGCCTACCGCTCCCAGCAAGACCAACACACGGACCCCGACGGGGGGGCGATAGCCCCCCTTCCCCCCTTCCGAGGAAACCTGCGCCGCATAGCCGGCAGAGGGCAGAATCGCCATTGACGAACTTCAACTGCGACCACTGCAACCTCAGGGGCGATATGTCCGTTCCTCAAGAAGTGAACGAAAACCACTCCCGGAGCGCATAAAGCCGCAGGTCACGAAGT # Right flank : CGCACCGCCCGCGACGACGAGTGGTGGACCACCTGCCTGGACACCGAGAAGGCCACCCGGTCCGCAGCCCCTGCGGAGCCCCCGGCCGCCCCGGCACTGCCCGCACCGGCCTGCCGGTAGTCCTCCCCGGCGGCTCTGGCGCCCCTGCCTCGCCGCCCGCTCGTCAGGGGTCGGCCCTCCCCCTGACCCCGCCCAAATCGCTTCCGTCAGAGCCCATATGGCCAACCTCCGCGACCTCCTCAAAGCGCCCTGGGGAGGCAGGCAGGACACCCTCAGGGCGTAACGATGGCGAAGCCGGGGTCCGGGTCGTCGAGGACGGACATGAGAATGGTCAGGGCACCCGGGTCGCCGGTGTGTTCGATGCCGTCGAGTCCCAGGCCGCCCAGCAGGTCCATGAGTTGGGGCTGGGTGAGGGTGAGCGTGAGATCCGCGCTGTCGGCGGCAGAGCCCTCGGCCACCGGGTGGTGCACCAGGACCCCGTTGCGCAGGCTCGTCCGATA # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACGCGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //