Array 1 244-9 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JUIH01000120.1 Lacticaseibacillus rhamnosus strain Lr108 contig00128, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
       243	    36	 100.0	    30	....................................	GGAGACTGGCAAGAATACCACGCTGACACT	
       177	    36	 100.0	    30	....................................	TAATCACATGGTTAATGCTGGCATCGTTGG	
       111	    36	 100.0	    30	....................................	CATTGATGGCGGCTTTGACATAGTAACGAA	
        45	    36	 100.0	     0	....................................	|                             	A [22]
==========	======	======	======	====================================	==============================	==================
         4	    36	 100.0	    30	GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC	                              	       

# Left flank :   TCAAAATAAACTTTTTAAAGGGTTCTTTT
# Right flank :  CGCCAAGTT

# Questionable array : NO	 Score: 5.86
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [6.7-40.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//


Array 1 7690-7457 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JUIH01000132.1 Lacticaseibacillus rhamnosus strain Lr108 contig00140, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      7689	    35	  97.2	    30	-...................................	CCAGCAGGATTCGTGCTACCACGACGGCGC	
      7624	    36	 100.0	    30	....................................	CCGCAAATTGCTATCATTAGCAAGTTTTTA	
      7558	    36	 100.0	    30	....................................	TGGCATCGTTACTGAAAACAGAGTAGGTTC	
      7492	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         4	    36	  99.3	    30	GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC	                              	       

# Left flank :   |
# Right flank :  TTCACTCTCTTCCATGTTCTAAAGTGTAGAGTCTCAGGCAAATATCAGATCAAAAAACACCTTCAGTGAAGACTCGCCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAGCAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACCGACCTCAAAGAAATTCGGCACATGTACCAACAAGCGTTCAAATCCCTTTACGACAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGGGAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAATCGTTGAAGATAAACGCATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGCCCGTATCTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAA

# Questionable array : NO	 Score: 5.82
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:60.00%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//