Array 1 15158-16319 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNXT01000031.1 Legionella birminghamensis strain CDC#1407-AL-14 Lbir_ctg032, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 15158 32 100.0 35 ................................ TTTTGTAAATATTGGTATTCGAATCAAAAGAATTT 15225 32 100.0 36 ................................ CCAGTTTTCAGTATCAAACTCGCTGGCTACACTAAT 15293 32 100.0 36 ................................ ATTTTTAACTCCCCCCAGACTATAGATAACCATAAT 15361 32 100.0 33 ................................ TGTAGCATCTGATAAAACCCTTACTTTGCCAGA 15426 32 100.0 36 ................................ ATGTCATAGTGAATTAATATCATGAGTATATGCCAA 15494 32 100.0 33 ................................ GCTACTCCTTAATCTCTTCTCTCATTTTAAGTA 15559 32 100.0 34 ................................ AACGATGAAACTAGGGCGTTGCCCGTCTGAGGTT 15625 32 100.0 33 ................................ AGTATCCGCTCAAAATAGAGTTAGATATTATTG 15690 32 100.0 34 ................................ AAGTTAAAAATGCCTGAAGGTACCAAAGACCAGC 15756 32 100.0 33 ................................ AAGAATGTGCCACAGAATAGTACTTTTTCAGGA 15821 32 100.0 33 ................................ TTGTTCTGTCAGTGTCACGCTATATAAGTCGGC 15886 32 100.0 33 ................................ TTTTTGCTTGAACAAATTAAGTGCTGCAGCTTG 15951 32 100.0 34 ................................ AAATTTGGAACTCTGAATGTACCAACTCCACCAG 16017 32 100.0 37 ................................ TAAAAAACCAATGGTATTTGCAAGACTATATCGAATA 16086 32 100.0 34 ................................ ATTATAATGTACACCGTCATAATGAAAATCAAGG 16152 32 100.0 36 ................................ AAGCTGTGGCGTGTTCTGCTGTTGCTCACCTAAAAG 16220 32 100.0 36 ................................ GTTTAATTTTAACTTTACATTCGTGCCCATTATGTC 16288 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 18 32 100.0 35 GTCGCGCCCCATGCGGGCGCGTGGATTGAAAC # Left flank : GGTGAAATAATGTTAGTGCTCATAACTTATGATGTAAATGTCACCTCAAAAGACGGACAAAGCCGCTTGCACAAAGTTGCAAAAATTTGTCTGGATTATGGAATGCGGGTACAGAACTCTGTTTTTGAGTGTGAAATTGATCCCGCACAATTTGCCCTGCTAAAAAGCAAATTACTCAGAACAATTAATCCTGAAGTGGATAGTTTGCGATTCTATTTTCTAGGAAAAAAGGGAAGGAAGAGGATTGAGCACGTAGGTGCAAAGCTTGTTCCCGACCCACTTCGGTCGCATCTGATTATATAGTTATCAGGAAGAAAATTTTTTCCGCTAAACTGTAGTAGTCAGAAAAATCCGGTTGGATTAGCGGTTCCTTTAGTAATTGATTTATTTAACTAATGTAAAAAACTCTTTAAAAATTTGACGCTTCTCTAAAAAAATCGCTTCGATTAACGGAATCAACGTGAATTCTACTTATTATTCAATATAATTAAAATGAGACA # Right flank : CTTTTTGACATTGTATGTTCCGAGTGCCGGAACAACGTGGCGCCCCACGCGGGCTGAGGAATCCCCTCATTTTTTCATTCAAAAAAACGTACCTTATTAGGGTCAAAATGACTTTAAATAATGTCGTTTCCGCGTAGCGGAAATCCATCTTGCAAACAAAGTTAGGAATTATCTTGAGAAATAGGGTGGATACCACCGAATCCCCGCGGCTTTGACCGCGGGCCCACACGAAGCCAATTTAATGTTAAGCACACTTGTTTATGACTACCCGTTAAATCTTATTTTTTGGCAACATTCAAACTTGTTTGAGGACCATGCTACTCCAACAGGCATGGGCCCCGCGGTCAGTGCCGCGGGGATTCGGACGGGGAAAATATTGGTGTAGATAGCTATGGGCTGCGACCGCGGGCTAAGGATGTTTTATCAACCTCAGTTTCCGTTGTCTAAACAGGGGGATTTCGTTAATATCGCTAAAGAAAAATTACAAGAGACGATAAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCATGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //