Array 1 4-2471 **** Predicted by CRISPRDetect 2.4 *** >NZ_BFFA01000067.1 Klebsiella pneumoniae strain TUM14696, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4 29 100.0 32 ............................. AACTTCCGAACGAGAAGTGGAGGCATGTAACT 65 29 100.0 32 ............................. TCGGCGTTGATATTAACGGGATAGACAGGAAT 126 29 100.0 32 ............................. TGGCTGAGGTCGTAGTTGTGAGTTAATTAGGC 187 29 100.0 32 ............................. AAGAACCTTTCGATCGCTGCAATTATCTACGC 248 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 309 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 370 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 431 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 492 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 553 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 614 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 675 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 736 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 797 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 858 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 919 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 980 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 1041 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 1102 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 1164 29 100.0 32 ............................. GATTGTCTGACAGATAATGCAGCGCAATGCGC 1225 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 1286 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 1347 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 1408 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 1470 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 1531 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 1592 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 1653 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 1714 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 1775 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 1836 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 1897 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 1958 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 2019 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 2080 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 2141 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 2202 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 2263 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 2324 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 2385 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 2443 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GGAG # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //