Array 1 130527-131017 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKA010000003.1 Clostridium tetanomorphum strain DSM 4474 Ga0454106_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 130527 30 100.0 36 .............................. ATATAATTGCGTTCAGTAAATCGTACCATCCTGTGT 130593 30 100.0 35 .............................. CACATTGGTGGACTTAATGCAAGAAGAATGTTTGA 130658 30 100.0 36 .............................. GCATATAAATCATTGCCCATACTAAGCATGAAGTGA 130724 30 100.0 35 .............................. AAGTAATAGTCCTAGATATGAAATACATAAAAATA 130789 30 100.0 36 .............................. TTAATTTGATTTATAACTTTGTTATTTGCATCTCTA 130855 30 100.0 35 .............................. AAGAACTACTGATGCTTGATAGAGAATTAAGTTTT 130920 30 96.7 36 ................A............. CACGTTGCTTTACAATGATAATAAGGTCTTTCTAAA 130986 30 90.0 0 .C..............T..........T.. | TA [131010] ========== ====== ====== ====== ============================== ==================================== ================== 8 30 98.3 36 GTTGAACATTAACATAGGATGTATTTAAAT # Left flank : CTAGGCAATACTGAAAATATTCATGAAACTTTAATAAAGATTTTATCCAATAAAGCAATCTTTGGTGTTGATTTATATGAAGTAGGTTTAGGTGAAAAAATTGAGAACTACTTTAAAGAATTAATTGCTGGAGAAGGTGCTATTCGTTCAACCTTAAAGAAATATTGTAAATAATTTATATGCAAAGCGCTGAAAAATTTGTTTTTCAGCGTTTTGTATTTATTAATTGGAAATATTTTTTTTACTATTAGCATTACAAAAAATTTTCAATTAAGATTTTTATAGAGCAGCAACCAAAAAAGAAAAATCTATTTTTATAGCAATTTTACCAAGTGAATTGAAAAACAAAAGTAGTGTAACCTGAGTTATATCAGTGGTTTATATAGGAATTTTTATAGAAATTTCTATTTTATAAAATCACCTGGTAAATTTTCTAAGAAACCTTGAGATTTCAATGGTTTTGTGCTATTCTTAATTTTAAGGAATGTTGATTTTACAGT # Right flank : TATAGAAAAACTTCTGTATCTATGAAAAGATTAGAAAGTTTTTTGATGTATTGAGGTAAATAGAATAAAAATGTTTAATCAATCTTCCGCTTTTATGTGCTATATAAAAGCGGGAATTTTTACTTTTGGAGAGATTTTGAATTGTTGAAGTTAAATGCTGGTTTTAAATTAATGATTAAGCACATAGATTTATTACTTTGAAATTTTACATACTATTGTGTTATGTTTATAATAATTAATACGAAATTAAAAGAAGTGGATAAGTAGCTGGAAAGGGAAGATACAATGGATATAGTAAAAATAAAGGAAAAACTTAATTCAAATGAATATGATTTTTTAAGAAATAATTATAATTTAAATAATAATATAATATTGCTAACTTTAGGTGGAAGTTATTCTTATGGACTAAATAGTGAAAATAGTGATCTGGATATAAGAGGTATAGCTTGTAATACAAAAGAAGAAATATTAACTATGAAGTGTAGGGATAAACCTTATGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 193622-193915 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKA010000004.1 Clostridium tetanomorphum strain DSM 4474 Ga0454106_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 193622 30 100.0 37 .............................. GCCCTATTTTTTCTCCTAATTCTTGTTGTGTTAAATC 193689 30 100.0 36 .............................. ATCACTTCTATTGAAGAAACTAAGAACAGTAGAGCT 193755 30 100.0 36 .............................. TATTGTATATTAGAATTGTTATATAATCTTTGTATG 193821 30 100.0 35 .............................. TGTTCAATAAATCCTTCTATTTCACCTTTTATTAT 193886 30 83.3 0 ...............GA.........TC.A | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 96.7 36 GTTAAACCTTAACATAGGATGTATTTAAAT # Left flank : TGAAAGTTGAGAATGGAGAGTTGAGAGTTGAGAGTGAATAAAAATTTTACTAAGGAATTTGGTATTTTTTATAAACAGAGTTCTTGGCTTCAGAAGGAGTTTTTACTCCCACTGAAGCTTTATTAACAGAATTCTTAGGAGTTTTACTCCTTAGAAGTCGTTATCCTTTAGGGGAAATCGTTATCCAGGGATGTAGCCGCTCTTTACTCCCACTTTGAAGAAAAGCAGAGAACCCAAATCTTTGATTTGGTGTGAATCGCTTTCACAGAGTGCGATGGGAGTATTAGATCGGGTAGTCATCGGATAAATGGCAGATTATTAATTTTTCCCAAGTGAATTGCAAAATAAAAGTAGGATAAAGCTAATGATGTCAGTGTTTTACATAGTATTTTCTATAGAAAATTACATTTTACAAAATCACCTGGTAAATTTTTAAACAAACCTTGAGATTTCAATAGTTTTATGCTATTGTTAATTTTAAGGAATGCTGATTTTACAGT # Right flank : AGCAATTGAAAGTTGAGAATTGAGAGTGAATAAAAATTTTACTAAGGAGTCTGCTATTTTTTATAAGTAGCAGATTATTAATTTTCCCAAGTGAATTGCAAAATAAAAGTAGGATAAAGCTAATAATGTTAGTGTTTTACATAGTATTTTCTATAGAAAATTATATTTTACAAAATCACCTGGTAAACTTTTAAACAAACCTTGAGATTCCAATGGCTATATGCTACTATTAATTTTAAGGAATGCTGATTTTGCAGTGGTTGAACCTTAACATGGGATGTATTTAAATTGATTATGTGGCTGATATGAAAATGGGAGATTTTAGGTTGAACCTTAACATGGGATGTATTTAAATTTGCAGTAGGCGTAGCTGCTAAAGATATGGGTGGCGGTTGAACCTTAACATGGGATGTATTTAAATAAGATTAATTCTAAGAGCAATGGCAAGAAATCAGGTTGAACCTTAACATGGGATGTATTTAAATTCCTGTATATAATAT # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 194173-194530 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKA010000004.1 Clostridium tetanomorphum strain DSM 4474 Ga0454106_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 194173 31 100.0 35 ............................... TGATTATGTGGCTGATATGAAAATGGGAGATTTTA 194239 31 100.0 35 ............................... TTGCAGTAGGCGTAGCTGCTAAAGATATGGGTGGC 194305 31 100.0 33 ............................... AAGATTAATTCTAAGAGCAATGGCAAGAAATCA 194369 31 100.0 33 ............................... TCCTGTATATAATATTTAAGGCAGTAGTTGTGG 194433 31 96.8 35 A.............................. CTGGCGAGCTTAACGTTAAGCTCGGAACGGTAGTG 194499 31 90.3 0 T..........................C..G | T [194522] ========== ====== ====== ====== =============================== =================================== ================== 6 31 97.9 34 GGTTGAACCTTAACATGGGATGTATTTAAAT # Left flank : CTTGTTGTGTTAAATCGTTAAACCTTAACATAGGATGTATTTAAATATCACTTCTATTGAAGAAACTAAGAACAGTAGAGCTGTTAAACCTTAACATAGGATGTATTTAAATTATTGTATATTAGAATTGTTATATAATCTTTGTATGGTTAAACCTTAACATAGGATGTATTTAAATTGTTCAATAAATCCTTCTATTTCACCTTTTATTATGTTAAACCTTAACATGAGATGTATTTTCAAGCAATTGAAAGTTGAGAATTGAGAGTGAATAAAAATTTTACTAAGGAGTCTGCTATTTTTTATAAGTAGCAGATTATTAATTTTCCCAAGTGAATTGCAAAATAAAAGTAGGATAAAGCTAATAATGTTAGTGTTTTACATAGTATTTTCTATAGAAAATTATATTTTACAAAATCACCTGGTAAACTTTTAAACAAACCTTGAGATTCCAATGGCTATATGCTACTATTAATTTTAAGGAATGCTGATTTTGCAGT # Right flank : GCGATTGAAAGTTGAGAACTGAGAGTTGAGAGTGAATAAAATTTTACTAAGGAGTCTGCTATTTTTTATAAATGGCAGATTATTAATTTTTCCCAAGTGAATTGCAAAATAAAAGTAGATTAAAGCTAGTAATGTCAGTGTTTTACATAGTATTTTCTATAGAAAATTACATTTTACAAAATCACTTGGTAAACTTTTAAACAAACCTTGAGATTCCAATGGCTTTGTGCTATTGTTAAATTTAAGGAATGCTGATTTTACAGTGTTAAACCTTAACATAGGATGTATTTAAATTCTTATCCAAAACTCCTAATGATTTTGCCATGCTAAGTTAAACCTTAACATAGGATGTATTTAAATTGACAATCAAGTAAGAATATTGGGAGTGATTTTAGTTAAACCTTAATATAGGATGTATTATTTAAATGAAATAGATAATTAACGGCAAAAATAGGAAAAGTAGATTGAACAATATGAAGTTTTTTACATTTATTTAATGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 197042-197716 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKA010000004.1 Clostridium tetanomorphum strain DSM 4474 Ga0454106_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================= ================== 197042 30 100.0 36 .............................. AATGAAAGATAGATATAAAGACGGGTGGGAAGATAT 197108 30 100.0 35 .............................. GATAAGCCAGTATTGGTTGCAGATGTGAACCAATT 197173 30 100.0 35 .............................. GAAGCGGCTAACGAGATAAGATGGTTTAAAAAGTG 197238 30 100.0 36 .............................. CAACGTATGTAAAGTACATTTGTACGCTAAATTTTA 197304 30 100.0 36 .............................. TCTGTGAGGTACATTGTACACTCACCTTTAAATATT 197370 30 100.0 36 .............................. TTATGTCATTAGCTGTTAACTTAGGCTTGTATAGCT 197436 30 100.0 35 .............................. GACATATCAATCTCGTCTTTAAAAAAATAGGTCCT 197501 30 100.0 89 .............................. AAAAAATAAAGCTATGGGAGAACTTCTTAATAAAGAGTTGGATGTATTTAAATTTGTTTTCGTTGCTACATAGTGCGTAGCTAGTAACT 197620 30 100.0 36 .............................. TACCTCCCAATATTTGTAATTAAATTCTAAGTTTTA 197686 30 93.3 0 ..........................C..G | T [197709] ========== ====== ====== ====== ============================== ========================================================================================= ================== 10 30 99.3 42 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AACATATATATGCAGGTTTAACCATAACATGAGATATATTTAAATTAATAAACAGCTAGAAATAAACAAACTCACATAATGTTTAACAATAACATAAGACGTATTTTCAAGTAATTGAAAGTTGAGAGCTGAGAGTGAATAAAAATTTTACTAAGGAGTCTGCTATTTTTTGTAAACAGAGTTCTTGGCTTCAGAAGGAGTTTTTACTCCCACTTTGAAGAAGAGCAGAGAACCCAAATCTTTGATTTGGTGTGAATCGCTTTCACAGAGTGCGATGGGAGTATTAGAGCGGGTAGTCATCGGATAAATGGCAGATTATTAATTTTTCCCAAGTGAATTGCAAAATAAAAGTGAAATAAAGCTAACAATATTAGTGGTTTGCATAGTTTTCTAACAGGAATTTTTATTTTATAAAACTACCTGGTAAATTTTTTGGCAAACCTTGAGTTTCCAATGGTTTTATGCTATTGTTAATTTTAAGGAATGACGATTTTACAGTG # Right flank : GTAATTGAAAGTTGAGAGTTGAGAGTGAATGAAAATTTTACTAAGAAGTCTCCTATTTTTTACAAATGGCAGACTATTAATTTTACCAGGTGGATTGAAAAGTGAAAGTGGCTTAAAGTTAATGATACAAATGGTTTGTGCAGTGTTTTCTATAGAAAATTGTATTTTATAAAATCACCTGGTAAACTTTTAAACAAACCTTGAGTTTCCAATGGCTATATGCTATTATTAATTTTAAGGAATGCTGATTTTACAGTGGTTAAACCTTAACATGGGATGTATTTAAATTATAAGAAATTAACAGGTAATTGGTAATTTCTTATAGTTAAACCTTAACATGGGATGTATTTAAATTGTAATGATTCATGAGGGTTTTTATTTACTTAAGTGTTAAACCTTAACATGGGATGTATTTAAATGAAACTAAGGGACTACCTGATACCAAAATAAAAGAAGTTAAACCTTAACATGGGATGTATTTAAATTAGGTATTATTAATG # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.50, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 197974-198664 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKA010000004.1 Clostridium tetanomorphum strain DSM 4474 Ga0454106_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 197974 30 100.0 36 .............................. TATAAGAAATTAACAGGTAATTGGTAATTTCTTATA 198040 30 100.0 35 .............................. TGTAATGATTCATGAGGGTTTTTATTTACTTAAGT 198105 30 100.0 36 .............................. GAAACTAAGGGACTACCTGATACCAAAATAAAAGAA 198171 30 100.0 36 .............................. TAGGTATTATTAATGGCTATACTCCTATATTTAAAA 198237 30 100.0 35 .............................. TATTCAACCCAATGGACAAACCAAGGAAAATATTC 198302 30 100.0 36 .............................. CAACGTGCATCTTTGTATAATAACAATATGCAACCT 198368 30 100.0 36 .............................. ACAAAATCCTAGTTGGAAATTCTTATATTCGGAGAT 198434 30 100.0 36 .............................. TTTATATTTACCTCCTAATTTTTACTTAATCTGTGT 198500 30 100.0 37 .............................. TGTAAATCTCTGCCAGCCCTTACTCTAAAGAAAAAAC 198567 30 100.0 35 .............................. GTGGGTGAAGACAAATTAAAAGATTTTAAAAGAGT 198632 30 90.0 0 ...G...........A....T......... | ATA [198652] ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.1 36 GTTAAACCTTAACATGGGATGTATTTAAAT # Left flank : AATCTCGTCTTTAAAAAAATAGGTCCTGTTGAACCTTAACATAGGATGTATTTAAATAAAAAATAAAGCTATGGGAGAACTTCTTAATAAAGAGTTGGATGTATTTAAATTTGTTTTCGTTGCTACATAGTGCGTAGCTAGTAACTGTTGAACCTTAACATAGGATGTATTTAAATTACCTCCCAATATTTGTAATTAAATTCTAAGTTTTAGTTGAACCTTAACATAGGATGTATTTTCAAGTAATTGAAAGTTGAGAGTTGAGAGTGAATGAAAATTTTACTAAGAAGTCTCCTATTTTTTACAAATGGCAGACTATTAATTTTACCAGGTGGATTGAAAAGTGAAAGTGGCTTAAAGTTAATGATACAAATGGTTTGTGCAGTGTTTTCTATAGAAAATTGTATTTTATAAAATCACCTGGTAAACTTTTAAACAAACCTTGAGTTTCCAATGGCTATATGCTATTATTAATTTTAAGGAATGCTGATTTTACAGTG # Right flank : TGAAATAGACAACTAACGGCAAAAATAGGAAAAGTAGATTAAATAATATGAAGTTTTTTACATTTATTTAATGATTTTTATTGTAGACATGTAAAGATGGCTGCGTATAGTGATAATATTTTTAGAAAGTATTAAATAAAATAGCTAATTCATGTAAATTAGGAAAAGATATATATACTTTAATCTTCATAAACTTTTTTTATAACAATTCCTTTTTTAAATCCACTTCGTTTAAGTTTTTTTCTTCTTTTTAAAAGCTCCTCTTCAGAATATATCAATTCAGAGGAAATTCCAAACATAATTTTAATTAAATATGTAAAATCTCTTTTTTTAGCATAATGTATATTAATTTTTAAGTTCCCAATAATATGTATTTAGCTGAAATAAAAAATACATATAGAGATAATGAATTAACGACAAAGATATAGGACATTACTTAAAATATCAATAGCTATTCTCTTATATAGATATATACTTTAAAGTATGGTAATATATATTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 5 208400-208558 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGKA010000004.1 Clostridium tetanomorphum strain DSM 4474 Ga0454106_04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 208400 30 100.0 34 .............................. TGCAAATTGGTAGCGGATTACAAATCTTAAATTT 208464 30 100.0 35 .............................. ATATATAACTTCCTTATCCTGGGAAGGTCATGCAT 208529 30 96.7 0 .........................C.... | ========== ====== ====== ====== ============================== =================================== ================== 3 30 98.9 35 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : CTAGATTGAAAAGAAAAGTTAGTTATAGAACTGCAATTAAGTTAGATTGTTATAAGCTAATTAAATTTATGATGGAAGATAAGGAATTTATTCCGTTTAACCTTCAGGAGAAAATGTAAATGGGTAAAAATCTGAATTATAATTATGCTTTTCTTTTCTATGATGTTAATGAAAAAAGGGTTCAAAGAGTTTTTAAAGTTTGTAAAAAATATTTATCTCATTTTCAAAAGTCTGTTTTTAGAGGGGAAATAACTCCATCCAAGCTAATTTCTTTGAGAAAGGATCTGAATAAGGTTATTGATAAAAGTGAAGACTTTGTGTGTATTGTAAAATTATTAAATGATAATGTATTTGGTGAGGAGATTTTGGGAGTACAGAGCAACAATACTGGAGAGGATTTAATAATTTGATTTTACCAGGTGAAATATATTTTAAACAAACCTTGAGTTTCCAATGGTTTTGTGCTATTGTTAATTTTAAGGAATGCTGATTTTACAGTG # Right flank : TACTGTTCTGTTGCAGCTAAAACATGGTATCAATGACGCCGGGGTCATTACAGAAACTGGAAAGTTTTTGTATGTTTGAAATTTTTGGTGTTTTAACAGAAGAAGAAAAACAATATGTTGTAAATAATATTGTAAAACAATTTTCATCACAAGAAAAATATAAAGAGTAAGCTTCAACTGATTTTAATACAGATTCTGATAAGATTAGTGCACCAATTAGATTGGAGAATAGTTCAGATGTAATAAAGGATAAAGTAGATAAAGGACAAGCAACTATTGACCATAAGATAAAAGTGTGAAAGAAACTAAAAAAAAGCAGAAGCATTTTGAGAATTGTCTAAAAAATATAAAAATAAAGCTAAGGAAATCGAAGCAGAATTGGCAATGTGCTATTTAGGAGGCATAGAGACAAAAAAGATATTTAAAAAGCATTTTCTTTGCTTGTTAAGGAGTATATGCAAAATCAAATAAAGCATTACAATTATTAGGTGATGATTATT # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //