Array 1 404525-401005 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCNO01000002.1 Thermodesulfovibrio aggregans strain TGE-P1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================================================== ================== 404524 30 100.0 36 .............................. TTGGGAAAAGATATACAAACCCCTGCGGTGAGTAAG 404458 30 100.0 39 .............................. CCATCTTAATGTTTCTTTTTCTCGGTAATATATGCGTAG 404389 30 100.0 35 .............................. ACAACCCCACCATCAAGAACAAACTGTTTAAACCC 404324 30 100.0 37 .............................. AATCCCATAAGTTGAGGTAACCCATAAGAAGTCGCCA 404257 30 100.0 35 .............................. CTTCCTGAAAGAAACCTGATAAGAAAAAGTCTGAA 404192 30 100.0 37 .............................. AATCAATATTAAAGAAAAGAAACTCAACTGAAATTGA 404125 30 100.0 39 .............................. TCTAAAAATTCATCAACACTCATATGCTTTACTTTTATA 404056 30 100.0 40 .............................. AACTTTGCCACTGATATGGCAGCCTCTTCATATGTGACTC 403986 30 100.0 36 .............................. TGGTATTCATGACAGCACAATTTAGAAACTTTCCCG 403920 30 100.0 35 .............................. CTCAGAATCTGTCTGATATCCTGATGAGATGCTGT 403855 30 100.0 40 .............................. AAGGTCAACCAGGTTCAGGCAAGTCTTATTATGCGGTTCA 403785 30 73.3 35 .....................CTG.CTCTT ATACACATCTCCGNNNNNNNNNNNNNNNNNNNNNN 403720 30 100.0 38 .............................. CCCGGGCATAAAACCGAACCTGATCCAGAGTTAAGCCA 403652 30 100.0 36 .............................. AAGAACTCTAAAACAAATTCTGGTAAGCCTTCATTT 403586 30 100.0 36 .............................. TTGTAGATACGGGGAGAACGGATACAAGTATAGGGG 403520 30 100.0 38 .............................. ATTTAAGATATGCAGACAGCTTAGAAAAAAAGGTATTA 403452 30 100.0 36 .............................. CTCATATTGGAGTAGAAGGAACTGTAAATTGGCATT 403386 30 100.0 37 .............................. CGAAATCCATTGCATAACTTTTGTGCATATTGGATAG 403319 30 100.0 36 .............................. ACCTTGAACCAAAACCAGACATAGTTCCATTGTGGA 403253 30 100.0 38 .............................. CAATAACAGTCACCATTTTTACTCAACTTACCAGAAAA 403185 30 100.0 35 .............................. TGGCAGCAATGACGAGGCTGATGAGCAGGCAGGAA 403120 30 100.0 36 .............................. TAACCCTCTTATAATTATTTGAACGCATAAAGTTCT 403054 30 100.0 37 .............................. CACCATCCCATAGAAGATTTCCCAGAACAATCGCTAT 402987 30 100.0 41 .............................. TCACTTTACCACCAGCCCGAGAAATATACTGTTTTGCACGA 402916 30 100.0 35 .............................. GCAGAAAGAGATGAAAAGCTCGGCAATGTTCTCAA 402851 30 100.0 36 .............................. ATGAGATGCTTGAGGATTTTGAAGCTCAAAGACTCG 402785 30 100.0 122 .............................. AGATAAAAAAAGCAACAGTGGAGATGGCAACCTCCATGAACTCATCTTCCGCTTTAACAGCAGAAGGTTCAGCCAGCCTGGCCTGTTGCTTATATATATTATACCACTATACCACATTTTAA 402633 30 100.0 38 .............................. ACAAAGAAGCGTATCAGTATGCACCTGTTGAATTTAAA 402565 30 100.0 36 .............................. CCCAAAAAACTCCTCCAACACTTCCATAGCTTTCTC 402499 30 100.0 36 .............................. CTTGAAGGGGGGTCTGAAAAACCTCAAGAATTACTT 402433 30 100.0 36 .............................. TTTTTCAGTTTGCTTCGCTGTATGCAGTATATATAA 402367 30 100.0 36 .............................. ACACATAAAAATAACACTCATCAGATATACATACAG 402301 30 100.0 36 .............................. TCCAACTCCGCACCACCTATCGCATCCTCAACCAAC 402235 30 100.0 36 .............................. TTATCTAAAACATATTTTTGCGATATAAATGGTAAA 402169 30 100.0 37 .............................. TTATTCTAGTGATTCATATTACTGCGATTGTAGTGGG 402102 30 100.0 36 .............................. CAAGCAGGGTCTATATAAAGTTGATGTTCTTAAGAA 402036 30 100.0 37 .............................. TGGCTGGACTTCTTTCTGGGGTCCAGCCGTTATTTGC 401969 30 100.0 37 .............................. AATAAAAAACTTCTTGATATTATAAATAAAGTAATAA 401902 30 100.0 37 .............................. ACTCATCACCAAAAAGCTTATGCTCAATCCTGAACAA 401835 30 100.0 39 .............................. CGAACTGCAAGCGTTCATTTTTGCATCAACGATATGATG 401766 30 100.0 37 .............................. TTTTTTGTTCCGTTGGTGCTTTTGGGTATATTTTTGA 401699 30 100.0 36 .............................. TATTGCACTGAATATTGGCTTTCTGATAGGTTAGCA 401633 30 100.0 38 .............................. GGAACATCAATTACATCAGGCGCGTAATAATAGAAACA 401565 30 100.0 35 .............................. GCTTTATACCTGAAGGCAAAACTGGGATAATCGGC 401500 30 100.0 37 .............................. ATTTGATAACGCAAAATGGGGTTGTTCCAGGGTTTTT 401433 30 100.0 37 .............................. GCAATTATAGTGGGGGTAAAATGAAAAAAATAATAAC 401366 30 100.0 37 .............................. ATCAAACTTCAAGTAATACTTTAACTGGTTCTAATCA 401299 30 100.0 37 .............................. CAATCTGGGTTTCCCTTCTATGACTGCATGCTCTGCA 401232 30 100.0 36 .............................. AAAGAGTAATGAAAACAAAAAAAGGCAACACTCTTG 401166 30 100.0 38 .............................. GGGTCACAGGCGAAGCGAGAGCCAATGTTCGGGTTCAC 401098 30 100.0 35 .............................. CTGCTAATCTACGACCCCCTTCTGCCATTGCACCC 401033 29 93.3 0 ......................-......A | ========== ====== ====== ====== ============================== ========================================================================================================================== ================== 52 30 99.4 38 GTTGCGAGCCTACCTATGAGGAATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGATACAGAAAGCGAGAACAAGTGGACAGGATTTTTACAGAATCTTCAGACAAGGGGATTAACAGATGATACATTAAGTCTGATAGTAACAGATGGGAGCAAAGCTCTTGAGAATGCAGTAGATAATGTATTTCCTCTTGTATTGAGGCAGAGATGCTGGGCACATAAAATGTGCCCTTTTATGTCAAGTGGAGAAAATG # Right flank : TAGCCTATTTAAAGGAGGCTTAAAAAATGCCAAGACCAGATCCAGGAACATTTGTGGATGGGGATTATTTTCAGTCCAAGCGCTTAATGTTTCTTTTTACTCATTTTTATGAACCGCCATGTTTTGAATGCAAGTATTTTGATGAAGAAGCGTGGACATTCTATGACATCAAAAGATGCGATGCTTTTGATGAGATTCCTGATGAGATATGGTCAGATAAAAATGACCACAAAAACTCCTACCCTGGGGATAGGGGGATTAAGTTTGAGGAATACTTATAAGTTAAAAATTTTTCAGGCAAGCTTTCCTGTGAGTAATTAAGAACTAATATACTAAAAAATAAAAGCCAAGCGAGCTTAATTGAACGGAAAAATCCAGAAGCAATTGATAGGAGCTTAAAAAATTTATGTCATAAAATAAAAGCGAAAAAAAGGCAAAAAATCAAAGAGCAAAATAAGGTGACTGGAGAAATTAAAACCATATTTGATTACGATCCCACA # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA // Array 2 408543-406706 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCNO01000002.1 Thermodesulfovibrio aggregans strain TGE-P1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 408542 30 100.0 36 .............................. AGTACCCACTGGTGCATCAACTATGGCTACTGCCCT 408476 30 100.0 36 .............................. AAATCGTTTGATTTTGATTAAAATTCGTTTGATTCT 408410 30 100.0 35 .............................. CCTTGTATTTTGCGAGGATATCCTCTCCTTCTACT 408345 30 100.0 37 .............................. CAAGTTGCGAGGTGATTTCTGATGACTGCATTGCCTG 408278 30 100.0 37 .............................. TGTTTTAGAACTATTCCGTCTTGAATCGCTTGGAGTA 408211 30 100.0 38 .............................. AGGATTTTGTATTTTAAAAATATGTCTTACCAGCCCCT 408143 30 100.0 35 .............................. TACAGTTGAATCAGGAACTATCAAAATCCTTCCAG 408078 30 100.0 38 .............................. TAAACCCACAAGTCAAGAATCTCGTTTCTCGGTCTGAT 408010 30 100.0 40 .............................. ATTTGATACTGCTGCATCATATCCATTTAAGATTCCCCAG 407940 30 100.0 38 .............................. TTGTTGGAGTTGAAAATAAGCCAATTTTTCTATTCCAG 407872 30 100.0 39 .............................. AGCCGAGAGAAGATCATGTCTTTTGCAGTTGATACTCCG 407803 30 100.0 36 .............................. AGGCTATTCACTGAAGTAATCCAGAAAATGAGTTCA 407737 30 100.0 36 .............................. TGAACTCATAGACTTTCTTTGTCATGTACCCAGAGT 407671 30 100.0 38 .............................. TAAATTTTTGGATTTTTAAGCTCAGCCTTTACCTCCGT 407603 30 100.0 36 .............................. TCGGATACCATGTGGATTTCCATAGATGCTTACTGT 407537 30 100.0 36 .............................. TATATTGTCCTGAGCGATAGTAAAAGCCATAAAAAT 407471 30 100.0 38 .............................. ACGGATATTGTGGATTGTCCTGCCATAAAAGTCCCATA 407403 30 100.0 37 .............................. CATATACATCTACCTCAACCCTCTGCACTCCATACAC 407336 30 100.0 38 .............................. TATTTCCTGCTCCTATATGAAGCACATCTTTTTGACAT 407268 30 100.0 37 .............................. CCTTTTTCCTCTATCGTATAACTTACAGGTTTCACTA 407201 30 100.0 35 .............................. AGTAAAGAGGAATTTGAAAAAGCGTTTATGAATGA 407136 30 100.0 37 .............................. GTTGATAAGGAGAGGAGTAGGTTACAGAAGCAGAATT 407069 30 100.0 38 .............................. TGCATTTGATAGATGTAAAAAATATTATGCATTTGTAT 407001 30 100.0 36 .............................. TACTCATTCCATTCCCACACCCCTCTATCACACTTA 406935 30 100.0 38 .............................. AGGACACCGAGTGGAAGTTGGATGAAGTTCAGAGCAGA 406867 30 100.0 36 .............................. ATAAAATGTGCCCTTTTATGTCAAGTGGAGAAAATG 406801 30 100.0 36 .............................. TTGGGAAAAGATATACAAACCCCTGCGGTGAGTAAG 406735 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 28 30 100.0 37 GTTGCGAGCCTACCTATGAGGAATTGAAAC # Left flank : ATAATTAATGAAAATGAGGATTCCGTAATAATTTACACATTCAGGTCTGCATGGTATACAAACAGAGAGACAATGGGAGTTAAAAAAGGAGGAGAAGAGTTGATAATTTGAACCTTGAACTTTGAACTTTGAACCTTGAACTTTGAACTTTGAATAGCCCGCAGGGCTGTTGCCCGAAGGGCTGTTTGAACCTTGAACTTTGAATATTAAACACGCCACAGGCGTTGTGGTTCAGTCCGAGCCTGCGGAGCACCGAAGGGAATATCAAAACCTGAGCACTGTAAGCTCCATTTCATTTGTTATTCCAAGCCTGCGGAGCAGGCGAGAAATCTCCTCCTTATAGAAAAATTAAATTTTCGTCTATCTCCAATAATGTAAAAAACCCTGAGGTGCGACGACAAAATTTTTCTTGAAAAATCAATAAAATTTTGATAAAATTAATAAAAATTCAAACGATCATTGACAAGGCGACTTTCTTGATTTTATTATATTTTTACATG # Right flank : ACAAAGAAGCGTATCAGTATGCACCTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 25334-28469 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCNO01000003.1 Thermodesulfovibrio aggregans strain TGE-P1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================================================================================================================================================================== ================== 25334 36 91.7 187 ................A................A.G GGCGGGCTCTCCTTTGTCATTGCGAGGAGCGTCAGCGACGAAGCAATCTCGCCTCTCTCTCGTCATTGCGACCCCGAGCACAGCGAGAGGGACGCAATCTCTTCGTTTCAACTCTGTAGAAATGGAAAGACTGCTTCAGGTGGAATGCCACCCTCGCAGTGACAAATATGCTTGCTCAACACTGAAA 25557 36 100.0 30 .................................... TCAATAAGGAGGGAAAAATGGAAACAAAAG 25623 36 100.0 37 .................................... AAAAACAATAAATGAAAGGTTAAATAGAAAATGAGCA 25696 36 100.0 32 .................................... ATGGCAGAGGGGAAGGTTGAAGAGAATAATAG 25764 36 100.0 31 .................................... TCTTCAGTGTTTACTTCTGGGTTGACTATTT 25831 36 100.0 34 .................................... TTCCTACCTCTGACGGCATGAGCAGAGACACAGA 25901 36 100.0 33 .................................... AGATTCCAGCTGAAGATGGTATAAATGAAGTTG 25970 36 100.0 36 .................................... AAAAAAATACAAGAAGAAAATAGAGAAAATCAGATG 26042 36 100.0 35 .................................... ATTCGGGCATGAAGAGAGTGTCTTTGAAATAGGCG 26113 36 100.0 38 .................................... AAACGAGCAATAGAAAAACACATGTTTAAACGGATAGA 26187 36 100.0 35 .................................... TGAATATTGGCTTGCACAAAGAATAGGAAAAAGTA 26258 36 100.0 37 .................................... CGCACCTCACCACAAGAATTATATTTGGAAGTTAAAT 26331 36 100.0 38 .................................... TTAATGCTATCATGCAAGGTAGCAAAAAGCCTTTTTCT 26405 36 100.0 37 .................................... ATCCCAGGTCTGAAGAAGGACAAGGGTAAGAAGGTCG 26478 36 100.0 34 .................................... TTAGCAGAAAAGGAAGCAGAAATAGAAAAGATAA 26548 36 100.0 35 .................................... GGGATGGTTGTGGTGAACGCACCTCACCACAAGAA 26619 36 100.0 35 .................................... TTTTTGATTAAGCTGTAAAACAACATTTTTTAAGG 26690 36 100.0 36 .................................... CTCCTGCTCCTGCTGTGGAGCAGGAAGATTTACAAA 26762 36 100.0 34 .................................... CTCACCACAAGATTTGATAATTGAAGTTAAATGG 26832 36 100.0 40 .................................... GTAAAAACATTGTGGTTGATGATGTTGAAATAGGAATGCA 26908 36 100.0 37 .................................... GAAGATTTAAAAATTGAAGAGATTGAAGCGCCCGAAG 26981 36 100.0 36 .................................... AACCAGTTAAGTTTATGGGCAAATGATTTAATAGAA 27053 36 100.0 33 .................................... TACATCAGGATGCCAAGTGGGGTTCCTCTACAT 27122 36 100.0 38 .................................... GTAAAAATGAGAAATGAATTAGTAAAAAAAGCATGGAA 27196 36 100.0 37 .................................... GTGAAACATACGGCCAATTAGATTTGGAGTTTTTCAT 27269 36 100.0 36 .................................... TTATTTCAAAAGATTTATTCACATCCTGTGATGAGC 27341 36 100.0 36 .................................... ACGTCACATTTTGCACAATATTATACAGATTTTTAC 27413 36 100.0 38 .................................... AGTTTTAGAGATTATGAGGAGTTTAATCGGTTCAAGAG 27487 36 100.0 38 .................................... GAAAGGAAATGGAGAGAATGAGGGCATAAGAAAATTAG 27561 36 100.0 33 .................................... GATGAGCATGATGTTATTGAGACAGGGGCATTG 27630 36 100.0 38 .................................... ATGCAAGAAGCAAGAGAAGTTTTTGAGGAATTAAGAGA 27704 36 100.0 39 .................................... TGAAGCCCTGCATTAGCAGGGTAAATAAAAATTAAAGGA 27779 36 100.0 36 .................................... ACATTTATAGGGAGTGGGAGCAAAAAACAGGATTTC 27851 36 100.0 37 .................................... GGAGGAGTAAAATGGAAAACAAGACTAAGATTATTGA 27924 36 100.0 37 .................................... TCTCATAAAAATTGTAACCATAATAATATAGCCATGT 27997 36 100.0 35 .................................... TGCTAAATGAATAGGAATAAAAAGAAGCAAATCCG 28068 36 100.0 36 .................................... TTCAGAGGAGTTTTTTGATACGGCAGAGGATAGAGT 28140 36 100.0 38 .................................... AGGTTAGTTCTGGTGAGGAATGTGACGGTTGAGGAGGG 28214 36 100.0 37 .................................... TTCCTCTCAACTACCAAAAACGGAAAGAAAGCAGTAA 28287 36 100.0 36 .................................... TTTTGATGAATTTACAGGATGCAACGGTTATGAATG 28359 36 100.0 39 .................................... TTTACGCATTCCTAAGGTATTCTTTGATTGGAACGATGG 28434 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================================================================================================================================================================== ================== 42 36 99.8 40 GTCGCAATCCCTTTTAGATGAGGTCAAGTTTCCTAC # Left flank : TGACAACCTCGTTGAGCCAGTTTTATCTGTTCTTGTAAATGAAAAGGGTTACTTTGGAGGGAAGAGAGCCAATATCATCTGGTGGTATGCAAGGAAGACAATAAATGCTTTTGAAGGAGTTGAGATTGAACTATCAAAGAATTCTCCTCCGTCAATCAAGGGAAAGTTGCTGATAGATGATATTTATTCAGGTGAGATGCCAAGGTCAGCAAAATCAAAAGAAATTCCTGAATGGTTGGCTTCAAAAGGTATAAAGCCAGCAAAACAGGGAGATAAATTCTCACTACATCTATCCTTCCCAGAGAGAATAAACATAGGTGACATAGCAACAGGAGTTGTTAAATCAACAATAGACTGTCTCTATCCATTAATTGGCGGTACTGCAGGCTCTCCAGAGGATTGGAGAATAGATGAGATGTTGGTGGAAAAGGGCAATTTTTCAGATATTTTAATAAAAATATTTGCAGGAGGTGAAAAGAAAAAGAAGAAACTGTTAATCA # Right flank : CTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATTGATAATACTCACTTTGCAATTCGCACAAATTGGCTATTTTCAATAGTTTACGCATATTATTCAGTAAAGTATTGATAATACTCACTTTGCAATTCGCACAAATTGGCTATTTTCAATAGTTTACGCATATTATTCAGTAAAGTATTGATAATACTCACTTTATTTGCTGTAACAATAAAACACAAGCCCTGTCAACTGAGTTAGATTCATAGCCTTTCAAAATAAATACAAACCAGCCTTGTCAAAGAGCGTTTTATAAAATAAAACCATAAAAATTAGATAGATGTCAAGGGTATCCAA # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.34, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCCTTTTAGATGAGGTCAAGTTTCCTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 37962-38432 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCNO01000003.1 Thermodesulfovibrio aggregans strain TGE-P1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 37962 36 100.0 38 .................................... ACAAAGTAACTATATCGGGAGTGGAAGAGGCTACTCCC 38036 36 100.0 37 .................................... ATTTTAAGGAGTATAGCGGATGTTACGGCAACCAATT 38109 36 100.0 35 .................................... ATATAGTCGTAAGGTGGGGTTCGTATGTTGATGAA 38180 36 100.0 34 .................................... TGTGCGGGGGAAAAGAAAGGGCAGGGGTAACCTT 38250 36 100.0 38 .................................... AAAATGAATAAAAGAGAGATCAGGGATAGGTTAGCAAG 38324 36 100.0 37 .................................... ACCACTAAAAACGGTAAAAAAGCAATAATAACTGAAA 38397 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 7 36 100.0 37 GTCGCAATCCCTTTTAGATGAGGTCAAGTTTCCTAC # Left flank : GACATTGTCGGTAATTTTTCTTTATAATGCAGCCATGAAAACTATTAAAAAAGAAAAATCCCAAGCATTAACCCTCAGAATTCCTAAATCTCTCCATGAATCTCTTAAAAAACTTGCCAGCGAAGAAAAAACCACATTGAATCAGCTCTGTCTTTATCTACTCGCAAAAGGGTTAGGGCAGAAGGAGAAAGATTGAAGGCTCTCGTCATCAAACAGCCCTGGGCAAATCAGATTCTCTCTGGTGAAAAAACTATTGAGTATCGTTCTTGGAACACAAAATATCGTGGTGACATTCTCATTGTTTCCGAAGGTCAAGCAATAGGCATTATGACCATCTCTGATGTCAGATATAACCGCCAATCTGGCATGTATGAGTGGGTTATTTCATCAGTTAGGCGCATCAAGCCTTTTTCTGTGCGTGGCCGATTAGGATTGTTCGAAGTTCCCTACCATCCACATACCGATTATCAGACAAACCAAGAGCATCGTTAAACTTTTTA # Right flank : CTGCACCCCTTGTTTTTTCTCTTTTTTTCAATGAGTTACAAGGAGGGTTGTGCAGATTTTTAAACAATTTTTGAGCAATGTATAAGGCTCAACGTATTGATAATACTCACTTTGCAATTCGCACAAATTGGCTATTTTCAATAGTTTACGCATATTATTCAGTAAAGTATTGATAATACTCACTTTATTTGCTGTAACAATAAAACACAAGCCCTGTAGTCTGAATATGATTTGTGCCCTTTCAAAATAAATTCAAGTCAGCCTTGTCAAAGAGCAATTTTATAAAATAAAACCATAAAAACCTATTCCATGTCAACTATCTCATACTTGCCGAGCCCAAAACTTGTTCCCTTGCCTACATGAAGTATCTCGCCTGCTTTGATATATGAAACAAAGGGTGTTAAATGTCCTGAATAGGTAATCTCTCCTAAAATTCCTCCGAGTTTCATTCGAGTGTTCTGTCTTGACGAGTATCTTTCCCAATCGTACCAAAAGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCCTTTTAGATGAGGTCAAGTTTCCTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //