Array 1 10781-11708 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386877.1 Desulfovibrio gigas DSM 1382 = ATCC 19364 strain DSM 1382 G450DRAFT_scaffold00059.59, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10781 28 100.0 32 ............................ TTACTCGTGCAATTGCAGGAGGTCCCGTGTCC 10841 28 100.0 32 ............................ AGCCACACGAGGTGCGACGGCGTACGCCGCGA 10901 28 100.0 32 ............................ AGTACATAAGGAATTTGTGGAAAGTATTCAAT 10961 28 100.0 32 ............................ TCCCGTCGCTTGACCAGCCCCGGCAGAGTGCG 11021 28 100.0 32 ............................ AGTCAGAGGGGGCACACCCGAGGTACGCATGA 11081 28 100.0 32 ............................ ATCCCTGGCGCGGTGGAGATCACCGGGGCTAT 11141 28 100.0 32 ............................ ATACTGCAACTGCACTGCAACTACAGGAGTAC 11201 28 100.0 32 ............................ TTTATAGATATATTTTACTTCAGTGAATACGT 11261 28 100.0 32 ............................ TTGCACACTCCGAACCCGACGAACACGACCGG 11321 28 100.0 32 ............................ GTGAAATTTGTTACAATAGCAAGCCGAAAACG 11381 28 100.0 32 ............................ AAAGTAAGCTACAACAGTTTTCCAAGTGTTAT 11441 28 100.0 32 ............................ TTTCCAATCTAATTTATCTTGAAACTCACGTA 11501 28 100.0 32 ............................ ATGCAGCGAAACACGGGGGACAACAAAGCCCC 11561 28 100.0 32 ............................ GTAGTACAACCCATGTGTATAAGCCGACACGC 11621 28 100.0 32 ............................ AGCCGACCGCCGGGCATCGCCGGGACGCAGAT 11681 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 100.0 33 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-1.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4257-389 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUBO01000073.1 Desulfovibrio gigas DSM 1382 = ATCC 19364 strain DSM 1382 G450DRAFT_scaffold00069.69_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4256 28 100.0 32 ............................ ATGCCTATCAGGTTGTCCATGGCGTCAGTTAC 4196 28 100.0 32 ............................ ACTGTCGCTGGCAGAGCTCCTGAATTTCCCCG 4136 28 100.0 32 ............................ AGGCGGCAAACCACCCTCGATGGCCTCGTGCT 4076 28 100.0 32 ............................ ACGAGCTGCTGACGCAGCCGGGGCTGGGCGTA 4016 28 100.0 32 ............................ ATCGCAATTGCGCAGCTGTCATCGGGTTGCAT 3956 28 100.0 32 ............................ GAGCTGGTCAATCTGGACTGGCAGGATGTGGA 3896 28 100.0 32 ............................ GCCCCCGTTCCGGCCGCTGAGTATCCGGCTGC 3836 28 100.0 32 ............................ ACTTCGGCCCCGCCGAATTGATGGATGGCGGC 3776 28 100.0 32 ............................ ACCGCGGACACGCTTTCGCCCAGGGAGCGAAA 3716 28 100.0 32 ............................ ATACCGTGCAGGCCTTCAAGGCCGTGGGCCAG 3656 28 100.0 32 ............................ TCTATGCCGGCGGCACCCCGGCCGAACGCTTT 3596 28 100.0 32 ............................ GATGCAGACACCGGCGGCTATCGGAATAAGCA 3536 28 100.0 32 ............................ ATCACGCGGTGGCGCAGTGGGTTATGCTGCAC 3476 28 100.0 32 ............................ TGCGGCGGGGTGGCCCGCACCGTGTACGTCGC 3416 28 100.0 32 ............................ ACCTCAAACACGCCCCAGACAGGATGTTCGCT 3356 28 100.0 32 ............................ AACATCTCCATGAGAATGAACAGTGGCGACGT 3296 28 100.0 32 ............................ AAATGCTTGCGTCGTGTCAATGATCGTGCGCA 3236 28 100.0 32 ............................ TGCCCGGGCTGATCCCAGCTCAACTGCAGCTG 3176 28 100.0 32 ............................ GATCATAGAAGTTCTGCATGTGAGACACAAAC 3116 28 100.0 32 ............................ GTCCGCGCCTGCCGGCCCCGCCGGGCCTTGTT 3056 28 100.0 32 ............................ ATCACCACGCATTGTCTGGGAGGTGTGGAAGA 2996 28 100.0 32 ............................ ATGAGCATTTCCCCATCGTTCGCCGGCCTGCA 2936 28 100.0 32 ............................ AATCTCCATGGCCAGCGCATTTTGCCGCCAAT 2876 28 100.0 32 ............................ CTGTCCGAGGACTACCGCCGCAGACTGGTTGC 2816 28 100.0 32 ............................ TATTTTGTCTACCGATTGCACGTCACCCACAA 2756 28 100.0 32 ............................ TCCCATTCCCTGATGTCTCGATTGATGCATTT 2696 28 96.4 32 .......A.................... ACCCGGTGGACACCAGCCGTTCCGCGGCATCG 2636 28 100.0 32 ............................ TGCTCAAGCAAGCCGCCCTGCCCGGCCCATGC 2576 28 100.0 32 ............................ GCCAATCCGATGCAGACAACCTGACACGCCAG 2516 28 100.0 32 ............................ TGGTCTATCCTCGACCTCGATCAACCGCTCGG 2456 28 100.0 32 ............................ TCGTCGAGCTGCAGTTGCTGGAGGTTTGAGGT 2396 28 100.0 32 ............................ CGCTCCTCGACTCGGGAAATGAATCCGAGCTC 2336 28 100.0 32 ............................ ACAGCCAAGGCGTTGGCGGCCACCATTTTGGC 2276 28 100.0 32 ............................ ATGTTCTCGTCAGAATAGTACCTCCTGGACTC 2216 28 100.0 32 ............................ ATGTTCTCGTCAGAATAGTACCTCCTGGACTC 2156 28 100.0 32 ............................ AGTAGAGGGCCGCAGGCCCGATGCATCGCGGC 2096 28 100.0 32 ............................ TCAACCAGGTCATCGTAGGTCACGCTGGCAGT 2036 28 100.0 32 ............................ GCAATTCGCTCGCAATCGATCAAGGCCGGGAT 1976 28 100.0 32 ............................ CGGGGCGGGGGCGGGGGCTGCCGGGGCGGGGC 1916 28 100.0 32 ............................ ATAGTGAAAAGGAGCTTGTATGCGATTGAACT 1856 28 100.0 32 ............................ ATGCGGACGTTTTCCGGGCTGGACGACGCCCT 1796 28 100.0 32 ............................ TTGGCCGCCGTGTTGACCGCATGCCGGAAGAT 1736 28 100.0 33 ............................ GCCCTCGGGCGTTACTGCCAGCAGGTCCCTGAT 1675 28 100.0 32 ............................ ATTTCGCAGGACATCAATTCCCTGGTGTCCCG 1615 28 100.0 32 ............................ TTCCAGTTCGTACTTGACGGATGGCGCGCCGG 1555 28 100.0 32 ............................ ATTTCGCGGCCGGCCACGCTTGCCCGTCACCA 1495 28 100.0 32 ............................ GTGGCAAACCTGGGCACCGACGCCGCCTGCGT 1435 28 100.0 32 ............................ TGTACGCGCGCGCCTGCGTGCTGTCGCCACTG 1375 28 100.0 32 ............................ TCCACCAGGCGTTCCAGGCCAGCCACGGCCAG 1315 28 100.0 32 ............................ AGTCTGCCGAATTTGTGCTTGTCGCGGTGGAT 1255 28 100.0 32 ............................ ATTCACCGTCAAGCGCACCCCCGCACACCTGC 1195 28 100.0 32 ............................ TGATGGCGTGGGCTAGTTCGGCGGCACGGTGC 1135 28 100.0 32 ............................ ATGAATGCCTACACGCCGCGTTAAGTCTTGCA 1075 28 100.0 32 ............................ GCTGATTGGCGCCGAGGCCAGCAATCTGCCCA 1015 28 100.0 32 ............................ ACACAATGCATGGCGAGGCGGCAAATGGCCAA 955 28 100.0 32 ............................ GCTGATTGGCGCCGAGGCCAGCAATCTGCCCA 895 28 100.0 32 ............................ ACACAATGCATGGCGAGGCGGCAAATGGCCAA 835 28 100.0 32 ............................ GTGAAGCAGAGAAAGAACAAGCTAAGTTACTA 775 28 100.0 32 ............................ ACGTCAACACGTTGTCGATGCCGCCCTTGCCG 715 28 100.0 31 ............................ TTCACGCATCACCCCTAGGCCGCGGCCGGGC 656 28 100.0 32 ............................ ACGGATCGCCGCCGCCGCGAGGTCCAGCAGTT 596 28 100.0 32 ............................ ATGACGGCACGGTGAAGCAGGTGCGATTCCGG 536 28 100.0 32 ............................ ATCTCCGCCCTGACCGCCCTGGCCACGGCCTC 476 28 100.0 32 ............................ TCCTCGCCATTCTATACCAGCGAGACGGGACG 416 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 65 28 99.9 32 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : | # Right flank : AACTAGAGCATTTTAATATTGAAAAAGTTTAGCAATAGTACTATGCCCATGGCATGGGCATAGCAACAAAAGAAGTTCGAGAATTGGCGGTAAAGGCATACTTATCAGGCAAAGGGACGCTGGAAACCGTGTCCAGGATGTTTGAATGTCACACGAGCACGCTCAAACGCTGGCTCCGAGAATATAAAGAGGAGAACAGGCTTGAGCCGCGCCGCAGAGGGCACATGGCCGCGGCCTTCTCTCCCCAGGAGCGAGAACAGCTTGTTGCGTTTCTGGAGGAACATCCAGACGTTACCCTTGAGCAAGTCCGCGAACGATTTGCAAAAACATGCTCGCTTGTCACCGTGCACAATACCATCCGAGCGCTCGGGTTCAGCTATAAAAAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //