Array 1 338158-339317 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAENBO010000001.1 Streptococcus pacificus strain CSL7591 NODE_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    338158	    36	 100.0	    30	....................................	AATTGCTCGTGCAATCCTTATTGGTGATGG	
    338224	    36	 100.0	    30	....................................	ACACGTAGTCGGTCAGATTGTCTTCGCCTA	
    338290	    36	 100.0	    30	....................................	CTAGGCTAGATTTTGAGAAAATGCGAGAAG	
    338356	    36	 100.0	    30	....................................	AACGCTATCGACTTACTAGATAGCGCCAAG	
    338422	    36	 100.0	    30	....................................	TTGATAAGTCTGCTTGTTTTAGATCATCAA	
    338488	    36	 100.0	    29	....................................	TAGAAGAGAGTTTGAAGTATCTGCTAGTG 	
    338553	    36	 100.0	    30	....................................	CTGGAACGAATTCTCCATCTCTTTGATCTA	
    338619	    36	 100.0	    30	....................................	CTGAAATCACATTTCCTGTAGTTGAAATTG	
    338685	    36	 100.0	    30	....................................	TGGATAACTACCATTACGGACGACACTGAC	
    338751	    36	 100.0	    30	....................................	TCAAATCGTAAAAGATGGACAGAAATATGT	
    338817	    36	 100.0	    30	....................................	TGCTGGATTATGACCAAAAAGGAATTCGTA	
    338883	    36	 100.0	    30	....................................	TAATTAAGTTATCTTTATTTTGATGAATTT	
    338949	    36	 100.0	    30	....................................	AGATTACCTTTTTCAAGTTTTGTATACGAA	
    339015	    36	 100.0	    30	....................................	ATCACATTTGAAAGGAGAAAGCATGCCTAA	
    339081	    36	 100.0	    30	....................................	CAGAACACATTAAGAGCATTACGCTTGAGG	
    339147	    36	 100.0	    29	....................................	CAGAATAGTCAAGCGGCAACGACAGCAGA 	
    339212	    36	 100.0	    30	....................................	TTTCAAGGAAGTCATTAAAAGCTATTTCAA	
    339278	    36	  86.1	     0	........G..............C.....C....CA	|                             	A,C,CT [339299,339304,339306]
==========	======	======	======	====================================	==============================	==================
        18	    36	  99.2	    30	GTTTTTGTACTCTCAAGATTTAAGTAATTGTAAAAC	                              	       

# Left flank :   GGGTAGATTCTAAAGTATCTTTTAGAAATTATCAAGAAATTTGTCAACAAATAAAAAGAATGTGTCAAAAATTCCCATATTTTAAAGTGATATTATTTCCTAGTAGTAGTGCTTATACCGATATGGATCCCAAATATTTAGAGTCGGTTGTTGTGGTTGCCGATGCGATTGAAAATTTTTTTGAAGCAGACTTTATGTATGAACGATATAAAAGAAACTATCCTACTAATTATCCCATGTCACAAAATGAATTTTTACATTCTTTAGCAAGAATTGGTGATAACTTGTTTTCTTCTAAGGAAATAATTGAGTCAATGGCTTTTCAAGATCTAATATCTTTGAAGATAATCAATCAGCTTTATCATTATTCAACACCTAAAATAAATCAAATGATGCCGTCAAAGATGGAATTAGCATATTTATTTTCTTAAAATTGACAGTTTAGAAGAAACTTTTTATAATAGGGTTGAGAGGAAAAACTAAATAAGACGTTATTTGAG
# Right flank :  AATAATAAAAACAGCAGGACTTTCCTCCTGTTTTTTTCATCCTTTAATAGTTTCCATATTCATAAAAAATGATTTTTGAAATGATAAAGAGCGACTACCAACTCCCCCAACAAGTCAAAGTCTTGTTTTTTCCTATACTAATAGTGTATAATAGCATAAAGGAGGATTAGACATGGAGTTACACTCACATCTTGAGAGAAATTTGGATGATGCTTATGATCATGTGATTGCGCATTTGAAAGAGAAAAAAGTACGTATCACTGAATCACGCAAAGCCATTATTTCTTATATGATTCAGTCCCTAGATCATCCTAGTGCTGAAATGATTTACCGTGATCTAAAGCCTAAATTCCCTAATCTAAGTCTAGCGACTGTTTATAACAATATTAGATTTTTGGTCGAAGAAGGATTTGTTTCAGAAATTAAACCAAGTAATGACAATACGACCTATTTTGATTTCATGGGACATAAACACCTTAACGTTGTCTGTGAACAGTGTG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAATTGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTAAAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.37   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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