Array 1 2943479-2940327 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021782.1 Acinetobacter baumannii strain A85 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2943478 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 2943418 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 2943358 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 2943298 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 2943238 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 2943178 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 2943118 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 2943058 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 2942998 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 2942938 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 2942878 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 2942818 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 2942758 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 2942698 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 2942638 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 2942578 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 2942518 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 2942458 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 2942398 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 2942338 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 2942278 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 2942218 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 2942158 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 2942098 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 2942038 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 2941978 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 2941918 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 2941858 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 2941798 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 2941738 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 2941678 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 2941618 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 2941558 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 2941498 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 2941438 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 2941378 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 2941317 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 2941257 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 2941197 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 2941137 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 2941077 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 2941017 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 2940957 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 2940897 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 2940836 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 2940776 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 2940716 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 2940656 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 2940596 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 2940536 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 2940476 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 2940416 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 2940356 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //