Array 1 67759-71198 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDOI01000154.1 Capnocytophaga canis strain CcD38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 67759 47 97.9 30 .............G................................. AGAGAAAAGGCATTATTAGAAAATTGGGGA 67836 47 97.9 30 .............G................................. AAATGAAAAAGTTATTTATATCGTATTCAA 67913 47 97.9 30 .............G................................. GCAAAAAAACTTGACTTGTATTGCAGAAAG 67990 47 100.0 30 ............................................... TCACAAATATATACGCTCTAAAAATACTTT 68067 47 100.0 30 ............................................... AATAAAGAATACAAAGGAAGCACGATAAAC 68144 47 100.0 30 ............................................... AAAGAGCCATGTTAGTATATAATAAAGAGG 68221 47 100.0 30 ............................................... TTTAGTCAATTCGGGGGCAAATTCTGACTT 68298 47 100.0 30 ............................................... ACTCTCTATACAAGCACGAGACCAAAACAG 68375 47 100.0 30 ............................................... AACAAAAAAATAACATAGATAAAGAAAAAA 68452 47 100.0 30 ............................................... TACACCCCAAGTCATTTAATATTTAATTTA 68529 47 100.0 30 ............................................... TGTTCGTACTTCATTTGTTTTGGAGCCTCT 68606 47 100.0 30 ............................................... AAGATGTGTACCTCACACCACTGGCAGAGG 68683 47 100.0 30 ............................................... ACAAACCCCAGTGGCTCATTGATTTGGAAA 68760 47 100.0 30 ............................................... TCATAGAAAAGTTGTCTGCTGACAAGGTTT 68837 47 100.0 30 ............................................... AGGCTAAAGTTTCGAAAGCAATAGGTGTTG 68914 47 100.0 30 ............................................... ACAAGTGGAAGTGGCTTGTCTCAATACCGT 68991 47 100.0 30 ............................................... GAGGCACTAACTCGGAAAGTAATCATCTAA 69068 47 100.0 30 ............................................... AAGTAACAAATAGCAATGAACAACGAGCAA 69145 47 100.0 30 ............................................... ACAACGATAACATCGCACTGAATAATTTAT 69222 47 100.0 30 ............................................... CTAAGAAGCTATCGGATTTGATTACTGCCA 69299 47 100.0 30 ............................................... GCCTATCCGACTGCCCAATGGTCTCCACGC 69376 47 100.0 30 ............................................... TCAAAACAGGTTTTTTACCTAATGCCGTAA 69453 47 100.0 30 ............................................... ACGATAATGGTTCAGGGAAAGATTCATTTT 69530 47 97.9 30 ........................G...................... CCGACTTTTGCGGTTTGTACGCCTGTGCTA 69607 47 95.7 30 ........C...............G...................... AATGTTTTTAAGGTTCGGCAACTCTTCAAC 69684 47 95.7 30 ........C...............G...................... AGCGTTGGAACAGAGCCAAAGATTTTTTTG 69761 47 95.7 30 ........C...............G...................... TTATAGAAGTTGCTGAAACAAAAAGAATGA 69838 47 95.7 30 ........C...............G...................... TACATTTGTACTTGTCCGTCCGCTTTCATT 69915 47 95.7 30 ........C...............G...................... TCAGGACTTGACATTGAACAAGCGAAGAGA 69992 47 95.7 30 ........C...............G...................... CATGTAACTGATATAACTGCTCATTACGGT 70069 47 95.7 30 ........C...............G...................... GGATAGAAACTCCAGCCGTTCCTGTCGCTC 70146 47 95.7 30 ........C...............G...................... ATAGGAGTTAGTAACCAACAAATAACAAAT 70223 47 95.7 30 ........C...............G...................... TAAACGTAACTAATTTTAAAAATACATTCA 70300 47 95.7 30 ........C...............G...................... ATGTCCCTTTTTAATAATTAACAATTAATA 70377 47 95.7 30 ........C...............G...................... TTACTTCCCGATGCTATCGCTACGTTTATT 70454 47 95.7 30 ........C...............G...................... CATTGAGCAGATGAGTAGACAATAAACACA 70531 47 95.7 30 ........C...............G...................... AGCCGAAGTTTCTTTAATAGTTCTTCCAAT 70608 47 95.7 30 ........C...............G...................... TCTAAACAAATCGGATTTTGTCTATCATTT 70685 47 95.7 30 ........C...............G...................... AATACCATTCCCGTAAATAATTCGGCTCGT 70762 47 95.7 30 ........C...............G...................... GGATATTAAAATGAACACAGAAAGAAAAAA 70839 47 93.6 30 ........C...............G.................G.... TTTGAGCGATTATGGATAGGTTCTCTGACA 70916 47 95.7 30 ........................G.................G.... GCCGAGCTAAATGCATTGTAAGCTGAATGC 70993 47 95.7 30 ........................G.................G.... TGCTCTTTATGCCATTTTGAAAGGTTTTTT 71070 47 95.7 30 ........................G.................G.... GATTTCTCGCATGTTATCCATGTTGATATT 71147 47 76.6 0 .......................AG.CG...T.....TC...GT.CG | T,TCCC [71181,71183] ========== ====== ====== ====== =============================================== ============================== ================== 45 47 97.3 30 GTTGTAACTAATCACAAAGTTACGAAAAATTGAAAGCAATTTACAAC # Left flank : ACAAATGCTATACGGGCGAAAAAAGACAAATTTCTTATCCTAAAATGTTATGAATTCCGAACGATTTAACGCTTATAGAATTATGTGGGTAATGGTTTTATACGATTTGCCAACCGAGACCAAGGCAATGCAAAAAGCAGCCAATCTCTTCCGAAAACGCTTGGAAGATGATGGATTTTCTTTATTTCAGTTTTCTATCTATTTGAGGCACTGTCCGAGTAGAGAAAATGCAGAAGTGCATAAAAAACGAGTAAAAATGATGCTTCCCAAATACGGGAAAGTAGCCGTAATGACGATTACAGATAAGCAGTTTGGTGATATGGAAATATTTCATTCTAAAGTACGCGAAGATCCACCACCTACTTATCAGCAGCTCGAGTTATTTTAGAAATAGAATGAAAAAAATGGATTTACTCAGCCCGATTTATTCTTTTTTTGCTCAATTTTTTATTTCTAAAAACAAAAATAATCCTCTGTCTGTCAGAGGATTATTTTTTGAG # Right flank : GACTTCAAATAATGAAGGTTTAAAGTATCCATTACAAAAGATTTCAAGCAGTAAATTATGTCCTCGTCCTTTTTCTGACGTAAGATGTCGAGAAAGATGATAAAAACCATCCTCTTGCTTTTCGTATTTGATTTTTTTAGCCAAAATCCTGAACGTGTTATGTATAGCCAATCTTGAAATTGGAAAGGTGCATAGCGACAATCCCAATCAGGAGGATAACCTTGAAGTAATGTTCTGTACTCTATGCTGGAAAGACGAAAGTCGATGCATTCTTCTGCTTCCCAATGCACACTATCGGGATTTGGGTATTGGACTCCGTAGATAATTATATTATCTTGCTTATTCATTTTATAAAGAGTTAAGATTTTTATTTTCAACGTGTTAACTTTCGTGTTTTGGAATTTAGAATTAAGGTTTTGTTCGTTTGCTATTGAACTTTAGAGAACTTGTTTGTGTAAATTTAGTTGAGCATCAAATGTTTTTATAGAAAGGAATTTACA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCACAAAGTTACGAAAAATTGAAAGCAATTTACAAC # Alternate repeat : GTTGTAACCAATCACAAAGTTACGGAAAATTGAAAGCAATTTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //