Array 1 62594-59177 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNEC010000004.1 Bacteroides ovatus strain 1001254J_160919_H11 NODE_4_length_241134_cov_28.5295, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 62593 45 87.2 30 ...A.-...CA....T..-............................ CTTGCCGAAGTCGGAGATACCGTCCAAGCA A [62584] 62517 47 97.9 30 .........................G..................... TATAAAATTCAGCGTGCCAAACAGCACGAT 62440 47 100.0 30 ............................................... GCGGATGCAGGGCTGCCACGCAACTGTTTA 62363 47 100.0 30 ............................................... AAAATCTATATAAGCCGTGTACTCGTCCGT 62286 47 100.0 30 ............................................... CCGGCAGACTACGAAGACCGCACAGAACAA 62209 47 100.0 29 ............................................... TGAATATAAGGGGGATGTAATACCGGCTA 62133 47 100.0 29 ............................................... TGAATATAAGGGGGATGTAATACCGGCTA 62057 47 100.0 29 ............................................... TGAATATAAGGGGGATGTAATACCGGCTA 61981 47 100.0 30 ............................................... CATTTGTTGCAAGGAACGATAAGAAACATA 61904 47 100.0 30 ............................................... ATGAAATTGGGGTCATAACACATAGAGGTA 61827 47 100.0 29 ............................................... AAGGATGGGAAAGCTGAAAGACTTCAAGA 61751 47 100.0 29 ............................................... GCCAACCACACGGATATGATACAGATATT 61675 47 100.0 29 ............................................... GCGATCCGTCAACGTACCGTAGAATGAAA 61599 47 100.0 30 ............................................... CAGGTGAAAATCAAGGCGCAATTAGAGTAT 61522 47 100.0 30 ............................................... ATTAGATTTGCAGCATGAGAGTAGACGACC 61445 47 100.0 30 ............................................... TAGCCATGCGGCGGGCGGCGTAACGTTCAC 61368 47 100.0 30 ............................................... CCCGCCGGAGAGAAATGTATTCTTCCGTTA 61291 47 100.0 30 ............................................... AATGATGTGGTATTCCACCCTGTGTTTGTA 61214 47 100.0 30 ............................................... GCCAACGTGTTTCACCTTCCGAGCACTCGC 61137 47 100.0 30 ............................................... TGTCTTCGCCTTATCAAGTTGCTCAGCCAA 61060 47 100.0 29 ............................................... TATGCAAAGATTATGATGGTAAACATGAA 60984 47 100.0 30 ............................................... TGTCCGGTTAAAGCGCAATGCAGGGCGCAA 60907 47 100.0 30 ............................................... GGGCGAGCTTTCAGGACCGCAACGCCTTAA 60830 47 100.0 29 ............................................... GAGGTTTTGAACGCCCGGAAGATCATAAA 60754 47 100.0 29 ............................................... CCGGGCAATTACTAAAAGTATCAAAAGCC 60678 47 100.0 30 ............................................... TGTTCTTGTTGGCGCAAACTTCGATCGGGA 60601 47 100.0 29 ............................................... CCTGTAGAAGATGAACCGGAAGCACCTGT 60525 47 100.0 30 ............................................... GGATTTCTCATACACGAACGAGTTAGGATA 60448 47 100.0 29 ............................................... TCCAGTAAACGCCCGAAAATCACTTTAAA 60372 47 100.0 29 ............................................... TCCAGTAAACGCCCGAAAATCACTTTAAA 60296 47 100.0 29 ............................................... TCCAGTAAACGCCCGAAAATCACTTTAAA 60220 47 100.0 30 ............................................... AAAATTCGCTATCATGTTAAACGACCCGGA 60143 47 100.0 29 ............................................... AATAGCAACAAAAGCAATAAGGCGAATGC 60067 47 100.0 29 ............................................... ACCGGGAAAGTACTATGCTCAAAAGGAAT 59991 47 100.0 29 ............................................... TAAAGCCTATTTATCCGAAGCGCAGGCCT 59915 47 100.0 30 ............................................... CCACCGTACTTTGAGATGGGAAAACATAGA 59838 47 100.0 30 ............................................... GAAGAATGTATTGTAATCATCCTCGTTGTT 59761 47 100.0 30 ............................................... AGCGCCAGCCAAAGAACCAATAGCGCCGAT 59684 47 100.0 30 ............................................... CATATAGCATTTGTGCAGCACGACCAATTT 59607 47 100.0 30 ............................................... TATAGATGATTCAAGAACGTTAGTATCGGA 59530 47 100.0 30 ............................................... GTAAAAAGACTTATGGCTATCGTTTGGATA 59453 47 100.0 30 ............................................... CATACCTTGCAAATTTTCGTAATCTGTCAA 59376 47 100.0 29 ............................................... CCTGAATATAAACGTCCGGCATATCAATA 59300 47 100.0 30 ............................................... GTTTTTCACCGCAGACATTACAGAGGTATG 59223 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 45 47 99.7 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Left flank : GTTCACAAGTTACATAGGTGGGGATTCCATAGTTGGCGATCTCCTGCATAGCAGCCGCACGTTCTTGAGGTACCAGAGTATTCCGCATTATATCCGGATAAAAACGGTTCGTCTCAATGGTCGTACAAAGAACGGATTTCTTCATAACCGGATGCTCCAGATATTTCAGAAAACGGGCGGGATTCTTTGACTGGAAGAGATACTTGTTATCAAAACCGTCACAATAGTCCAGTATCTGCTCAATCCATTCTGACGGGACATTAGCCGCCCATTCATCCGTACTGCTGCCTACAAAGATAAAGTTGCCTTCACCCAGATTCACTTTCAGTTCCTTCAGCTCCAGACGCAAGGGAGGCAGGAGAAGTTTACGTCTCATAAAACAATATGAACAAGAGTGTTCACATTCGCCTTTCATCGGGTTATATGTATGTGAAACGAAGGCATACATGTTCCCGGTACTTTTATTCAGTGCCATATATCATTATGCTTTTCACATCCAT # Right flank : ATATTTTATATAACAAAATGATTTCCAACAAGTTAAAAAGAAAATTAGAAAAGAAAAAAAGTCTGTTTCCAGCACAAAATCTCGCATTAATGCGAGATTTTGTTTTTTAAAATAACTCTAATTGTTGTCCAGGCGTATTAACATTCTGCATTTTCTTTCCATAAAAAAGTTCTATATTACCAAACTGTTTATCGGTAATACACATGATTCCGACATGTCCAAACTCCGGGAGGAAAGATTTAACTCTTTTTATATGTACTGTAGCATTTTCACTACTAGCACAGTGACGCACATAAATGGAAAATTGAAACATAGTAAAACCATCCTTTTGCAGATTCTTTCTAAAGTCCGCATAAGCCTTCTTTTCTTTCTTCGTCTCAGTCGGCAAATCAAAAAAAACAAGTACCCACATAATACGATATTCACTAAAGCGATCCATTATCGTTCAGGATAAGCTATTCGACGAATTTCTCCATTGAAACATTTGTAAAGTGAGGAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //