Array 1 1838970-1841436 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABXPD010000001.1 Klebsiella pneumoniae strain RHBSTW-00884 RHBSTW-00884_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1838970 29 100.0 32 ............................. CATTTCATAGTGATTCGACTATTTAATTAACA 1839031 29 100.0 32 ............................. AGTTCACGACAGGCAAAGTCTTTACGGTATGC 1839092 29 100.0 32 ............................. TCTGCTGGTTACAGGAGAAAAAAATGATTGGT 1839153 29 100.0 32 ............................. CGTGAGCATCTGGGCATCTTCAGTGATAGCGT 1839214 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 1839275 29 100.0 32 ............................. CACAGATGTATAGCCAAGCGTTTTGCGCCAAA 1839336 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 1839397 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 1839458 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 1839519 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 1839580 29 100.0 32 ............................. CTTCCCGCGCATATTCATTGCCGTCAGCCAGC 1839641 29 100.0 32 ............................. CCTGAATTGGGTGGACACCACAGCAGTTGGGA 1839702 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 1839763 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 1839824 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 1839885 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 1839946 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 1840007 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 1840068 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 1840129 29 100.0 32 ............................. CTGGATAGACTGTTGCTTCACGCCAGCTTTGG 1840190 29 100.0 32 ............................. GTTTACTCACCAGTTCGTCGAGGTGGTAGGAA 1840251 29 100.0 32 ............................. TTGTCATCGTTCGACAGCACAATGGCTTTGAG 1840312 29 100.0 32 ............................. CTTTCTATTCCACGGCCCGGTCCCCGGGCCAT 1840373 29 100.0 32 ............................. CGATAGCCTGGCGGTTTAACCATGAAAGAATG 1840434 29 100.0 32 ............................. CAAACGCAGATGAAAATTCATGGGTCGAATAC 1840495 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 1840556 29 100.0 32 ............................. GTCGACAGGGGATTCTGGAGCGAAGAAAACAC 1840617 29 100.0 32 ............................. AGGTCCTGGATGCTGGAGTTATCGGTGTCCAT 1840678 29 100.0 32 ............................. GTGCCGAAGGAGCCGACAGCGCAGATGTATGA 1840739 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 1840800 29 96.6 33 ........T.................... CCCACAAAGAGATTTTGGAGCAACGTGGTCAGC 1840862 29 100.0 32 ............................. CGACCTTATGATTCGTGTTTCGTGAGGGACTT 1840923 29 100.0 32 ............................. AGGGCTGGTCCGACTCCCAACTGGCGAGAATG 1840984 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 1841045 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 1841106 29 100.0 32 ............................. GTGCTGGCCTTGAGCTTTTCAGCAATACGTCC 1841167 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 1841228 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 1841289 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 1841350 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1841408 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //