Array 1 438797-437550 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKJZ01000003.1 Streptomyces griseus subsp. griseus strain 48 NODE_3_length_884337_cov_10.9658, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 438796 29 100.0 32 ............................. ACTACGCCCGCAGCCCGTACCCGATCAAGCCG 438735 29 100.0 32 ............................. CACGCACACACGGAGGCCCGCCATGGGTGACA 438674 29 96.6 32 ............................T CCTCGCCGGAATCCTCCTCGGCCTCTCCCAAG 438613 29 100.0 32 ............................. ACCCCCTGACCCCCGGGCTGCCCTGTCGCCCC 438552 29 96.6 32 ............................T TCGGCGGGGGTGTTGATCGGGGGCCCGTGCAT 438491 29 100.0 32 ............................. ATGCCCCAAGCGCCTATGTGCCGGGTCTACGA 438430 29 96.6 32 ............................T CCGCGGCGCTCGTACGGCATCCACTCGGCCCG 438369 29 100.0 32 ............................. TCGGCCTGTGTCAGGCGCCCATGTTTCTGCCA 438308 29 100.0 32 ............................. GTCCACTCGGGCTCGACGCCTTGTTCGTCGAG 438247 29 100.0 32 ............................. CGGCCGGACACGTACTGCCAGATCTCCGGGGA 438186 29 96.6 32 ............................G ATCATCGGCTGGACTACAGCCGCTTGGGACTG 438125 29 100.0 32 ............................. TGGACGCTCAGCAGGGGGGACATCGGCGTGAG 438064 29 100.0 31 ............................. AGGCCCTTGTGGGCCTCTTGTTTCGTGATCC 438004 29 100.0 32 ............................. CTGCGGCAGATCGCGGGCTCGTGGACCGTCCC 437943 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 437882 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 437821 29 100.0 32 ............................. TTCTCCGGCGCCGACCAGGCCCGCACCGTCAT 437760 29 100.0 29 ............................. GGGGGCAGCCTGTTCCCGTACGCCGACGC 437702 29 86.2 33 ..C..G...C..............A.... CCGAGGACGGACGCGCGGGACTTGGTGCGGCCG T [437695] 437639 29 93.1 32 .............A.......G....... AGGTCCCGGCCGCAGTAGTCCTCGACGAGCCC 437578 29 93.1 0 ...........................TG | ========== ====== ====== ====== ============================= ================================= ================== 21 29 98.0 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GTCATCGTCCTCACCAATTGCCCGCTGGGCCTGAGGGGTTTCCTCACCCGCTGGCTGCTGGAGATCTCCCCGGGCGTCTTCCTCGGAGCCCCGTCCACCCGCATCCGTGACCTTCTGTGGACCGAGGTACGCACGTACGCCGGCCAGGGCCGTGCCCTGCTCGCCTACCAGACGGACAGCGAGCAGGGCTACGCCTTCGAAACCCACGACCACACCTGGCACCCGACCGACCACGAAGGCCTGACACTCATCCACCGCCCGACCGCCCGCGTCCCACGCGCGGAAAGCCCGGGGAGCCCGGGGAGCCCGACGGTCGATGTACCCCGCCAGGGCTGGAGCAAGGCGTCGAAGCGACGGCGGTTCGGGGGCGGGAGGTAGCCGGGGGTGCGAGGGCAGGGATGGACCGATGTCCGATAGAGGACACAAGGACGGATATGCCGGAATTCGGAGAAGTGAGTAAAAACAGGACTCCGTGTACATAGAACACCAGGTCAGCGAGT # Right flank : CCGCAGACGGTCAGGCCCGTGTGCGTGCTCTCCGTCTCCTCAGGTGCGAGGTCGCTCTCTGGTCGGGCGGCTCCCGCTCTCCCGCTGGACGCCCAGGGGGCTCACGGCGGGAAGCCTGCGCCGGTCGTCGCCCTGCCTTCGATCGCGGTCGCCGCCGCCCGTCGCGCTGCGGTCGGCGTACGGCGGAACGGCAGAGCGCCCGGCCGCCGTACAGAGAAGGTACGGCGGCCGGGCGCTCCGGTTCACGGTTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACAGGGCCTGCTGGTCCTCCGCCGCGGTCAGGGGGGATCGCGCGGCGGTGACCCCACAGAGAGGCCCTGTTCCGGGCCCTCCGGGTCCTGCCTGGTCCCGTTGGGCTCGCTCTCCATCCTGCCGGGCGGCGGGAGCCGTGTGGTCGGGCGAAAGGCCTCGATGGTGGGGACGTAGGTCCCTAAAAGACGCATCAGTGATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 449846-448779 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKJZ01000003.1 Streptomyces griseus subsp. griseus strain 48 NODE_3_length_884337_cov_10.9658, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 449845 29 100.0 32 ............................. GTCACCGCCGTCGACATGAGCGACGACCTGAC 449784 29 100.0 32 ............................. CACCGGTTGGACCGACAGCGCCGGCCGCGCCT 449723 29 100.0 36 ............................. ACCGGGCAGGACGTCCTGACCCGGGTGCGCGCCGAC 449658 29 100.0 32 ............................. ATCGCCGAGGCCGACACCTACGGGCCCGCCAC 449597 29 96.6 32 ............................G TGCTTGAGCAGCCCGAGCAACGTTGTCGCCGA 449536 29 96.6 32 ...........C................. TCGGGCGGGCGGAGCGGGCGCGCAGCACCCGG 449475 29 100.0 32 ............................. CGCGACCTGAACCGCATCCTCGGATGGCCCGA 449414 29 100.0 32 ............................. TCTCGCCCCGCCCCGCCGGGCCCCGACCGCAT 449353 29 100.0 32 ............................. GGGCGGGGACTGCGTATGGCGGGCCCCCTCCA 449292 29 100.0 30 ............................. GGCGCGCAGTCCCATGGCCGCGCCCCTCTA 449233 29 100.0 32 ............................. GCGACACCGCCCCTGACCACTGGAACAACACC 449172 29 96.6 32 ..............C.............. CCGCCGCCGGTGAGCCAGCCGAGGGGGATCTC 449111 29 100.0 32 ............................. CGCCGACCGACTGCTCAAGGCCCTGCGCGACG 449050 29 100.0 32 ............................. TCGGCGTGACCGGACCTCAGATGATGGGGGCC 448989 29 100.0 32 ............................. TGACGCTGACGCAACGAGCCCAGCAGCGCCCA 448928 29 100.0 32 ............................. AACACCCTGTTGTAAGAGGTTGATGTGAGCGA 448867 29 100.0 32 ............................. GACGACGAGAGGTCGTGGTCGTAGGCGAGCAT 448806 28 93.1 0 .....................C.-..... | ========== ====== ====== ====== ============================= ==================================== ================== 18 29 99.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CCCCGCGCCTTCCTCCATCACCGCCTCACCCACAAAATCCCACCCCGGCTCACCACCGACCATGCACAACCCCCCGCCCCCACCCGCCGCATCCTCATGGAATGCACCGACTGCGGACGCCCCGGCCCACCGGAAGCCCTCCCCGACGGCCTCTGTCACCCCTGCCGCACAACCCACACCGCAGACCCCGAAAACACACCCCACCCCGCCGACATCGCCGACATCAGGGCCCACATGAGCAACCTCCGCAGCCTCCTCAAACCCGTCTGAGCTCAACAACCCGCCTGCCTCACAGCCCCGGCACGGACAGGCCTCAGCGAGGTGCACCGACGTCCTCCTTCAAGAGGCCGCCTCTCGCCGCCTTGGAAGGGCAGAATCACTCCCGACACGCTTAAAGCTTCGAGCAGGCCTATGCACACCAACCAGAGGGCGATATGTCCATTTCTCGGGAAGTTGTCAAAAAGCACCACGCGCCTGAGTAAACCCGCAGGTCACGGACT # Right flank : ATCCGGTCGACGGGGTAGAAAGACGCCCCCCTTTGCATGGGCCCGACGCGCAGGGGCGCTCCCCCACAGCACACTCGATCAAATACGCGCACTTGTATTCACTCTCGGTCATCGCGACCGTGCGGGACGTCGACGATGTCCAATACGCCCATGAGCCGCGATCATCCGGAAAGCCTTTCGGCATACGCCCGCCTGTCCCCCGTATCCCGCACCGCCTGGGGCAAGCACGATCGGCAGACCGAGCAGTGGCTCCCCCTCTGGCGGCACATGGCGGACAGCGCCGCTGTCGCGGAGCGGCTCTGGGACCAATGGGTGCCCGACAACGTCAAGGCGCTCATCGCGGACGCGTTCCCGCAAGGCGCTCAGGACGCCCGGCGAGTGGCCGTCTTCCTCGCCTGCGTCCATGACATCGGAAAGGCCACACCCGCCTTCGCCTGCCAGGTGGACGGGCTCGCCGACCGGATGCGGGCAGCCGGGCTCTCCATGCCGTATCTGAAGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 454056-452989 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKJZ01000003.1 Streptomyces griseus subsp. griseus strain 48 NODE_3_length_884337_cov_10.9658, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 454055 29 100.0 32 ............................. CCGTTGGCTGACCAGCACGGTTCGCGCGCGAT 453994 29 100.0 32 ............................. ATCAGCGGCCCTGGAGGGTCTTGGCCACGCGG 453933 29 100.0 32 ............................. ATTGCTACAACCCCCCAGAGTTGAACATGCGC 453872 29 100.0 32 ............................. AGATCGGGACCGTTGGCCGTGGGCACGTTCTC 453811 29 100.0 32 ............................. GTCGCCGAAGCAGTTCGCATCATTCGACCGGA 453750 29 100.0 32 ............................. CGCCAGCGACAAGTTGATGTCCCGCTCTGCAA 453689 29 100.0 32 ............................. CTTACGTCACTTGCATGCCGCGCGGGAGGATT 453628 29 100.0 32 ............................. CAGAGGCACGGTGATGGCAGCGTGGGTGGAGG 453567 29 100.0 32 ............................. TGCACTCCGTCCGCGACGCCCACGGCCGGGTC 453506 29 100.0 32 ............................. GACTGCGGCTCCGTGACCATCGGCACGACGAC 453445 29 100.0 32 ............................. GATGTCGGCGACGGCATCCGGTCCGTGGCGTC 453384 29 100.0 32 ............................. CACTGCGACGCCAGCTCACTCGATGACCCGAT 453323 29 100.0 32 ............................. GGACCGCCGTCGGTGATCACGGCCGCCACCAG 453262 29 100.0 32 ............................. GCGGCAGCTACCAGTTCCGTGGCGTCGACTCT 453201 29 100.0 32 ............................. CGGCAGGGCCCCAGGAATTCGACAATCGCCAG 453140 29 96.6 32 ........................C.... GGAGCCGCGAGACGGCCGGCCGCACCCACCGC 453079 29 100.0 32 ............................. GAGCACGACCGTTCTGCGCTGTCGTGAGTCTC 453018 28 82.8 0 ..................TTC...C-... | G,C [452991,452998] ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : TACAGAAACCCCCTTGATCCGCGGAGACGCGATCAAGGGGGTTTCTGCGTTGGGTACCTGCTCCATGGCCCGAAGGCCATGGCTGACTAGCGGCCCTGCCCATGGCGGGACCATGCGCACGTGCGGCGTCCGCGTACGCGCCTGCGGACGAGACCACCGCAAGGAAGTCCGCCGTATCGGACGCGCTCACGAACCACCTGTCACGCCCCCTCTCTCGGCTGACCGTCATTTCCCCAACCGAGATCGCCGCCGCCGACGCGTCGAAGCCGCTGAGATGCGAGCCTGGACGGCCACCAAGCGTCCTGGCCGCGCTCGCGGTTGCCACGGTGACCACCACTCTCTTTTCAGGAGGCTGCTCTTATGGACTGAAGAGAGGCAGAATGACTGCTGCCGCACAGCGCTCTGCGAGTACGATCACCTTCGAGGTGGGCGATATGTCTCTTTCTGAAGAAGTAAGTAAATTCAGCTCCGTCACCTCATAAAACCGCAGGTCACGAAGT # Right flank : GTGATCGTTGCGTAGACGCGCGGGGTCCACCTCAAGAGCGTCCGCGACCGCTTTGAGCACCTCGTCGCTGGACCGTCGGACACCTCGCTCGATGGCACGAACCATGGCATAGGAAACGTGGGGGGCGCCGCGAGTTCGGTTTGTGTGAGCCGGCGACAGGCGGCGATTCGCCTGCCGATTTCCTGCGGACTACCGAAAGACACCCGCTGACCGTACGCACACGAAGAGTTTCCGGCGGTAGATTCCTCTACTTCTGTGCGATCTCGATGAGTTACGTCAGTGACTGGATCACCCAGTCGGCAGTTGCGTGCACTTGGTGGTCACCGCCCCATAGTGCCCCCATGGGCCGCGGCGGATAGGGGCCATGCGCAGCCCGGCCTGGCGGCGGGGAATGCGTCGTTCACCGGGTGATCACCGACGTACACGGTTCCTCCCGCCGGAGCACCGGACGTGTCGAGGATCCGTTCGAAGAACTGCGCCGACGGTTTGGCACAGTCCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //