Array 1 11676-9200 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWSZ01000028.1 Streptobacillus moniliformis strain CIP 81-99 contig_46, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11675 36 100.0 30 .................................... TACCAACATTTTAAACAATAGGATGATAAG 11609 36 100.0 30 .................................... TTCTAGAAAATGGAGGGCTAAAAGAAGATG 11543 36 100.0 30 .................................... AGCACCTTTTATAACTCAATCGCAAGGCAT 11477 36 100.0 30 .................................... AAATGGCCCTAAATGGAACGTTTGTACAAA 11411 36 100.0 30 .................................... CGACGCGAGGTTGCAGCTTCCAGAATATTT 11345 36 100.0 30 .................................... GGCTCCGACAGAAAAAAATGGAATGGGTGT 11279 36 100.0 30 .................................... TTTTGTAAACAACTTATTGCATGAATTTAA 11213 36 100.0 30 .................................... GAAATATACTTCAAGAATAATAAATTGGCA 11147 36 100.0 30 .................................... AAATGACAATTAACGGTACCATGGTCCAAA 11081 36 100.0 30 .................................... GGGGGAGCAACTTCACAGCAAGGAACCTTA 11015 36 100.0 30 .................................... AAACAATAAAAAATAGCTTTAGTGAAATTC 10949 36 100.0 30 .................................... ATTTTACATAAAAACCATTAAAAAAAGCGA 10883 36 100.0 30 .................................... TTATTTCAAACAATCAAAATGTAAATACAG 10817 36 100.0 30 .................................... TTATTTCAAACAATCAAAATGTAAATACAG 10751 36 100.0 30 .................................... CGCTAGAAGAGAAAATGAAATAACAAGACA 10685 36 100.0 29 .................................... TTCTGCAAGTCTTTTTAAATCTTCTTCAC 10620 36 100.0 30 .................................... TTGAGTTGTTCTATATTCGTCATAAATACC 10554 36 100.0 30 .................................... TATTGACGACATTTTATGAAGGAGATAGCG 10488 36 100.0 30 .................................... AAGAATTTAAAGAAAAAGGAATTATAGATA 10422 36 100.0 30 .................................... TTAATTCTAGTTTTCCATCAATTGTTGTAT 10356 36 100.0 30 .................................... AAACAAAATTTGATTTTGCAACACCGGAAC 10290 36 100.0 30 .................................... GAAAAGAATTAAATTCTGAATTAAACGAAT 10224 36 100.0 30 .................................... AATGGAGTTTAAGGTTGGAACATGAGTTGA 10158 36 100.0 30 .................................... TGTTAAGTCAAAAAGAAATTAAAAGGAATT 10092 36 100.0 30 .................................... TTCAATACTGCGAGAACAATGCAGATGAGA 10026 36 100.0 30 .................................... AATTTTGATTATTTCAATACTGCGAGAACG 9960 36 100.0 30 .................................... AAAATATACACCCTAAGCTAGTCAGATTAA 9894 36 100.0 30 .................................... AAATCAAATCAATAATAAAACAAATGGAAT 9828 36 100.0 30 .................................... TATAAATATTAATGATATGTTAACAGCATT 9762 36 100.0 30 .................................... TATAAATATTAATGATATGTTAACAGCATT 9696 36 100.0 30 .................................... AAATTTTATTATTAGTGGCAGGAGTATTAG 9630 36 100.0 30 .................................... ACATTTATGAAATTAAAAGAGGAAAGAGAA 9564 36 100.0 30 .................................... TACCTAATTCTCTTGAATTAGTAATTAGGT 9498 36 100.0 30 .................................... ATAACTTATTTGATAAACAATCTTACCATG 9432 36 100.0 29 .................................... TAAATTTCTAAAACTTCATTTTTAACATC 9367 36 100.0 30 .................................... TTTCCAGTATTAAATGTAAAAATGATACCA 9301 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 9235 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 38 36 99.4 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : TTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //