Array 1 233522-235076 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134283.1 Streptococcus anginosus strain NCTC10713 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 233522 36 100.0 30 .................................... TATACTGTTTTAATCCTCACACTCAAAGTT 233588 36 100.0 30 .................................... ACTAGCGTTAGAGCACGCACTACAGCATAT 233654 36 100.0 30 .................................... CTCAAAATGTGTCTTACCATACAGCGCAAT 233720 36 100.0 30 .................................... ATTCCCGCGAGGAATATAAGTAATTCTCAA 233786 36 100.0 30 .................................... ACGGCGAGACCATGAGTGGTAAGTCTTATC 233852 36 100.0 30 .................................... TGATAAAGAAAGATAGGAGGTGAGTATCAT 233918 36 100.0 30 .................................... GCTTCTACTAATTGTTCATTCAAAGCGTCA 233984 36 100.0 30 .................................... TAATCAAAACATCCAGCAACCAAGGCGACA 234050 36 100.0 30 .................................... TGCTATCTTTCTGCTATAATAAAAGCAGAA 234116 36 100.0 30 .................................... ATTCTTCTTCAAAGCTCGACGAATGAGCTT 234182 36 100.0 30 .................................... TTGGCGGGCGCGTTTGTCAATCACTTAGAT 234248 36 100.0 30 .................................... AAAATAAGGTTTTGAATTTTCTTCTTCTTC 234314 36 100.0 30 .................................... AATTTTTAGCCCCTCCATTTCCTCGACAAA 234380 36 100.0 30 .................................... TAAAGGGGAACGTGTTGACGTTCGTGGTAT 234446 36 100.0 30 .................................... GTCCTAGCTCAAAATCTCTGAAACTCCTAT 234512 36 100.0 30 .................................... AATTTTTAGCCCCCCCATTTCCTCGACAAT 234578 36 100.0 30 .................................... CTCCTGTTTTGCGCCCTTGGTTGCTGATAT 234644 36 100.0 30 .................................... CCCAATATTCGCTTTAAATTGTTCTGTCAT 234710 36 100.0 30 .................................... GAAACTGGTCGATTATTGGGTAGTCCCTTA 234776 36 100.0 31 .................................... AAGTCGGCAAGTGATGATGAGTTGCAAAGAA 234843 36 100.0 30 .................................... TAAAGGAATGTTGAAAGAACCATTTTATAA 234909 36 100.0 30 .................................... CAATCAGATTATTAAATTCCCCTAATTTGG 234975 36 100.0 30 .................................... ATTATTTAGGATCAAAGCGAAGGTTGCATT 235041 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGTCTGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGATATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : CACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //