Array 1 1860030-1860360 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NJFN02000003.1 Burkholderia glumae strain FDAARGOS_346 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
   1860030	    28	  89.3	    32	...AT......G................	GGGATCTCGACGTATCCGTTTCGCATGACGCG 	
   1860090	    28	  89.3	    33	...AT......G................	CTCGCGGTAAGTCATGCCGCGTCCCCGTTCGAG	
   1860151	    28	 100.0	    33	............................	TCAGGGCGACGTCAGAGAATCCTGTTGAAGCGC	
   1860212	    28	 100.0	    33	............................	TGCACGCACTGGCCGGTGCCGTGTGCGCTCGTG	
   1860273	    28	 100.0	    32	............................	AGAGCAGCAGGCGCTCCAGTTCGCGCCGGTAG 	
   1860333	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
         6	    28	  96.4	    33	GTTCGCTGCCGTGTAGGCAGCTTAGAAA	                                 	       

# Left flank :   TTCCGAGGCGGTTTTCACCAGCGTGCGGAACGCCGCCGCGTCGAGCGGCTTCGGATTCTTCTTGTCGCGCCCCATCGTCCAGGGGCCGACCAGCGCCGGCTCTGCCTCGCCGTCCTTGATCATCGCGACGGCCCAGCCGTCGTCGTCCTCGTTCTTGATCACGCGCGCGGTCCAGCCGCTGTCGTGCCAGAGGCCGTCCTCGTGGATCGGGCTGTCGTCCTGGGCTGGGTCGGTATCGGTGGCGTGGTCGGTCATGAGGCGTCGGGCGCGGGTTCGGGGGCTTGGGTGGGCGGCTATTGTAAACGTTTCGATCGGCGGCAATGGTGCGCGCCGCCGCAGCTGGCCGTGCGGCCGGGTGGTGGCTGCTGAACCCTTTTTTCGGCAGAATGCGCGAGGGGCTGCAAAATCAATGGGTTAGCGAGAGGCGGGAAATTTGGGGGGTGCGAGGTGTCGGGCGGGAATTGGTTTTTGAATCAAGGGGGTAGGTGGGTTTTTGTTCA
# Right flank :  AATGCTCGACGCCGCTCCCGACGTATTCGCCCGCCGTATTGTTGGCTGGCGCGTCAGTTCGTCGATGGCCACGGACTTCGTTCTTGATGCGCTTGAACAGGCGTTGTACGCACGCCAACCAAACGCCGACGGGACCTTGATACATCACTCCGATAGGGGGTCTCAATACGTCAGCATTCTCTACAGCGAACGTTTGGCCGAGGCGAGTATCGAGCCGTCCGTCGGCAGCCGTGGCGACAGCTACGATAACGCGCTGGCTGAAACGATCAACGGCCTGTACAAGACGGAACTGATTCCCGCCCGCCGAGGCTGAGGCAAACTACTACAGGCAACTCAGAAATGCTGCTGAAGTGCCTGCATCAACTTAAACCAACCGGCCTCCACGATTCCCGGTGCGGTTCACTCGCTTCGAGCGACGTGCCTACATTCACGAAGCATTCCTCAAACTTGGCTGCTCGATCATCTGTTGGAACATCTTCAGACGAGCTGAGCAGGGTTTT

# Questionable array : NO	 Score: 6.08
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCGCTGCCGTGTAGGCAGCTTAGAAA
# Alternate repeat :   GTTATCTGCCGGGTAGGCAGCTTAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCGCTGCCGTGCAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.14,0.37   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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