Array 1 112354-111834 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNN01000005.1 Puniceibacterium sediminis strain DSM 29052, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 112353 36 100.0 32 .................................... GATTTTCTTCCCGGACTTTTTGCAGACGTTGA 112285 36 100.0 34 .................................... CCCGTCGGCTCGGCTCAGGTCGACGCGCGGCTCG 112215 36 100.0 33 .................................... CTTTCTCCCCTTTTGGGTTATTTACGGACCTTT 112146 36 100.0 33 .................................... TGATTTACAGGCCGACAGTCTTTTCGAAGCCGG 112077 36 100.0 33 .................................... GGATGGAACGTCCCTGTTGTTTGTTTGTGTTTT 112008 36 100.0 33 .................................... AGAAAAATCGGCAGTATCATCTTGGAACCTTTT 111939 36 100.0 34 .................................... AGAAACTCTCCGGTGGCCCATGTGATTGGGTCCG 111869 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 8 36 100.0 33 GTCTGGACCCATGCCCGATATCGAGGCGATTGAAAC # Left flank : TGCGCCACACCTCTGAAACCCGACGCCTAAGCGACGATGGCCGGCCCTAAAGTCTGGCTTGTGGCCTATGACATTCGCGATCCCAAACGTCTGCGCCGGGTCCATCGCTTCATGTTGAATTGGGGCACGCCGCTGCAATATTCGGTCTTCGCGGTAGAGGCGCGGGCGAAGGATCTGAACCGTCTCAAGGCGGGCCTGTTCAAACGCATCGATCCGGCAGAGGACGATCTGCGTATCTATGCCATTCCAAATCGCGGAGGGGGATGGGCCGGGATGGCGATACAGAAGGACGGGATTATCTTGACCGGATCGCCTTTGGCCCGCACACTCGCCTCACTTCATGCGATTCCCTTACCTGAACTCAAACCCGAAAAATGAGGGAAAAGATGCGAAACGAAACAACCAGTGGTGGAATTTTCACTTTTACTTTTTCCGAATATGAAAACGTGAAATTAGCCCGAAAATCCCACTGTAAACAAAGGAGAAAATTAGGGGGTGCA # Right flank : CTAGGGTGTGTTGACAAAAGCGATTCACATCGCGGTGCAGTCATGATTCAAGCTGGTATCTGCTATGGAGACCAGCTTGGCACGAGACCTGATCTCGGACGAGGAATGGGCGTTCTTTGAACGTTTCATGTTGGCAGTCCGTGCGCCGAACGGGCGCAAACCGACTAACCACCGCCTTGTTCTTGATGGGATTTTCTGGATCGCGCGCACCGGCGCCCCGTGGCGTGACCTGCCTGAAGAGTTCGGCAAGTGGTCGAGCGTCTACCGGCAGTTCCGACGCTGGACACTGGCTGGGCTCTGGGAAGAGATCATGGACGCCTTGAACCATTGCGGGGCGGTGACGGACGCCCTGCAAATGATCGACGGCACCGTTATCCGCGCGCACCATCAGGCAGCGGGCGCAAAAGGGGGACTCCGCGACAGGGTTTTGGCCGTTCTCGTGGTGGCTTCACGACCAAGATCCACCTCCGTGTCAATGCAGCGGGTCTGCCCATGAGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGGACCCATGCCCGATATCGAGGCGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 2 114374-114203 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNN01000005.1 Puniceibacterium sediminis strain DSM 29052, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 114373 33 100.0 36 ................................. AACCCCGCCGAATCCGCGCTCAAGAATCTCTCTGTC 114304 33 100.0 36 ................................. AACGCAGCATTTTCAATTGCTTTAGCCACTTGCGAT 114235 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 3 33 100.0 36 GTGCTGACCCATGCCCGATATCGAGGCGATTGA # Left flank : AGAAAATGGGCTATGTTCTGCCGCTGGCCTCTGGCGGTTATGAGGTTGATCCCAGCAAACCCAAAGCCGCGCCCCCTCCGGCGCAGAGCCCGAACAAACCCGCACCCGCCGCGCGCCCGCGCTGGCGCAAGGGGGACCGGGCCATCAACATTGACGAGGGCGAAGAGGTCACCGTGATGGAAGACGTAGGCCCCAATGCAACAACCGCCTTGGTGCAATTCCATGACGGCGAGACTGAGTGTGTCAACTTGTCCTCATTGACCAAGGTTTAACGCGCAAGTCATGCCTTTGGTGCCCCGGCCAAGATCAAGATTTTCCCAAGCCCGCTTGACCGGCGATCATCGGCAGGGCATGCTGAAAACAGATGTGGAGAGTAAGGTGAGACCGGGTTTCAAAACACACGCAAAGGTAGAAAAATCTTTTTTACTTTTCGGAAATGCAAATCGTCAAGTTATCCACATTTTGCTCTTTGAAATCATTAGAAAAAAACAGGGGGTGCA # Right flank : TGTGTCTGTCCGGTTTGGATCGGACCACGCAGGTGGGTCGGTAAGGGGGCTCTCTGAAAGATGTGCTGCAAATTTGCAGTCCGCTGCTTTTGCTGGGCCGCTCTTATCTTAAGGGCATGACACACAGAGCCCCCCACAGAACCCTTTGCCTTGTCGCCTATGACATACGCGAGGATACCCGCCGCGCCCGCGCCCTGCGTGCGGTCAAGGCCTTTGGATTGGACGGCCAGAAATCCGTCCACGAATGCGCCCTGAGCCAGAGCGAACGGCGCGAGTTATCGCTGCGGCTCTCTGGGCTGATTGACCCGGACACGGACCGGATCATGGTCCTGCCACTGGATCCCCGCAGCACAATCGTGACCCTTGGCGGGCAGACCCGCGCACCGCTGGCCCCACGCGTTCTGGTGATCGCATGAGCACGCTTTACGTGGATCGGCGCGGTGCCGCGATTGACCTTGAGGGCGACACCATTGTCGTGCGCGTCGATGGCCAGCGCGAGG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTGACCCATGCCCGATATCGAGGCGATTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 125435-125609 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZNN01000005.1 Puniceibacterium sediminis strain DSM 29052, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 125435 36 100.0 33 .................................... CTTTCTCCCCTTTTGGGTTATTTACGGACCTTT 125504 36 100.0 34 .................................... TTAGCCGTGCGGGCCGATATAACCTCCCTGCCGC 125574 36 91.7 0 .................................TCT | ========== ====== ====== ====== ==================================== ================================== ================== 3 36 97.2 34 GTGCTGACCCATGCCCGATATCGAGGCGATTGAAAC # Left flank : TCGAGGCCGTTGCCATCACTCTGGACCGGCTTTGGCATTACTTCACCAACCGGCACGGCGACGCGCCATATGGCGAGGACGAGATCGTCGTGGACACCACAGGGGGTCTTGCCGTGACCTCGGTCGCCGCCGCAGCCTACACGCTGAAACACCCCAGACGCCGGATCATCTATGTGGATACCAACACCTATCAAACCAAAAGCTACAATGTGATCCATAATCTGGATGAAATGATCGCAGAGGCAGAGTCTTTCTATTAAGGCCGCCCGCCCGGCGAAACTGTGATCCGCCTGTGTCCCCGCGCGTGCGTCTTGCGACCCGAAAAGCTTGACGGACGGAAAGGGACAAGGCATGCTGAATTCAATTGTGGAGACGAAGGTGAAGCGGCAGCCCGAAACACACGTTAAGGTGGAAAAATATTTTTTACTTTTCGGAAATCCAAATCGCAAAGTTATCCACAATGTGCTCTTTGAAATCATTGGGAAAAATCAGGGGGTGCA # Right flank : TGCGTCAGGACGGGGCGCTCGGGTCATTCAGGGCGCTCTTCCAGACCAATAGGTTACCGGATAAGCGGCTGCACCCCCGACCCGGTGAACCAGAGCCCGAGAAAGGCAATCCCCTCGTCAAAACTGGCAATCCGGGTCTTGGCCGCATTGGGTTTCAGCCTGAGACCGCGCAGGGCGGACTCTGCCCGGGCGCGCATGGCTTCGGCCTGCGTCCGGCTGCGGGTCAGCAAAAGGATGTCATCGGCATAGCGCACGACCCGTGTCTGCCCCCTGTTCATCTCGTGATCAAAGGGCGACAGATACCAGTTCGCAAGCACCGGAGAGATCGGCGACCCCTGCGCAAGGCCCCGCCGCCAGCGGCCAAACCCCGATAGCCAGCGCCCCAGAACAGACCGTGTCTGGAAATCGGTGTGATCGCGCAAGGCGTCGATCAGCCCCTGATGCGGGACCCGGTCAAAGAAGGTCTCAATATCCAGATGAACGGCCCAGTCCCAGCCCTG # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTGACCCATGCCCGATATCGAGGCGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //