Array 1 1859261-1860500 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021136.1 Lactobacillus delbrueckii subsp. delbrueckii strain TUA4408L chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 1859261 33 100.0 32 ................................. TTTGACCCCAAAACTTGATCCGTGACCACCAC 1859326 33 100.0 34 ................................. TAGTTTACCCGGAATCAGCCCCTGACGATTGGGA 1859393 33 100.0 38 ................................. CACATCTCAGACATCGCCTCAGCACCAGCAGCATCAAC 1859464 33 100.0 34 ................................. TGTGCTAGAGTCACTCGCTTGAGCATAAAGGCCT 1859531 33 100.0 34 ................................. ACTCTGGCCCACAAGGCTCCAGACGATACGAAAA 1859598 33 100.0 33 ................................. TTGTATAGCCCTCAAGGCTCCATTTATGGCCAC 1859664 33 100.0 33 ................................. GGGTTACGCCGCCAAGCCTTGAGCATGGTTAGA 1859730 33 100.0 37 ................................. TGTGCAGTTCGAAGGTCTACGTCCTTAGTCAATCTTC 1859800 33 100.0 33 ................................. TGGAATCTCGCTATGTAAACTTTCTGGCTCACT 1859866 33 100.0 35 ................................. ATCTGGGAATAGGTGCTGGCCATGTCACTGGCAGA 1859934 33 100.0 33 ................................. GCCCAAGATGAACCAACTTTTGTCGCCTACCTG 1860000 33 100.0 33 ................................. TTGACGGGCTCTTTTGGTTCGTTAGAGCGTGAT 1860066 33 100.0 34 ................................. GTCAATCGACTTGGCCATATCCAACTGGCTACCG 1860133 33 100.0 35 ................................. TCTTATGAAGACATCTATCGACACTAAGCAAGTAA 1860201 33 100.0 34 ................................. TAGTGAGGTTGAATCACAGCAAGCCACAATTCGG 1860268 33 100.0 34 ................................. CCGAAGCTTGGTCAAGCGCCCAGCATTGATCAAG 1860335 33 93.9 33 ..............................G.G GCTGAAGGGAAAGTAGCAGCAGAAAGAAGAAGC 1860401 33 100.0 34 ................................. ATTTGCTGGTACAAAAGTAACAGAGTTACAACAA 1860468 33 84.8 0 ..........A...AA....T......C..... | ========== ====== ====== ====== ================================= ====================================== ================== 19 33 98.9 34 GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Left flank : CGGATACCCTCCGTTTTTATGGAAGTAAGTGATTGTAGATGATGATGGTAATTGTCAGTTATGACGTGAATACTGAAACTGCTTCGGGAAAGAAGAGACTAAGAAATGTTTCCAAAATATGTAACGACTATGGCCAAAGAGTTCAAAATTCAGTATTTGAGTGTCTTGTAGATTCTACAAAGCTTGAGGAAATGAAGGAACGCTTACTAAAGGTATATGATGAAGAGTGCGACAGCTTGTACTTCTTCAATGTAGGCAAAAAATATGAGAACAAAGTTCAGTCTTATGGGTGTAAACAAGTATTAGACTTGGGAAAGCCAGTTGTCTTCTAATTATCTAGACAGTGCGAGTGTGAAGCTAACAGAATTAGGCAGAGGATTCGCACTGTTTTTGACTATTTTTTTGTAGTCTTGAATATAAAATTGCAGTTTTTTAATGCTTTTTATATTTTGTATGCCCAATATTTAGCTGTGAAAATGCTTTTTTAACTAAATGTTGCG # Right flank : TATCGCTTAGATATGTGGATGCTTGATGGTCAAATTCCACTAAAAGCACTCCCTAGCGGGGTGCTTTTTAATATTTCGCTAAATCAAACGCTTCGCCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAACAAACACATGCAAGATATTTATATTGTCGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCGCGGTGCATTAAAAGAAGCCTGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCCGCCGGCTTAGGCCAAAACATGGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCGGCCCGCCTGGCTGAAGCCCAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.40,-9.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //