Array 1 4509667-4510731 **** Predicted by CRISPRDetect 2.4 *** >NC_015703.1 Runella slithyformis DSM 19594, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 4509667 37 100.0 36 ..................................... CACCAAGTTGTGTCCTCATGGCGACTTTTGCATTGT 4509740 37 100.0 38 ..................................... CGCGTTTACACATACGCAGCAAGCAGAGATGCGGCTCA 4509815 37 100.0 35 ..................................... CGTTGGAAAAAGTTCCTTAAGCGCAACGATGCCGG 4509887 37 100.0 35 ..................................... ATTATGCCGCAAAATTTAGCCGATTGGCTATCGGC 4509959 37 100.0 35 ..................................... CCTGCTGCATACTTTACCCGACGGGTTTCGCAATG 4510031 37 100.0 37 ..................................... CCAATTTCAAAATCATCAAAAAGACATCATTTGATAA 4510105 37 100.0 37 ..................................... TATAATGATGTTGGAGCTTTAACAGGTTGGTGTGCTT 4510179 37 100.0 37 ..................................... AGATTTTGTAAAAACTTTACAGTTTTTACAAGAATCT 4510253 37 100.0 38 ..................................... ACTGTTGAAGTATCTGTTGATGCTATTGCTCAACAATT 4510328 37 100.0 33 ..................................... GTGGATAATTGTGTTGGACAAAGAATATCACCA 4510398 37 100.0 36 ..................................... ACAGAAAATCTTTATACAATTACCTTAAATGCTTTT 4510471 37 100.0 37 ..................................... CCAATCATTGTCTGTGTGTGTATCTACTAAAGAAGAT 4510545 37 100.0 39 ..................................... CTTATATTGGCAAGGAGAATTGTACTATGGTACATCTTG 4510621 37 100.0 37 ..................................... CATTTAAAGGATTAAGACTTGTACATCAAGAACAACT 4510695 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 15 37 100.0 36 GTCTTAATCCTTGTTCTGGTGGATTATGGTTTCTGAG # Left flank : AACGAAGGTTTTTTTCAATCGGCCAAAGTCGGGGTTTTCGTGGATGATACCGAATATACCCCGCCGTACGTCAGCATTATGAACATTGACACCGTGAAGAAGAAGGAATTTAAAAAAGCCGCACAACTCAAACTGTTTAAACCATGAGCGCCCCAAAAATAACATTCAATATTGTAAAACGCCTCTATCCACTCCACCAGATCAAGGGCGTAAACGAAGCCTGGAAAGAAGGAATCGGTTGGTTTAAATCCGCAAACGGACAGAACATCAACGAGCAAGGGACCGCCGAGCAACAGATTCTATTTTGCAAGGCAATAGGAGCCACCAGCGTACAACTGTACTTAGAAGTAACCATGAGCGGCCTCACTCATAAAGTGTATGCAGATTATAAAATGGCCGATCTCATCGAATGAGCGTTATCAATAGTAGATTCAATGAACAAAAATCCCGTCAGCGCTGCCAACGGGATTTTTTTATTTCTTAGCTACTGAAAGGCCATA # Right flank : GAGCAGGGCTTGCCAAGCCTTTGATTGGCAGCAAATTATATTTTTAAATATATAATAATTCATATATTTTATTGGTAATGCAATATGTTTTTAGATGCATTGACTCCTTAAAATAAATCCTAAAAAATGAACTTTGCAAGGCAACATCAAAAAAACAAAGTAGTCTTGGATGAAGTTTGCAGTTCCAACTCAAATGTTTTGCCAATACACAGCAGGCTGTTCGCTGGCAGGAGATATTAGAGGTGGAAGCGAAGGGGTAAGTTGAAATGTAGAAGCTAGGATTTTGTCCGTTCGTTATTTTTTGATACGTATTGAGCCCAGCAACACAAAAAACCCGCCAACACAACTGATAGCAATCATAAAAAGCAGCTCAAATAATGTTATCTCTGGCGGTCCAAAAACAGCTGTCAACCAAGGCGCAAAAGCCAGCGCCTCACCAAAGCCCTTTAATGCTCTTCTCATTGTAACTATTCACAGTTCGTACTTATACCACAGCGCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTCTGGTGGATTATGGTTTCTGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 5772288-5784494 **** Predicted by CRISPRDetect 2.4 *** >NC_015703.1 Runella slithyformis DSM 19594, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 5772288 30 100.0 36 .............................. TGGTCGATGCCGCACAGAAGGAGTTTGAGGGCATCG 5772354 30 100.0 36 .............................. TTTTCGGGGTTGGTTTATATTCCGGTTTGATTTTGC 5772420 30 100.0 37 .............................. ACGGGCAAAGAATCAAAACAGGCTTTTTTGTGAAGCG 5772487 30 100.0 36 .............................. CGTTGAATCCCTACCTGCTTTTAGGGTTTGAAATAT 5772553 30 100.0 36 .............................. AAAGGAAATTCAGCGCATTACGAAGGAGACGGCAGC 5772619 30 100.0 36 .............................. ACGCTTTGAGCGACGAAACGATATTAGCCGCTGTGA 5772685 30 100.0 37 .............................. AAATCAGGGACGCAAAACTCGATGCACTGGATGCCGA 5772752 30 100.0 37 .............................. ATTAAACCACACTCCCAACACTATAGCCCCTATCAAA 5772819 30 100.0 36 .............................. AAGAACTTGCGGTGCTCACCAAAGAGATTCAGGCCG 5772885 30 100.0 36 .............................. AAAGAACCCGAAGCGAAGCCGCCGCCGCCATTAAAG 5772951 30 100.0 37 .............................. ATATCGCTTTGGTGAGGTAGGAAAAAACAACGGTCTT 5773018 30 100.0 36 .............................. ACAGTGCAGGCTGCAAGAGGGTTGGAGGACAATGGA 5773084 30 100.0 37 .............................. ATTCCACATCCAAGCCAATGTAGAGGTAGGATTTCGC 5773151 30 100.0 36 .............................. AGTTTACCGCCAAAGTGGAGACGTTGACGGGACGCA 5773217 30 100.0 37 .............................. AAAAAGGAGTAAAAACAGTTTCGCCCGGGTTTGTGTA 5773284 30 100.0 36 .............................. ACTTTCAGCGACTCGCCAACTTTCAGCGACCCGTCA 5773350 30 100.0 35 .............................. TGCGTTAAGGGGGGAAATAAGAAGGTGCAGTTGCC 5773415 30 100.0 36 .............................. ATTCACTTTCCGCGTGATCGGTGTTTCGGTAGTTGA 5773481 30 100.0 35 .............................. AGCAGTACAATCAGGCACGCGTAAGGGTTGCGGAG 5773546 30 100.0 36 .............................. ACTCATGCACAATCAGAAACTTGCCGAAGATGCCGC 5773612 30 100.0 36 .............................. TGACATTTTGAAATTTAAGCCCCTTAGCACTAGGGT 5773678 30 100.0 36 .............................. AAATCAGGGACGCAAAACTCGATGCACTGGATGCCG 5773744 30 100.0 35 .............................. TGACATTTTGAAATTTAAGCCCCTTAGCACTAGGG 5773809 30 100.0 35 .............................. CTCCCTTTTAAAAAGGAGAGCCTCATCCATAAAGG 5773874 30 100.0 37 .............................. CTTCATACTCTATCTTCAGGAGTTTTTTCTTGAGGTT 5773941 30 100.0 37 .............................. GTATATGCTGAACTACCTTCCCGATAATTGGATATGA 5774008 30 100.0 36 .............................. AGGTTTTTTCATGGTCCTCCACCTTCCAGCCGTACT 5774074 30 100.0 37 .............................. ACTACCATCAGGTTTTTTTACTGCACCCGCAGATTTA 5774141 30 100.0 37 .............................. CTTCTTTGATGGTAGAGGTGTCGATGTTCATCTTGAC 5774208 30 100.0 36 .............................. GTATTCTCAAAAGATTTGAGTTACAAAGACAGCCTG 5774274 30 100.0 35 .............................. AAAGCCGACAAAACAAAAGGAGTTGTTAAGCTGTC 5774339 30 100.0 37 .............................. ACAGTGCCGCCTTGTAGATGCTTGCGTCGTAGGTCAT 5774406 30 100.0 37 .............................. ACGTCGAGCGGTTGGCGTTCTGACTCTTAATATGCCT 5774473 30 100.0 37 .............................. CAACAGGTAAAACGGCCTAATGGCATACGAGGAACTA 5774540 30 100.0 36 .............................. ATTGTCTACGTCTGAATAATGGGCCTTGTAGTTTTT 5774606 30 100.0 37 .............................. ACTATATTTTATTTGGGGAAAAACCGGAAGAACCCCA 5774673 30 100.0 37 .............................. GCTCATACCACACTCCCAACACTATAGCCCCTATCAA 5774740 30 100.0 37 .............................. ACGGGTTACGGACGGGTCGTACTGACAGGTTTTTACT 5774807 30 100.0 36 .............................. AAAAGCCTTGTTGAAAAAGCGTTGGTCGTATTCGAT 5774873 30 100.0 36 .............................. TTCTTTTCTATGGCTCCATTTGCAAATCTTGCTGAT 5774939 30 100.0 37 .............................. AGTTAAATGACGAACTCATTAAAATAAATTACAAAAG 5775006 30 100.0 37 .............................. TGAAAGTTGCTGATTATCGTAAATCATAGTTATGATT 5775073 30 100.0 36 .............................. TGTCAGGAAGCTTTTTGGTTGGATGAATTGGATATA A [5775078] 5775140 30 100.0 36 .............................. CCTTTTGCCCCATTTTGGGCGTGTAGGTTATTTCGG 5775206 30 100.0 36 .............................. AACGTTGTATTGGGTTAGATTGCAGTCAGTCCGGTA 5775272 30 100.0 36 .............................. TCCCAACGCCCGCAGCCGGTACATTTGCGAATGTGA 5775338 30 100.0 37 .............................. AAGATGGCCGTCAGCACTCAATTGTTGAGGGTAAAAC 5775405 30 100.0 36 .............................. TGAAAGTTGCTGATTATCGTAAATCATAGTTATGAT 5775471 30 100.0 36 .............................. TGCCCGGGCAGTCGTGGCATAACTACGGGCTTGCGG 5775537 30 100.0 35 .............................. TAAAATGAGTATTGCAATGGAATTAACGATTTATG 5775602 30 100.0 38 .............................. TAGATATTTTTACCTTCTATTTCGTCCGAAGCAAGCTG 5775670 30 100.0 37 .............................. CCGCGCAGTATGGGGGGATATACTGCAACATTGCGCT 5775737 30 100.0 37 .............................. AACCTGCCGAAACTGCTACTGCCTCTGTTGTAGAGCG 5775804 30 100.0 37 .............................. ATGGGCGGCTGTTTTGGCGGTTTCAAACGCCTTCCGA 5775871 30 100.0 38 .............................. CGTCCCGCGCCCTGACTTTCCTAAACTCTGTTGGTCGG 5775939 30 100.0 37 .............................. TTTTGTTGGATAGACGAATTGGTGTTGCCCGCTCCTT 5776006 30 100.0 36 .............................. TGTCCACGACGGCAAACGGCAAAGTATTGACCGTGT 5776072 30 100.0 35 .............................. ACTCCTTCCAATCTTCTTCCGTGAACGCGTCGGCC 5776137 30 100.0 37 .............................. GCGACAGGCAATAGAGTCGTTTGGCAGCGAAATAAAG 5776204 30 100.0 35 .............................. ATGCCGACTATCTAACGAATATATTCACGGAGTTG 5776269 30 100.0 36 .............................. GTAACCCTTGCGACATATAATCCCGCTGCGGTTGTT 5776335 30 100.0 37 .............................. TTGTATTAGTTATTGATTGGTTGCTTTGATTTGTCGT 5776402 30 100.0 36 .............................. AAGAAAAAGGCGCGTGCATTTCTCAATATCAACGCG 5776468 30 100.0 35 .............................. ACACGTCCGACGTGCTGAACAAAGTAACGGGCGTG 5776533 30 100.0 36 .............................. CCACCAACTGCAAGTCATACCCGTTGGCGGTTCGGC 5776599 30 100.0 36 .............................. TTGCCGTCGCAGGAGACACTCCGAGCAGCATTGCCG 5776665 30 100.0 36 .............................. AATACCGTACCTTTTGTTATGACCACGCCCGCCCCA 5776731 30 100.0 37 .............................. TTCCGACGGATTCATCTGAAGTGCAACGTTGCAGTAT 5776798 30 100.0 36 .............................. AAAGCTAAACGAAAAGGAGTACGCCTACGACATGCA 5776864 30 100.0 36 .............................. TCGTTTTTCATGTAGAAAGCGCAGAGACGATTGAAA 5776930 30 100.0 35 .............................. AAATATTATACCTGTTTACGCCACTCATGCCGCTG 5776995 30 100.0 36 .............................. TTTTCCAAAACTTCGGCCGTTGACAGGTTCGCGTCC 5777061 30 100.0 36 .............................. ACAATAGCGTGCATGAGGCATTGGCAAGCGAGGATA 5777127 30 100.0 34 .............................. TTGGGAATTTTAAGTACATAAGTTTTGCACGGGG 5777191 30 100.0 35 .............................. CTTACCTAGCCGTAGTTCTCTCTTTTGCCGGGGTA 5777256 30 100.0 36 .............................. TGCTTCGTACTTATCGTCTGCCGGGAGTACCGCTAC 5777322 30 100.0 36 .............................. TACTTTTTGGTGACGCGCGAAACTAAAAACGGTGTG 5777388 30 100.0 37 .............................. AAGAAGCGCCGAGCATTAAGCCGCGCACCATCACCTT 5777455 30 100.0 37 .............................. TTCCAGGTTTTCGGCAAGGGCTTTGATTTGGTCAATA 5777522 30 100.0 36 .............................. ATAGCAGCTCTTCCGCTACCAACGTCCCTGCCTCCG 5777588 30 100.0 35 .............................. ACGCGTTCGTGTCTCCGTCGATGCGTCCCATCGGT 5777653 30 100.0 37 .............................. TCGCACACGCAAGCAGGATGCCGTCCGTGTTGTCGTA 5777720 30 100.0 35 .............................. ACAATGCCGCCTTGTAGATGCTTGCGTCGTAGGTC 5777785 30 100.0 37 .............................. TTGTTCAGCCACAAGTTGCGCTAATTTCGGGTGAAGG 5777852 30 100.0 38 .............................. CTTGCCTCAGGTGCAACGGTTGACTGTGCGGGTTGCGG 5777920 30 100.0 36 .............................. TGGAATAAGATGGAACACAACATGAACGGCATTCGG 5777986 30 100.0 34 .............................. AAATAAAAAACAAGAGAAAAGACTGGAACCACAA 5778050 30 100.0 37 .............................. TTGAGTCCTATGACTTGGAATCTACGCTCGAAGTCAT 5778117 30 100.0 36 .............................. ACTTCACGTAGGTCAGATGCCGGCACCCGTGTTCAC 5778183 30 100.0 36 .............................. ACGAAGCGGGGTTTCAGATCAGTACGGTCGAACAAT 5778249 30 100.0 36 .............................. ACGAAGCGGGGTTTCAGATCAGTACGGTCGAACAAT 5778315 30 100.0 37 .............................. TCGCAGATAGACCGGGACACAGTTCCAGGGTGGGCAA 5778382 30 100.0 36 .............................. ATTGACGGCCCCGGCCACAAAAATCAACCTTTCAGC 5778448 30 100.0 35 .............................. GTGCAATCTGCTCATAAATCTTGCCGGTACGCCCG 5778513 30 100.0 36 .............................. ATAAAGTTTCCTACCCACGTTTCGAGTACCGGGGTT 5778579 30 100.0 36 .............................. CCCGCTACCGAAGGGTTGTAAATCCAGTTGCCTGTC 5778645 30 100.0 36 .............................. ATATCACCTTTTCCGTGGGGGTAATGCCCGTATTGA 5778711 30 100.0 36 .............................. AAAAAGCATCAACGGCAAAGTGACGCTGAAATTCCA 5778777 30 100.0 36 .............................. AATGAAGTAGCGCAGCGTGTCAAGTAAGTGGCCAAC 5778843 30 100.0 36 .............................. CAACAAAAGATGCTGATAGTTTGACCAGGATTTTGA 5778909 30 100.0 37 .............................. TGCGGTCAGCACTCCGTTTGGATTATTGGCATTATCA 5778976 30 100.0 37 .............................. AAAACTTATTGGCCTTGTCGACGTTGGCCCGCGCCTT 5779043 30 100.0 36 .............................. ATCAGCGTTACAGTATTGACACGAATAACAATGCTG 5779109 30 100.0 36 .............................. TTTGCGCCGACAACATACTTTTTGCCGGTATCGGAA 5779175 30 100.0 36 .............................. TAAAAAATAAAACAAGCAGAGAGCGCACCCCACGAA 5779241 30 100.0 36 .............................. AAAGCAAGGAAGCATTGGGGGTTAAGTTGCGATACT 5779307 30 100.0 37 .............................. AGGCGCAGGCGGAAGCGGCTATCGTGGAGATTGTGCG 5779374 30 100.0 36 .............................. TGATGGTTTTGGCGTAGGCACCTTTCCGGATAATAT 5779440 30 100.0 36 .............................. TAATCTGCGCGGGCGTGTAGCCTCGTTCCAAAAGGT 5779506 30 100.0 36 .............................. TGTCCACGACGGCAAACGGTAAGGTGTTCACCGTGT 5779572 30 100.0 35 .............................. TGTACAAAGCGATGCAGGCCTGCGATGTGTGGTAT 5779637 30 100.0 36 .............................. CAGTTTTTTGCAGGCATTACGGCTGCCGGTTCCTTT 5779703 30 100.0 35 .............................. TGGCGAGGCGGTTAAGAATTAGTTGCATCGGTTTG 5779768 30 100.0 37 .............................. TCAAAAGGTTGATATTGTTTTGCAGCACATTAAAGCT 5779835 30 100.0 37 .............................. TCAATCAGTGCGGTATTGTGACGATCAATGATTTTCT 5779902 30 100.0 37 .............................. TTTGGATTGTTGGCATTATCAAGCGCCTGCCGTTCCG 5779969 30 100.0 35 .............................. TATAGTGCAGGGAGGTAAAGCACATAAATCGGAAC 5780034 30 100.0 34 .............................. TTTATTACAATGCCGTTCTAAAAGACATTGCCGC 5780098 30 100.0 38 .............................. CTTATCCCTGAAGGTTGAGGGACTAATTCTTCCTGCTT 5780166 30 100.0 36 .............................. CTGTTAAACGTTGTTCTAAGCAGTGCGGCTCGTGCG 5780232 30 100.0 35 .............................. TTCGTTAAACTGCCGACGTTTGGCAAGTGGTTTTA 5780297 30 100.0 37 .............................. CCCACTGGTAGCGTGTTCCGGTATAATTCCCCCCTTT 5780364 30 100.0 37 .............................. CTACGCAAGTATATCAAAAGTATAGCCACTAATCCAA 5780431 30 100.0 36 .............................. TACGACGGAAAGTAGATGTTGGTCCTATTAATTCCC 5780497 30 100.0 35 .............................. TATAGTGCAGGGAGGTAAAGCACATAAATCGGAAC 5780562 30 100.0 36 .............................. AGGATTGATGAAAGGGCATAGCGTCTAATATAGCTT 5780628 30 100.0 37 .............................. CACTTTAACCGGGGTAAAAAATGTCTAACCTCTGCTT 5780695 30 100.0 38 .............................. TTTGGTTTGTATCGCTTCTTTGAGTGTTGCCCCTTCCG 5780763 30 100.0 36 .............................. AAATGAAGCCTGACGAGGCGGCTTTTCAGATCAAAG 5780829 30 100.0 36 .............................. AAGGTCTTTCCAATGCAAGCGGTTATATTCCCAAGG 5780895 30 100.0 37 .............................. TTAGGCGGCCGGGCTTTAAGATTCGGTACAGTTCTTT 5780962 30 100.0 35 .............................. TTAGGGCAAGAGGCTTTGAAACAGGCGTATTTCTC 5781027 30 100.0 35 .............................. CTGTTACACTTTTATGCTACCCGTTTAATAGCCGG 5781092 30 100.0 36 .............................. GCAGTTTTTTAAAAATAAGTTCATTGCTGCTGTCAA 5781158 30 100.0 37 .............................. CATCCGCGTAACCCTGCCCCAAACTGCCCAAATACGT 5781225 30 100.0 36 .............................. AAGAAGTCTATGTAAGACTTCATCTTTTCTTTGATT 5781291 30 100.0 36 .............................. CTAGGGTTTGATTTTGGCAATTCGTTTCAGTAATTC 5781357 30 100.0 36 .............................. GAGACAAGACCTGTAAAACCTTTAATTTTCACTGAG 5781423 30 100.0 36 .............................. TTACGATAACATCCGAACTTTGCCATCCCCATGTAG 5781489 30 100.0 36 .............................. AACCGTAGACACCGAAAAAGCGATTCGCTCCTACTA 5781555 30 100.0 36 .............................. AGTGCTGGGCAAGGTGCAATTATTAAGGCAATAAAT 5781621 30 100.0 37 .............................. TTGGGAGAAAATTACGACTATCTATCCCGTTTGTGCG 5781688 30 100.0 37 .............................. TCTTAGATAAATCTTTTTTTGTATCCTCAATTATAGC 5781755 30 100.0 36 .............................. TGCGCCAAAGAATGCGATCGTGTTTTCAGTCGCACC 5781821 30 100.0 35 .............................. ATGCCTCCAAGGTGAAGGCATAGGGAAGTTCTAAA 5781886 30 100.0 36 .............................. TGCGCCAAAGAATGCGATCGTGTTTTCAGTCGCACC 5781952 30 100.0 35 .............................. ATGCCTCCAAGGTGAAGGCATAGGGAAGTTCTAAA 5782017 30 100.0 36 .............................. CAACTAAAATGACAAAAGCAGAAAAATTCTTATTAA 5782083 30 100.0 36 .............................. ACGGTCAGGCCGTCCTGATAACGTGCGCCCAATTGA 5782149 30 100.0 36 .............................. AGACCTAAGTGATGACAAAGACGATGACTTCAAAAT 5782215 30 100.0 35 .............................. AATGTCATGAAGGGTATTAATTTCTACAACTTCTC 5782280 30 100.0 35 .............................. AATGATGTAACTCGGTGCGACAGCTACCTCATGGG 5782345 30 100.0 37 .............................. ATCAGCGTTACAGTATTGACACGAATAACAATGCCGC 5782412 30 100.0 36 .............................. ATCTTGACTGCCAACACCACTTCTTTCGGTTGACAA 5782478 30 100.0 36 .............................. CTGCTCCACACTTCGCAAACAGTTTCTTCCGGCAGT 5782544 30 100.0 36 .............................. TTTAAAAATAAGTTTCTGTTTCTCAATCAGGGCAAT 5782610 30 100.0 37 .............................. AAGAAAGTGGACTACAGCAACATTCAAAAGCTGGAAA 5782677 30 100.0 37 .............................. CTGTCTATTTTCTTCAGGCGAACGGTGTTTGCCGCGT 5782744 30 100.0 37 .............................. ATGGATGCCATATTGTCAAAGAAATCGTTTTGAGTAG 5782811 30 100.0 35 .............................. TAGCTGTTATTAAGTTATTAGTGTTGCTCTATACA 5782876 30 100.0 37 .............................. ATGACGCCTTGGCTGACCTTAACGACATTCCTTTTAA 5782943 30 100.0 36 .............................. TGCCTGCGTGTCGCTTCACGTTCACAAAGAAACGGC 5783009 30 100.0 36 .............................. TGCGAAAGGTCTACGAGACCAACTTCAAATCAAAGC 5783075 30 100.0 36 .............................. AATGCGAAAGCCGCGCATGGAGGCTTCCGAATAGAT 5783141 30 100.0 36 .............................. GTTCTCAAAACTCGAGCCCGTCCCTAAAGGAGTAGA 5783207 30 100.0 37 .............................. TTCATTTAATCGCCGAAACAAGGCTTTTCAGTATGTT 5783274 30 100.0 35 .............................. ATCGAAGTGACCGTGTACAGGTAGTTGAGTGTCCC 5783339 30 100.0 37 .............................. AACAATACAAGGCGAAAATTGCCGCCTGATAGTGAAA 5783406 30 100.0 36 .............................. TCGTAAAATTGAAAGGCTTTAAACTGTTGAGCAATG 5783472 30 100.0 37 .............................. GGCTTGGGTTGATGCAGCCACAAAACGGTACAACGAA 5783539 30 100.0 36 .............................. TTCAAGCGCCACTGCTCATACTTGGCAAGTAGCGTT 5783605 30 100.0 36 .............................. AAAATTTGCAGACTATATCCCCGGTCTGCAAGCGGT 5783671 30 100.0 36 .............................. AGTTCTGTCAAATTGGCAAAAGCGTTAAGTTGCAGG 5783737 30 100.0 35 .............................. AAAGCGTCCGATTAGGGTTGCCTATCGGCTCCGTC 5783802 30 100.0 37 .............................. AGGCTTTCCGATGAATGGGTAGAGGTTAAAACTTCGG 5783869 30 100.0 36 .............................. AACATTGTAACCGTTACAATTCCTTAATATGGCACT 5783935 30 100.0 36 .............................. GAGGATGAATACGAATAAGGTAAAATTCAAAAAAGA 5784001 30 100.0 36 .............................. GGCTTAAAGGAGCACCAAGCCAAGTATCTCAAATTT 5784067 30 100.0 36 .............................. TTAGGCAGGAAGGTATAGGCTGATTGGTGCAGCGTT 5784133 30 100.0 37 .............................. AAAGATAATCCTGCCGGATGGGTAGTTGTAAAATTTC 5784200 30 100.0 36 .............................. ATCAGATTTTTCATCGACATTTAATTTTGTATCTGT 5784266 30 100.0 36 .............................. TCGAAAATTCGTAGCCGACTGCAGTAAAATAGGTTT 5784332 30 100.0 37 .............................. CGTCTTACTTCCTCACGTTTTACCTGTGCCTCGGTTT 5784399 30 100.0 36 .............................. GACGCCAACATTTGAAGAAGTGCTACAGGCACAAAA 5784465 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ====================================== ================== 185 30 100.0 36 GCTTTAATCGTACCTTTTTGGAATTGAAAC # Left flank : GTATGTATGTAATATTGGTGTATGATATTGGTGAAAAGCGGGTGGGCAAGATGCTGAAGCATTGCCGCAAGTATTTGAATTGGATTCAAAACTCCGTGTTTGAAGGCGAGATCACGGAGGTGAAACTCAAAGAGATGGTGAGTATTGCCCGGGGCATCATGAATGAAGAACAGGACAGCCTGATATTGTTCAAGAGCCGCGATGAGCGTTGGCTGGACAAACAGGTGATTGGCGTAGAGCGCATGAGTACCGATACTTTTCTGTAATTTTCGGGACCCACGTTCCATGCTCCCGTTGTCCGGCGGTCGTCGATGGCTGATTCGGAGAGGTCTTTGACGTACTGCATTCTTACAAAATCCCTCACCATGGGGATAAGCCGTTGATTATCAGCCGTCGTCGAAGGTCCAATAAAATCATAGGATTGGCCTTCGACGACTTTTATGTTTGGAAATCATCAAAAAAACCCGCAAATTGACCCAAAATAGCCCTTTTCCCAACGG # Right flank : TCGGAGGTGCGACCGTATTGGATTGTACGTTTGGAAGAATTGAAAAGGACGTGCCAACCATAAAAAAACAGAATTCATTTTCCGGCGGTGATGTCTAGTTTAAGCGTCAAAAACTCTCTTTTCAAACCTCTTATTTCGTTCAACACTTCCCCGAACTGTACGTCTGATTCGCCTTCGGGTACATCGGTACTCATAAATAAGGTAAATTCCCAAATCTCCAGTACTTCCTCCAATTTTACGCGGTAAGGTGCGTACAGACTGTTGAGTGAGCTCAGGATAAAAGCAGGGTCTGCCGCTTTTACGTTGGGAACAGCAGTGACCGTTTTAAATACAATGTCTTCTGCGGTAATGAAAATGTACGATTTATTCTCTTTTACACTGAACCAATTCTGGACATACGACCCTAAAATATATGCCCCGTCGGGGATGGGATACATAGAGTCCCCTTCAATCTGAAACATCCGATACTTACGGTTCTCGGGAAGAATGGGCAGACGAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAATCGTACCTTTTTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //