Array 1 148270-145741 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMWI01000002.1 Micromonospora maris strain NRRL B-24793 VAB18032circular_genomeb, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 148269 28 100.0 33 ............................ ATTGAAGGATCCGACGCACAACGCTAAAGCCAT 148208 28 100.0 33 ............................ GTGGTCAGCCGCGTCCCGGACATGCTGTTTGGT 148147 28 100.0 33 ............................ CCGAGGTAGCTCTTCTCTGCGGCTGTCTGCTGC 148086 28 100.0 33 ............................ TGCCCGTAGCCCAGCACCGGGTTACTCCGGAAC 148025 28 100.0 33 ............................ CGGGCAGAAGTTCGCTCAACTCGTCACGGCCCT 147964 28 100.0 33 ............................ CTACGTCAGCCCGGCGGCCGGCGTTTCCCTGGC 147903 28 100.0 32 ............................ CTGGCCGAGCATGTCGAAAAAGTTCTGCCAGA 147843 28 100.0 33 ............................ CAGGACTGGCGGCACCTGGCCCGATCCCGCCAA 147782 28 100.0 33 ............................ CCTAGCCCGTGTCTGCCGGGCGATGTTTGGAAG 147721 28 100.0 33 ............................ GCGGCGCGAAGCCGTGTTCGGGGTGGCCGGCCT 147660 28 100.0 33 ............................ CTGGCCGGCACCTTCACCGCGCCGTTTGCCGCC 147599 28 100.0 33 ............................ TCGTCCATATCGGGGTCGTAACCCTCGCTGTCC 147538 28 100.0 33 ............................ CCCAAGCGCCTTGAACGAATCGGCGGCGGCCTT 147477 28 100.0 33 ............................ CTCACCGAAAGGCACACCCGATGGCACGCTTGC 147416 28 100.0 33 ............................ TCACCCGGGCCCGCAAGGACGAGAAGGAGCGAC 147355 28 100.0 33 ............................ CGGGGCGGAGTGGATCCGCTGGTTCTTGCCGAA 147294 28 100.0 33 ............................ CGGTCTCGCGATCAACAAGCGGACCGGTGAATT 147233 28 100.0 33 ............................ CAGCCACAGCGCCGCGTTGACGCTGGGGGTGAT 147172 28 100.0 33 ............................ GAGGGCACCGAGTACACGACCCGGCCGGGCACC 147111 28 100.0 34 ............................ CCCGCACCGGGTCTGCCGTGGCTATGGTGCCACC 147049 28 100.0 33 ............................ CTGGGCGGTGAGGGCGGTCGCCCGCTCGGCGGC 146988 28 100.0 33 ............................ CTGGACTGGCAACCGTCGGACTGGCGTCGGGAA 146927 28 100.0 33 ............................ CGTCATCACCACCTGGGCCCGCCACATCGCCAC 146866 28 100.0 33 ............................ CAGAACGCCGAACACGTCACCTACGCGCATGGC 146805 28 100.0 33 ............................ CCACAGGACTACACGGGCCGTCGGGGCGACTAG 146744 28 100.0 33 ............................ CGATCCGGATCGTGCTCGCCAAGAGGGCACATC 146683 28 100.0 33 ............................ CTCCACCCGGACCCACCTACCGCAAGCAAGGAG 146622 28 100.0 33 ............................ GGGGATTCCGTCCCAGCGGTACATGGCGAGCCT 146561 28 100.0 33 ............................ CGAGGTCCGCGACGACGAGGAGCTGGCCCCGGT 146500 28 100.0 33 ............................ GGGGATTCCGTCCCAGCGGTACATGGCGAGCCT 146439 28 100.0 33 ............................ TCGGCAACCAGGCCAAGCACTGGATCGGCTGGG 146378 28 100.0 33 ............................ CCCGCCTCCGAGTGCACGTACCGGCTCACGTCC 146317 28 100.0 33 ............................ CCCACCACGGCCGAGCCGAAGCCGGGCGATGGG 146256 28 96.4 33 ................A........... TCGGTCAGACGGACTGGTTGTAGAGGACGGCCG 146195 28 100.0 33 ............................ CGGTGATCACCACTGACCAGATCGCCATGGCCC 146134 28 100.0 33 ............................ CCGGACTCCGGCGCTCGGGCTGTCGTACGCCAA 146073 28 100.0 33 ............................ CGCCTGTGACACCCGGCCGAGCCAGGCCACCTC 146012 28 100.0 33 ............................ TCTGTGAGGGACGTTCGGGGGGAAGGGTGGCCA 145951 28 100.0 33 ............................ CCAGCGGACGAGTCTCATGGGGTACGCCTCCCC 145890 28 100.0 33 ............................ CGGACAGAGCGACGCCAAGGTGGGCGCCGTCCT 145829 28 100.0 33 ............................ CCCGGACTCGTGGGGGTCGCGCGGTATGGCCGC 145768 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 42 28 99.9 33 CTGCTCCCCGCGCACGCGGGGGTGATCC # Left flank : ATCGCCGGCGTCATCTCCCGCAGCGACAACCGGCGAATCGCCGGACGCGCCTCCAGCACCGGCAACGGGGCTATACGCATCGACGTCCGGCGGCTGTCCATCCCGGTCGTGGCGCTCGAACAGCAGCACGCGTACGGACACGCCTTCCGCCAACTCATCGAATTCCGCACCACCCTGGAACGAGCATCAGCGACCGGAGTCACACTCGCCCGCGAGATCAGCGACGCGCTGACATCAGGCACCCTTGGCCTCACATCCTGATCGACCCCCGATGAACCTGGGCAGTTCGGCAGCCAGGAGCGACGACCAAACTGGTCGTCCAGAATCGAGCCGCCCGAATCTGCGGCCCTACCACCCGCGATTCGCCCGGTACGCTGCTCCCAGCCGCACATCAACAGGCACGCGCCGCCCTCGCAACACGAGTGTCGAAAGGGCCGATCTTGCGAACCAAAGTGAATGAAATCGGAGTGGTTGATCTATAGCGCCGCAGGTCAAGAAGC # Right flank : CACGATCAGCCCCAGCAGGGTGCCCAGAGTGGCCTGCTCCGGCCTCGGGCCAACCCGCCGTTCGCCCGAATGAGGCGTCAGCTTGTACGGGGCAAGTTCGTTGCCCAGCTCGTCCCCGCGGTAGGTGCAACCGATCCCGATTCCATCCAGGTGGTCAAGGATTCCAGTACGTCGTGAACGTCGCCGATGCCCATCTTGTATTGCACCGCCTTGCCGCCCTGCTCGGTGAATGCAGCGCAGTTGTCAGCACGGTCGTCGATCAGTGCAGCGTCCGCGAAGGTAAGGCCGTGTTCCGCAAGCCAGGGCCCGAAGAAGCGTTGAGGGACTTCGGCCTTTAATGCTGCGACTTCGCTGGAACAGATGATGTCGTCGAGAATGACCGCCCAGTCCGCCAGTGTCTCGGACTGGGGGGTAGGGCGACGCCTCTTGGCCCGCGCTCGGTCGAACGTCCGCAGAAAGCAGTCCATATTGTCAGTCGCCAAGACAACCAGGACATGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], // Array 2 167429-164902 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMWI01000002.1 Micromonospora maris strain NRRL B-24793 VAB18032circular_genomeb, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 167428 28 100.0 33 ............................ GGATCCGGACGACCCGGCCACCGAGCACGTCAT 167367 28 100.0 33 ............................ CCCCCTGGTCGGCAATCTGGACTGGCAGGCCGC 167306 28 100.0 33 ............................ CGGAGCACCCCCCTGATGGAGCAGTCCGAGCTG 167245 28 100.0 33 ............................ TGGCGCACGATCAGCGGCATGAGCCAGCGGGAC 167184 28 100.0 33 ............................ CTCAAATCGCGTGGCGTTAACGTTACCGATCTC 167123 28 100.0 30 ............................ CTGGTGTCGTCGTCGCGGATCACCGTGCCG 167065 28 100.0 33 ............................ CGCGTGAGCGTGAGCAGCAGGCATGGGCCGGTC 167004 28 100.0 33 ............................ CTCCATGTGGGTGTCGCCGTAGATGTGCAGCGG 166943 28 100.0 33 ............................ CCAGCCCACCGCTGGACGCTCACCATCGATGGT 166882 28 100.0 33 ............................ GTCTCCGGTGGCGTGCGTCGCCAGAATGCGCCG 166821 28 100.0 33 ............................ CGTGGACCCGCCTGGACGAGCTGTTCGCCCGCA 166760 28 100.0 33 ............................ CTCCGCGTGGTCCCATTCGCTGCTCACGTGCAA 166699 28 92.9 36 ..........................GA TCCCATGAGGCTGCCGGCGATGTTGAGGCCGAGCGG 166635 28 100.0 33 ............................ CTGGAAGTGGTTCATCATCGGCGCGGCGGCCGG 166574 28 100.0 33 ............................ CATGTCGAAGACGGCGCCTTCGGCCTGGACCCA 166513 28 100.0 33 ............................ AGTGCCCGGACGATGGCCACGAACAGCCGGTCC 166452 28 100.0 33 ............................ CAACTCGCCGAACAGTCCGGTGTCAGCGTCGAA 166391 28 100.0 33 ............................ CGTCGAGCCTGTCAACGCAGGTGGTGACCTGAG 166330 28 100.0 33 ............................ GCGTGGCTGCGGTTGCAGCCGCCCGCCCCCACC 166269 28 100.0 33 ............................ GGACGTGGAGTCGAGGAGGGCGTCTGCGTCGCC 166208 28 100.0 33 ............................ CCAGGTCTCGGCGAGCACGGCGTGGACCGACCA 166147 28 100.0 33 ............................ CCTGGACTACGGGGTGCACGAGCTGCACCGCGA 166086 28 100.0 33 ............................ CCGCTCGCCGGCGTCGGTGACGACTACGAGCCC 166025 28 100.0 33 ............................ GTTCGGGGTGTCGTTCTTCGCGAGGCTCGGCCC 165964 28 100.0 33 ............................ CACCGGATCCGTCTCAGCGCGCATCTTCGCCGC 165903 28 100.0 33 ............................ GAAAGAGCCGGTGAAGCGTTCCTCTCGGAAGGC 165842 28 100.0 33 ............................ CACTCCGTCGGCTAGACAGGCGGGGGGAGCCCG 165781 28 100.0 33 ............................ GTGGCTTACCGGCGTGACGACGCTCGCCATCGT 165720 28 100.0 33 ............................ CGACGACTTCGCCGCGTCGGCGGTGGACTCCAC 165659 28 100.0 33 ............................ CTGGTGGCTGCTGCGCCGCGAGACCGGCAAGCC 165598 28 100.0 33 ............................ CGTGCCAGGGTTCGCCGTGCCACGTCGCACGAC 165537 28 100.0 33 ............................ CGAGCCGCCCCGGATCGCCGCGAGCGCCTCGGC 165476 28 100.0 33 ............................ CCGTCCATAGAACCGTCCACTCCGCCGCGAGCG 165415 28 100.0 33 ............................ TTCGCCGTAGTGCTCTGCGCCTTCGCGCATCAC 165354 28 100.0 33 ............................ TTCGCCGTAGTGCTCTGCGCCTTCGCGCATCAC 165293 28 100.0 33 ............................ CACTGTGAGCAGTTGCCGACCAACAGCCTCGTT 165232 27 96.4 32 .................-.......... CTGCGGTCGCTGGCCTCCGACCCGTAGGCCCC 165173 28 92.9 33 ..............T.........T... CTCCCGCTCCAACTGCACCGCCGCATCCGGACC 165112 28 100.0 33 ............................ CTGCCGGGCGCAGGCCGCCGCGTCGTCGCAGCC 165051 28 100.0 33 ............................ GGCCCGAGCCGCCGCCCCCGCCGGATCCGTCGT 164990 28 100.0 33 ............................ CTACCAGCTGGGTGACCTCGTGGCAGTCGAGGC 164929 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ==================================== ================== 42 28 99.6 33 CTGCTCCCCGCGCACGCGGGGGTGATCC # Left flank : CCATCGTGTCCCGCTCCCCTACCAGTAGAACACCCGTCACCAAGGGAGCGGCGCGCTCCTACCCATCGCTACCCGCCACAGGCATGGGGGTTCATGTCGGTGGGGCAACACAAACCAAAACCCAACCGGGCCCGACGCTGTCGACGTCGATCCCGTTGGTCTAGCGGCCGATCGTTGGCGGTGTTCCACTCTCGACACCTACGTGGTGGAGGCAGTAACCGGGGGGCGCTGTCGGCGCACAGCGTCGGCATTCCCGTCCCATGGTTGCCCTCCGTATATGCGATCGTCGGGCACCCTGTCTACACACCACATCGACCGCTCCGGGACGGCCACCATGTCGCCCTCGACGACGAGCCGTTCGACGCTCCCCAGAACCGCTACGCTGGACCCCGGCTACCAGCAGGCGACCGGACACATAACCCCACAGGAAGCAAGAGGATCTTGCAAGTGAAGTAAAGAAAATCAGCTCACTTGATCTCTAGAACCACAGGTCAGGAAGT # Right flank : CAGGCCGTGGACCCAGGGCCCGGCCGACTGTCGGCGCCGCGTGGAACTGGCTATGGCACACATTCTGGGAGTCGCGTTCGTCGGGGTTCGGGTTGGGTGCCCGGGGTGAGGACCATCTCGGCGTTGTTTCCGCATCTGATCGGCCTGCGGCTGGAAGCGGTGGTGGTCCGGGCGTCGGAGTCAGGATTGCGGCGGCGTCGCGGACAGCGCGGGCCTCGTGCGTGGCCTGTGGGACCTGGTCGGGCAGTGTGCATCGTCGCTATATACGGCGGCTGGCCGACGTCAGGTTGGGCGGCCACGAGGTGCTGCTGGCGTTGACGGTCCGCCAGTTTAACTGCGTCGATAATGGATGCCGGCGACGGACGTTCGTTGAGCAGGTACCCGGGCTCACACGTCGGTATGCCCGTCCCACGGTCCTGGCGGCCGGTGACCTGCAAGCGGTCGAGTTCATCTGGGGCTGTCTTCTTCGCCTGGTTTCGGGATCGCCACCGAGGTGTGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], //