Array 1 28951-26463 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPLJ01000106.1 Moritella viscosa isolate MT 2528, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 28950 28 100.0 32 ............................ ACTTAGGCTGTTGAGTAACTGCTTTATTTCAG 28890 28 100.0 32 ............................ ACATCAATACCTAGCATATCGCCCTGGCTATT 28830 28 100.0 32 ............................ TGCAAGCTATTCAAGCCGGCAATCAACTTACC 28770 28 100.0 32 ............................ TTTAGTTAAGTTACAATTAAGCTTTTGATTTT 28710 28 100.0 32 ............................ ACTAATTCAACGGGCGCATCATCGCGCATTTT 28650 28 100.0 32 ............................ CTAAAGAAAAAGAAATCAGAGATAAGTTAAGA 28590 28 100.0 32 ............................ GTTGAACGATGTCCATATGCACTTTGAGCACA 28530 28 100.0 32 ............................ TTTATGTAAAAGACCACGGCCAAGGCGGTGAA 28470 28 100.0 32 ............................ GTACCCGTACTTTGTGTAATACTTTACTTTCA 28410 28 100.0 32 ............................ ATTGTAGATAACAAGCGTTACAGGACCACAAT 28350 28 100.0 32 ............................ TTTAAACTGAGTCGACGCTATGATGTCAACTT 28290 28 100.0 32 ............................ CAAGACAAACCAGCTACTCTAGCTCGAGGTCT 28230 28 100.0 32 ............................ AAATGTCCAATCATCACCAGCAGCAAATGCTG 28170 28 100.0 32 ............................ GCAGCGGGTGGCTCTTCAAAAATGATGCAAGG 28110 28 100.0 32 ............................ GCCGCAAAAAACATTATTTTATCAACCAAAAT 28050 28 100.0 32 ............................ AAGCCCAAACGATGAAAACGCACATTACGAAC 27990 28 100.0 32 ............................ TTGTTAAAATAAAACACGGTGAACTCGAAACC 27930 28 100.0 32 ............................ AGACAGTTGTTTACGCAGAGGCATTGGTTGTA 27870 28 100.0 32 ............................ ACGCATGGCCGTTGCAGTCCATGGCGATAGCA 27810 28 100.0 32 ............................ CAATCAACAATGCTTGGAGGTGTTAATTTTGG 27750 28 100.0 32 ............................ ATTGCCGTTTAGAACCGTACCATCAGGACAAA 27690 28 100.0 32 ............................ TCAAAATTGAAGAGCGGAAACTTCTGAGTTTG 27630 28 100.0 32 ............................ AAGCAAGAAACAGGTGCTAGCGAACATGATGC 27570 28 100.0 32 ............................ ATCAATGACAACTATTAAATCTCTAACATCTT 27510 28 100.0 32 ............................ ATATCCAAACTGACAATGCCCACCAAAAATAA 27450 28 100.0 32 ............................ TGTTTGCAATACTGGAACAGGCAAACAGGCCA 27390 28 100.0 32 ............................ ACTCAAAGTGAAAATGATTCGATTAGCTGGTG 27330 28 100.0 32 ............................ ACTTAAAGCAGCGAAAGCGCTGGTGCTTGAAG 27270 28 100.0 32 ............................ ATAATCGACAGCCCACGTTTCACCCCGCTCAC 27210 28 100.0 32 ............................ AGACGGTAGACATAACGTTGAGCGGCAGACCT 27150 28 100.0 32 ............................ AGTGTGAGAATGCTCAATCACAGCAGATATGA 27090 28 100.0 32 ............................ ATCTACAGTACCGCCAAAACAAACCGAGCAAG 27030 28 100.0 32 ............................ TCCCACGGCATTCCCGTTGATGATGCGTGTGC 26970 28 100.0 32 ............................ AACAAAACAGGGAGTAACAACATTACAAGAAT 26910 28 100.0 32 ............................ GTGAACAAATTAGAGCGCAACGAGATATTGAC 26850 28 100.0 32 ............................ ATGGGAAACTATACACTACTAAAGAAGTGCGC 26790 28 100.0 32 ............................ AGTTTGACCAAGGTATTCAAATAATTCACTTT 26730 28 100.0 32 ............................ TATTAATCCAAATGTTACGCATTCCAAAGAGC 26670 28 100.0 32 ............................ AGCCGTCACCGTGTAGCATTAACGAATTTCTT 26610 28 100.0 32 ............................ CGTAGATGAAATATTAGAGATTGGTAATTCAA 26550 28 100.0 32 ............................ CACCGTTTCGTGATTCGCTTCGGTAATGCTGA 26490 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 42 28 100.0 32 GTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : TTATTGAATGTTGGTAAATGGTTGAAGCGATTGGCGGATTATGTGCATTGCACATCGATCAAAGATGTTCCTGATACTGTTTCATCGTTTACATGCTTTAATCGTTTTCAAGTTGCACCGAATAAAGAGCGTATAGCGCGTCGTAGAGTTAAGCGCCATGGTGGTACATTGGATGAAGCGCTTGCATATTTTGAAAACTATGAAGAGCAATTATCAAAATTGCCTTTTATTAATATGAATAGTTTGTCTGAAAGTAAAAAGTTTAAACTGTTTGTGAATAAGATTGATGTTAGTGGTCAATGTAATGGTGATTTTGATTGTTATGGGTTGAGTAAGGTTGCAACAGTACCTTTATTTTAACCATTTTTACCAATGAAAATTGTTCTTTAACAAGGTGCATTAAAAATCAATAGGTTACAACTTCATTTGAAAACATTGGTAAAAACACCAAAAAGTTATTAAGTGATTGTTGTAACTTATTATTTTACTGATAGTCTATT # Right flank : GTACTGTGATATATAACGGCGATCAACTGGTTTGATTGGCGCTATTCTTGCGTACCCTATTTATAATATAATAGGTATTAGCTCAAGCGATTGCTAATGCAGTCGTTGATGAGATCACTGCTAGTGCGGAAGTTTGCGTGACAGGTGGGAGTTCACAGGGACAGTATAAGGTAAGTTAAAAGACAGTGTAAACCATCGCCACTCTATCGCCATTTTTATTTTCAATAGCTTTAAGTTACTGATTTTAAATTGTTTTGTTTGTGTTTATATTGAAACCGGTAATATAAACAGTGAAGGGCACTACACTTGGATAGATATTGAATTAGCTTAATTTATCGTGTTGTAACTAACTTGTTCTAACTCAGTTATCGGATACAAGTGAGTTACAACTTAAGCTTCAAAGCTGTCGGTTAGAATGACTGAAGTATGGAAAAATTAACACCGCCAGAACGAACAAAAGTAAACTGTTTACAGCATTAAGCCTTTTCATTAAGGAAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //