Array 1 13284-14501 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVGT01000011.1 Streptococcus equi subsp. zooepidemicus strain INFECT6047_SEZ NODE_11_length_64950_cov_47.0224, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================== ================== 13284 26 100.0 40 .......................... AGGATTGGTCGCATCGCCACACATGAGTCGATGTGTCTCG 13350 26 100.0 41 .......................... AGGGAGGTTTATCTATGATTTATCTCTTTGATAAGGTCTCG 13417 26 100.0 41 .......................... TAGTCAGTCTCCGCTAAGGCAGGAGACAAGCCCAGGTCTCG 13484 26 100.0 41 .......................... ATGGTTATTAAGCCAAAAGGGGCTAAAAAGACCAAGTCTCG 13551 26 100.0 41 .......................... ATTAAGACGCATGTAAATCCTGATAGTAATACTGCGTCTCG 13618 26 100.0 39 .......................... ATTCCATAAATTAGCAACAGGGTACCAACCAATGTCTCG 13683 26 100.0 41 .......................... GTCAATGGCGATAGGATCGTTATTTCCAAATGCTTGTCTCG 13750 26 100.0 39 .......................... TTTGGCAGCTGTCATCCCTTTATACTGATCAAAGTCTCG 13815 26 100.0 41 .......................... ACTTTGTAGATTGATCAATGCAGTTCTAGCAGCTTGTCTCG 13882 26 100.0 42 .......................... AGTCACAACCTCCCACGATCTCACAGACTCATGCGGGTCTCG 13950 26 100.0 40 .......................... AATTTCAATGGAAATGATTGCCTTATTACACGCTGTCTCG 14016 26 100.0 39 .......................... CATTAAAACAACCGCATCTGCAAGGATTGCTTCGTCTCG 14081 26 100.0 40 .......................... GGTAGTCACTGGCGTTGAACCATCAAACAAAGCAGTCTCG 14147 26 100.0 39 .......................... GAAGTTGAAATTGTCGAAAGGTACTTGAATCTCGTCTCG 14212 26 76.9 41 ..TTTC.T.......C.......... GATTGCTTTTGGAGTAAAACCGATCGGCTTAGCTTGTCTCG 14279 26 80.8 41 ..TTTC.T.................. GTTTGAATCAGAAACACGTGATACAAAGCTTGGACGTCTCG 14346 26 76.9 40 ..TTTC.T.......C.......... CTGAAATTGCCCCTGCTGAAAACATGAAATTAAGGTCTCG 14412 26 80.8 37 ..TTTC.T.................. GCGATACGTGCCTTTACGATGTTGCGACTCCGTCTCG T [14436] 14476 26 61.5 0 ...TT.GT...T.C....T.C.T.T. | ========== ====== ====== ====== ========================== ========================================== ================== 19 26 93.5 40 CCCCATACGGGCGAGTGGATTGAAAT # Left flank : TATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACAGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACACTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGAGTCACTCATAAAATGCTAGGAGACTCGCGCTAAAATAAGCTAAAAAATAAAGAAATGGGAGGTTATAGCTAAATATGTTATTAGCTAGCCTGTGTCATTTCTCTATAAACTGTGCTATACTGCGCAGTCTCG # Right flank : TCTTTGTTTTTCATGAAGGGGTAAATCATATTGTATTCATCAAGCTGATTTATGCTTTTTATGGTGTTATGTCAAATAGATAAGAACCAATCTGAGGTTGTTGCAACAGGATTGGTTTTTTCTTGTGATTGCATATCAGACTTTTCAAAAGAACAAGCATATCATCTCAGTTGGGCTGGTGCTTGATAGCTCCTGAGCTCTTATTTATATAGCTGGTAGGATGTTGCTGATGGCTTGGTAAAGCATATCGTATCAAATTCAAGTTTTTTCATGTCACTGTCTATAGTTTGTCCGCCCTACTTTGGGTAGAATGGAGATAACTTAAGAGAGGAGTTTATTATGGAATTAACGATGCTTTTGATGGTTTCAGTTTTCATTGCAGGGCTGTTATCATTCTTTTCCCCTTGTATCTTTCCAGTTCTGCCGGTTTATTTAGGCATTTTGTTAGATTCTGATGATTCTAGGTCTATTACTATTTTTGGCAAGAAACTATATTGGTA # Questionable array : NO Score: 8.94 # Score Detail : 1:0, 2:3, 3:3, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCATACGGGCGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCCCATACGGGCGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-33] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //