Array 1 53296-54185 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LKKW01000003.1 Streptobacillus ratti strain OGS16 OGS16_S19CLC_contig_2, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=================================	=================================	==================
     53296	    33	 100.0	    33	.................................	ATGGAATGTATGCCGTAGATGAATTGTTAGGAT	
     53362	    33	 100.0	    33	.................................	TTAAATTAAATAATATAAATCGTGAAATTAGAT	
     53428	    33	 100.0	    33	.................................	CTTAATTTACTTTAAATTAATGAATAGCCTGAT	
     53494	    33	 100.0	    32	.................................	TCTTGATTGTATCGCCTTATCTTCTCTTAGAT 	
     53559	    33	 100.0	    33	.................................	TTCTGTATTTTTATAATAATATATTAAATTGAT	
     53625	    33	 100.0	    33	.................................	CTAAAGTAAATAATAATATTGAGATTGATTGAT	
     53691	    33	 100.0	    33	.................................	AAAGTAAAAAGACAAGTTCAAGTAGTATCAGAT	
     53757	    33	 100.0	    33	.................................	ATGATAATGATATTGAAGTTGAATATGTAGGAT	
     53823	    33	 100.0	    33	.................................	ACATTAAAAGAAAGAACGATAAATATACCTGAT	
     53889	    33	 100.0	    33	.................................	AAACAAATGTGAACTACAAGCAAATTTATTGAT	
     53955	    33	 100.0	    33	.................................	ATTTTCTTCTGTTTTTTCTAAATTCCATTTTAT	
     54021	    33	 100.0	    33	.................................	TTCTGCATTTTTATAATAGTATATTAAATTGAT	
     54087	    33	 100.0	    33	.................................	TATTCTTATGGGACAAAACGGAGATAATGCGAT	
     54153	    33	  97.0	     0	..........A......................	|                                	
==========	======	======	======	=================================	=================================	==================
        14	    33	  99.8	    33	ATAGATTCTTGATAAATTTGAATAATGTGAATG	                                 	       

# Left flank :   AGCTATTTGAAATTTTTAGAAGAAGGTGATAGAGTACTGGCTATACCTGAAATAATAAAAATAGATTTTTATGATCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTATTTTGATTTACCAGTATTAACTAAATTAGAAAGAAAACAAGCTCAAGATTTTAGAAAAAATTTATTAAATGAAGGTTTCATTATGATGCAATTTTCTTGTTATTCAAGATTTTGCAGAAATGATGCTGAATGTTCAAAATATTTTAGTAGAATAAAGAAATTAAGTAATAAATTGAGTGGTGGAGAAATAAGGATTTTAAAAATTACTAATAAACAATATGAAAATATGTTAGTATTAGTAAAAGAACCTAAATTATCTGAAATAAAGATTTCAAAAAATCCGTTAGTTATTTTTTAATGTGAATTTTGTACTAATGGATTGATTATTTAAATTGTCAACTGTATCTTCTATTAATGGAAATGTATTAATTTCATTAATAGAGGAT
# Right flank :  GAAGTGAAGAACTTAACTATCTAGCTAGTTTGATATATATTCTTGATAAATTTGAATAATGTGANNAAATTTGAATAATGTGAATAAAGATGGTTTCACTCTATGTTGAATATAGAGATAAATCCTTTTGTGTAAATTTAAATAAGATATTACTAATATAGGAGATATTTATGAATGTTTTGATGTATTTTAGAGATGAATACTCTAATTTTTCTTTTGATAATCATATATTTATTGCTGGTGGTAATGGTACTGGTAAGACTTCTATGTATAATTACATATTATCTGGTTTTGACGGTAAAGAAAAAGATATGTTTTTAGTTGACGGTTTAAAAATTAAAAAAAATCAGTTTGTTGCATTGGGAATATCGAGAGATAATACATTAGATGAAGAAATAAAATTAAGCTCTAAAACATATATTATTTCAAGACTTGAAACCTTTAGAGAATATGTTAATGAAGAAAATGTTAGAAGTTCAATGATTGAATATTTTAATTCA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATAGATTCTTGATAAATTTGAATAATGTGAATG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:78.79%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//