Array 1 5405-6289 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABY01000022.1 Edwardsiella anguillarum ET070829 22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5405 28 100.0 34 ............................ TGGACTATGAAGCGGTAGAACGCTGGGTCTGTGA 5467 28 100.0 34 ............................ CCCCGTAAGTCCATTAATGATCACAGAGCACCTA 5529 28 100.0 33 ............................ CGTTTCAAAGTCGAGGGTTTCCACCGTATCGGG 5590 28 100.0 33 ............................ CCCTGCATCGGTACATGACAAAGACTGAAGCGG 5651 28 100.0 33 ............................ TGCCTTCAATGGCCGCCGCATTCTCTTGACCAG 5712 28 100.0 33 ............................ TTCGGCCTTAGCCCTGGCAGCGGGCAACGTAGA 5773 28 100.0 33 ............................ TGTCTTATCGGTGGCACCGCCAGATGCTTCCCG 5834 28 100.0 33 ............................ CGATTGTCCCTGATGCCGCCAACTCTTTCCCAT 5895 28 100.0 33 ............................ TGGCTATGAAAACGTGTTCCCGGTGTATGGCTC 5956 28 100.0 33 ............................ TGCCGATGTATTCGACGTTGTATTTTTCGGTAA 6017 28 100.0 33 ............................ TGACTGCGTAGATAGAGCACTGTGCAGCATCGA 6078 28 100.0 34 ............................ CTACCAGCCAGCCCGGACAGGTCCAGCTTGAGGA 6140 28 100.0 33 ............................ CTCGGCCTTAGCCCTGGCAGCGGGCAACGTAGA 6201 28 100.0 33 ............................ TAGCCCGGAAGGTTGGGAGAGTACGCTATGAAA 6262 28 92.9 0 ..C........................A | ========== ====== ====== ====== ============================ ================================== ================== 15 28 99.5 33 GTTTTCCCCACGCCTGTGGGGGTGTTTC # Left flank : TTGTCGTGGCGCTTGATGAAGTACTCGGCTACAGCCTGAGAGGTGGTAACAGCTTTGCCATCGTGAATGGTTACACTGGGGGTGTGTACAGAAAGCCGATGAGTCATTTTTCTGTGTCCTACGTATATGTTCAAATTTACCCTGTGTTCAGCAGGGCGGTCGGGTACTTGAACACCGTACGTAGTCGGCCAGCAGTTTTTCCCTTACGGGTGTTGTATGGTCTGCTCGCTACCCGGCCATATCTGAAAGTATGGACACAAAAAAAACCGCATTGCTGTCGGGTGCGGAGGCCGCTACGTAAGGTGTGTTCAGCACCTGAGCGGACTATACTCCCGGCATCGCGGGTAAAACTAATTTCGATTTATGATACTTTACTTACAAATCATAGGAATTCAATGAATCATTCTAGCCTGACCATACAGAGCCCCATCTGGCTATTCGACCAGTAAACCAACCACAATCTGTAGCTGGTTTAGTATGTTCTTTAACAATATAATGGG # Right flank : AATAGGAAACTGACCGAGTCACATATCAAGGCCAATAAAACCAGGCTGCTGGCTATGTGGCAATCAGCGGCGCGATTTTGGCTATCGTGCGGGAAAATAACGCACAGCTCGGTTAAGGGCTTACTGTGCGCCGTCAAGCGCCGCCCTTCAGAGCGGGGGGATACTCACTCTCATCACTAGGATCACCACTGATGAAGGTACTGGCCTCCTGAAACGACCGGAACACAGGTCATTTAGTGATATCCATCTAACTTACTGAAATACAACTAATCGATATCAAATAAAGATCGAGGGAATCCATTATTATTAGGGAGCCCCATAGCGGTTAAATTACACCCAGGCAAACGAGGTTTATCATTATCAATAAGATCGGCAATATTTCTAATCCATTTTGAGCCAGGGCCGATTTTTTTCACCAAAAACCATAGCACAGCTATCATCCCATACATTCTTTCGTAGGCATCATCATTCATACTCAATCGCTCAAAGTATGGGTAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGCCTGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 58-389 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABY01000047.1 Edwardsiella anguillarum ET070829 47, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 58 28 100.0 33 ............................ CGACGCTTTAAGCTCTACACCGGTCGCCTGAGC 119 28 100.0 33 ............................ TGATTGATGGCTGTGTAGCGCGGTTACGTAAAT 180 28 100.0 33 ............................ CAATCGGCAACGATCCAAAATGGTTGTCATGAG 241 28 100.0 33 ............................ CGTACAAGGCGCTGTTAGCCGGAACCAAATTGC 302 28 100.0 33 ............................ TCTCACACCTATCTGTCCGGCAACATCGAGTGC 363 27 92.9 0 ................-A.......... | ========== ====== ====== ====== ============================ ================================= ================== 6 28 98.8 33 GTCTTCCCCACGTCCGTGGGGGTGTTTC # Left flank : TCCCCACGTCCGTGGGGGTGTTTCTCGTTGAGCCAGTCTTTTTCCATGTATGTGCCGG # Right flank : CCAAAAGTCAGCCAGTGAACCGTCTCGGTTTTGTGGGAGAGCGTTAAGTCCGGGAGTTCAGGCTGCCATAGCCTCGTTCCCGATGGGAGCGTAATACACTTTTTCTGCCTCAGCGGGTGGGATGTGACTCAGCCGCTCAAGCAACCGACGATTGTTGTACCAGTCCACCCACGCCAGTGTGGCCAGCGCCACTTCCTGCCAGTTTCTCCAGCTCTGTCGGTGTTTTGTACAGACCGTTGATACTTTCGGCCATGGCATTATCATAAGAGTCACCCGTACTGCCCGTTGAAGCTAGAAGCTCCGCCTCCTGTAGCCGCTGTGTGTACGCTAGCGATACGTACTATGAGCCTTTGTCGCTGTGATGAAGGGGGGCTGATGGCCGACGGGCCCACAGCGCCAGCTCCAGCGCGTCCAGTACGAACGCTGTCTCTTGGTCAGTGAAGCCTGGATCGCCAGTGGGGGTTCCGCCGGTGTCAGAAGCATCGCCACGATGGTCACTA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //