Array 1 84564-84338 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAWF01000004.1 Aliifodinibius saliphilus strain ECH52 4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================== ================== 84563 31 100.0 34 ............................... TATTAAATACTATGTATCAAAAAAAGCCAGAAAA 84498 31 100.0 34 ............................... CAGCATTCCCATCCCGTGTTGCATCTTTAGCCTT 84433 31 100.0 34 ............................... CAACTACAACGCCATCATCAATCTGAAGATACCC 84368 31 96.8 0 ..............................A | ========== ====== ====== ====== =============================== ================================== ================== 4 31 99.2 34 CTTTTAATAGCACCTTATAGGAATTGAAATC # Left flank : TGAAATTCAATAAATTATATCCATGTATTATATACTTGTTTATGACGTAAATGTAGATAGGGTGCAGAAAATGCTAAAAATTATGCGAGAGTATTTGAATCATGTTCAAAACTCAGTTTTTGAAGGGGAGCTGACCGATGCCCAGCTTGCAGAATTGAAAGACCGGGCCCGGGATTTAATGGATGAAGACGAAGATTCGATTATTATTTACCGGGTGGGCAGCAAGCGCTGGAGAAATCGAGAAGTACTGGGGATTGAAAAGCACAGCACAGATAACTTTATTTGATTGGCTTTTTGTCGTCGGCCTATCTCTTATACAACTAAATATTTTTGGTGAATGCCCTAATGAGATTGAAATCCCTGTTTACATCATTCAGGCGGTAAAATAATGGGTCGTCATGGGTATAGGGTATTTGCAAAAATAAGAGTAGACGATAAAATATTGATTTTTAGGATTCAAAGTCACAATATAGGCACTATAAACCGTGGTTCTACCACGG # Right flank : ATTTGACGATCAACGGACGATGATACATACAACCTATAACTTCCCAGCCTTAAACCTATGACTTTTGGAAAAAATGGTAGTACGGACGTATCGCAATACGTCCGTACTTGATCTATTATCGAATAAAGACAGGTTCGGTTTTGTCTTCGGTATGTTCTTCGCTGTAACTATAATCATTGCCGTTAAAACCTAGCAGGCCATCGTAGGTGCTTACGTCATTTTTGATGAGGTAACGAGCCATTGTTCCCCGGTTTTTCTTGGAATAGAAACCAATAGTCTTCAAAGTTCCGTTTTTAAAATCTTTGAATTTGGGGGTGATTACATCCACTTTTATATCGTCTGGTTGCAGGGCCTTGAAGTACTCTTTACTGGCCAGATTCACAAACAGTTCATCATCTTCAAGCTCATCATTTAACGCTTCGGTTAGACTATCGTCCCAGAAATCATAAAGACGGTCGTGACCGTTTACCTGCATCTTGGTGCCCATCTCTAAACGATAA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATAGCACCTTATAGGAATTGAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 95648-94583 **** Predicted by CRISPRDetect 2.4 *** >NZ_VAWF01000004.1 Aliifodinibius saliphilus strain ECH52 4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 95647 30 100.0 36 .............................. TATTATCAGGCTTTTCATAATATACAACAAGAATAC 95581 30 100.0 35 .............................. CAGTAATGGGAAAGACAGATGAAGCAAGCGAATAT 95516 30 100.0 36 .............................. TCCGTATAGCTGGCAACTTGTCCAGCAAATACAACG 95450 30 100.0 36 .............................. TTTGCCATTAACTTGTTTTGCCTCACAAAGAAAATA 95384 30 100.0 35 .............................. TCGTGTTTCTTGATTCGTAGAGTCACCCTGCGCTC 95319 30 100.0 36 .............................. GTGTATTCAAACGATGTAAAGAAGCCTGTCAAGTCA 95253 30 100.0 35 .............................. AGCTCTTCGGCTTTCTCCGGGAATCGCTTAGCCAG 95188 30 100.0 36 .............................. CAATATGTACAGGGTATTCCTACGGCTGGCAAGTAC 95122 30 100.0 37 .............................. GAGTTTACTCCTGATGCCCAGGAAGCGATTGAAAATA 95055 30 100.0 35 .............................. AAGATATCGGGGTCATTTCCGTTATGTCCTAAGCT 94990 30 100.0 35 .............................. TTCAGAAAGGTATTACCCTACTTCTTAGTGGTGGG 94925 30 100.0 37 .............................. TCTTGTATACGTTCTAGTAGGTTGGTGATAGCTTTTT 94858 30 100.0 35 .............................. TTAGCTATTAACTTGCCAGAAGACTCTTCAATCTC 94793 30 100.0 37 .............................. TCGTCAAAGTGTGATTGGTCAAACGGATACACGCCTA 94726 30 100.0 37 .............................. GGCTTTTTGTCATTCACCGATAATGGTGATGGTACCG 94659 30 86.7 18 ................CT.......A..G. CCGTACAAGATAAGAACC Deletion [94612] 94611 29 80.0 0 ......C.....T.....G...C.A-.... | ========== ====== ====== ====== ============================== ===================================== ================== 17 30 98.0 35 CTTTTAATAGCACCTTAGAGGAATTGAAAT # Left flank : AAGCGTTGTCTGACGAAGTGCAGGCAGACCCCGAAAATGCACGAGAGATTGGTGTTGAGTGGGCTGCACAACAGTGCACCGAACTGCTTGAAAAGGGCGTGCCCGGTATCCATTTCTACATCATGGGTGATCCTACTCCAGCACTGGATGCTGTGGATCAGTTACCCTTGGGACACGATGTGGTAAAGCGGTAAATTATAGGAGATCTTAACGCCCCGACTGAGGATTGTTTACATTCGGGGCTTTTCTTTTAGAAATGGCATTGCTGTATTCAAGAGTGGAATATTGCTGAAAGAAATCGTCGCCCCTTCTTTATATACAGAACTAACATAGATCCTGCTCTTTTTTAAAATAAAGTGGGCGTTGAACTGTTTTAAAGCCCAATTTTAGTAGTCGTCGGCCTCCCTGGAACATTACAGTACTCCATGCCGACGATTTTTTATTGCTTTTATGGGCATAAAATAGGAATATATGAACTGCAGTGGCCCATTTTGCCACGG # Right flank : CAAGATACCAATAACTAATCAACCGATCCCCTTCTTTATAAATATTTTAACTCAGTTAGATAATAAAAAGTGAGTTTGAAAATGGGGTGACAGTATGGTGTCAGTGGGACCGTTATCTTAAAATTGAAGTTAATACATCCAAGCTTACGATTTGTAATAGAAAGATAGAATACATTAATTGCTAAAAATAAGCATTAGCTTTACAGGATAGATTCAAATCAACAGAGGCATCAAGAATGTTATGAGACTACATCTGAAGCTCACTCCTAATACCGACCCTGTCCCATTCAACTATCAGCACCAGCTTACCGGGGTTCTTCATAAGTGGCTGGGCCAAAATAACCTGCATGATAAAATATCGCTGTATTCTTTTTCGTGGTTGAGGGGGGATTTTAAACAGGTTGACAAAGACCATATCACTTTTTCAAAAGGTGCAGATTGGTATATAAAATGCTGGAATGAAGATATTATTCAAGCTTTGAGAGATGGGATCAAAGATG # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATAGCACCTTAGAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA //