Array 1 10496-10101 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANPT010000026.1 Pseudomonas otitidis strain 10M NODE_73_length_76805_cov_30.8383, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10495 29 100.0 32 ............................. GCCATCGCCGACAGCTACCCGTGGCAGAAGCG 10434 29 100.0 32 ............................. GCGGACGTCGTACTTCATCGCGTAGCGGTCGA 10373 29 100.0 32 ............................. TGTTGTGGGAATGGGGGATTGATACAGAAGAT 10312 29 100.0 32 ............................. GCGCGGGCCGAAGTCGCCGCCCAGGCGGTCGA 10251 29 100.0 32 ............................. CGCGGTAAGCGCCGCGAGGACACCACCCTCGA 10190 29 93.1 32 .........................T..A GAAGAGCCAACCAGACTGCCGAAGGTCGAAGC 10129 29 72.4 0 C.........AAAA...........G.GT | ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.1 32 GTGTTCCCCACGGGCGTGGGGATGAACCG # Left flank : GGGTCGCATCATCCCGCTGATCGAAGAGGTGCTCGCAGCCGGCGGTATCCACCCGCCCGAGGCGCCGCCGGAGTCCGTACCGCCGGCCATCCCCAACCCCGACAGCCCCGGCGATGCCGGCCACCGGAGCCGGTGATGGCCTTTCTCACCGTGGTCACCGAGAACGTCCCGCCACGCCTGCGCGGGCGCCTGGCCATCTGGCTGCTGGAGGTGCGCGCGGGGGTGTACATCGGCGACGTCTCGCGGCGCACCCGGGAAATGATCTGGCAGCAGCTCGAAGCCGGGTACGAGGACGGCAGTGTGGTCATGGCCTGGGCCAGCCAGAACGAGTCCGGCTACGACTTCCAGACCCTCGGCAGCAACCGCCGCGAACCGGTGGACCACGACGGCCTGCGGCTGGTGGCCTTCCTGCCACCGACCACCGCAGATTCCACACCCAAATAATCGGTAGATTTTCAGGAGGTGATTTTTATCTTTGAGAACAAGGGGTTGCAGTTGGT # Right flank : CGCGACCCTACCGCCGCTGCCAGATCTTCCGGCCGCCCTGGTCTTCGGTCACCAGGTAGGGGGCGCTGAAGCGGTAGCGGGTGGCGGGCTGGTAGTCGGTGCCGCCGTCGGGGCGGACGAGGAGGATGCCGTCGGCGGTCTGCCATTGGCCGGCGTACTGGAGGGTGCCGTCGCTGTCGTAGCTCCAGTCGGAGCCGCCGCCGACGGAGCGGCTCCATTGCTCGACGCGGCCGTCGGGGGCGAGGTGCAGGGTGAGCACCGTGTTGAAGGAGGCGAAGCTGGCGCCACCGCTGTTGATGATGTCTTCGTGGACCCAGGTGCCGACCAGCGCCGGGTCCAGGGTGCCGGCGCCGGTGCGGGTGGCGCCTGTGGCGTGTGAGGGGCTGCGCTGGAACAGCGCCTGGCGCTCCAGCACCTGGCCGCTGACGGGGTCACGCGCGGCGAGGCGGGCGTTGAGCTGGTCGTTGCCGTAGGTGGCGGCGAGGGTGGCGATCACCTGG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5437-4920 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANPT010000030.1 Pseudomonas otitidis strain 10M NODE_85_length_65489_cov_28.0522, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5436 29 100.0 32 ............................. TCGCGCACGGTTACGGGCACGGTGCCAGTTCC 5375 29 100.0 32 ............................. GACGCCGCCGGCACTACCGTCACCGTGGACAC 5314 29 100.0 32 ............................. TTGATGACCGTCTTCTGGTCGGCGAGCTTGCC 5253 29 100.0 32 ............................. ACGAGGCACAGAAGATCATCGCTACCTACCAA 5192 29 100.0 32 ............................. TCCGGGGTGCCGGTGGCGCCGGCGTTGAGCTT 5131 29 100.0 32 ............................. GTCACCCTGATCCACTCCGGCGCCCACAAGGT 5070 29 100.0 32 ............................. ATCGCCCAGGCCAAGAGCGAGCTGCGAGGGCT 5009 29 93.1 32 ..............A..........G... GGCGGCGAGAAAGCCGGTCGCTTGGTCTACCC 4948 29 79.3 0 T............AC...........TAC | ========== ====== ====== ====== ============================= ================================ ================== 9 29 96.9 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GTGGCCGCCGACGAGATCGTCAGCGCCGGCCGGGTGTTCCGTGCCCTCTACACTACCGGCCGGGCCATGGGCATGGCCCGGCGGCTGGCCGCCACCCGCGCCAACCAGGCAGCGGAGCGCGCCACGGGGGTGGACCTGGCCGCCGAATTGGGCGCCACCCAGTGGCTCGACGGGCCCGACCTGCCCGAACCCCAGCGCCGGCAGTACGAGCTGCAGCAGCGCATCCGCGCCCACCTGGTGGCCAACAACTGGCCCGAGGGGTTCAGCGGCCAGCAACTCATCGAGGCCCTGGCACTGATCAACGACCGCGGCACACAGATGGCCGTCGGCAGCGCCCTGCAACTGCTGGGCTACAGGCGCGTGCGCATGGGCTCGGCTGGCCGACCCTATGCGTACAAGCTGACGGTGGTGCCAGCGTTGTGATGCCGAGGGCAAGCTGAGAAATCGGTAGCGAATTCGGCAGGGAATTTTCCTTTTCACGCCAGTGGTTTAGATTTGGT # Right flank : AGGCTCTGATACATTCAGAGCCTTTTGGACCAAGGAGTGGTGTGATGACGTGCAGGCAATGCGGAGCCCCCGCAACGGATGCCGACTCGGGCCTTTGCCCTGAGCATTTCGAAGAGCAGCGCCAGGCCATCGTGGGGCGGCTGAAGCAGCCCAAGCCGGTTGCCGTAGCCCCGGCGCGCCCGCGCGAGCGGGTGCCGTTGTGGGTAGCGTTGCTGCTGGTGGTGATGACGCTGGTGACCGGCATCTCGGTGGTGGGCATTCGTACCACTTCCAGCAGCCCAGGGCTCTGGACGCTGATCGCGATGGTCTGCTCGGTGCCCACGTTCCTGCTTTGGCGCTATTTCATGCGCCGCTACCCGAAGGCGCTGTGGCCGGTTGGTTTCTCGTTAGCCGGGTTGGTGCTCGTTGCTGTCATGGCCAACTGGGCCTACGTGTTTGTAACCACCCCCGCACAATCGGAGCTGGTCGGTACCCGGAGCCCCAGGGAGGCAGAGCAATCC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //