Array 1 251284-251522 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHOC02000002.1 Leptospira kirschneri serovar Valbuzzi str. 200702274 ctg7180000003501, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ============================================== ================== 251284 26 100.0 46 .......................... TCGGGTTGGGACTGAGGAGCAGAGTTATGGTTACAGTTTCAATCCA 251356 26 100.0 45 .......................... TATGGCGTTGGACGAATCTGCAATGTATCCAGAGGTTTCAATCCA 251427 26 96.2 44 .........C................ GTTGAGTCGCCATTTTCTGATTTTGTGAATACTGTTTCAATCCA 251497 26 96.2 0 .....................A.... | ========== ====== ====== ====== ========================== ============================================== ================== 4 26 98.1 45 CTTCCTCTTTAATAAGAGAAAGAAAT # Left flank : AATAGAAAACAGATGGAGAATTAATTTTTCAACAACTCTATTATATAATTATCACTCATAACTATCAATAAAGTACCTAATATTTTGCATGGAATCAGTGTTTTGCGATAAAATTAACGGTACTTAATTTTATAGAGATCAGTAGTAGAACCAAATTCCTTGCTTGGAATAAACCTACATCACAGTAATCAGATTGTATGAGTTCCCACAAACTACCTCTCATAGTCGTACTTTGTTGTAAAGTTTAACAATGGTTTATTAAATCTATAAAATGTAGTAGTTCCTACATTTTTTCAGTAGAGCTTAAATCGTTCTCTCGCAATTTTTTACGAAGAAATTCAGTTTTATAAAATAAATATCTAGAATTTAAATCACGTTATATGAATTAGAATTTTATAATTGAATATCTAGGATTTCTCTTTAAGAGAAAACTTTTATAAAGAGGTCGCCTTAAAACCTAAAATAAAATTTTTTTTTAAATAAATCGTTTTTTTGACAAC # Right flank : TAGCGGCCGAAAAGGTGCAAATTTATGGATTAGAAAAAGCTTTATTGAGCTTTCTAGACATAATAATTGCGAACCGAATCGGAGCATACCATACAAATACTAAGTAAAACCGTCAAATCGACTAACGTAGACCAAAGGTTTAAACGCGAACCGGCCGCAAAGGATCGGGAAAAACAGGTTCGCAAAAAGTGTTATATCATAAAAGGATCGGCCCTTAAAAGTCAAGAATATCCTGAAACTAAAAACCGCTTAATTTATGCAAAGATAGGGTTTTCTATAAAAACAAATAAAAAATGTTGTTCAACTAAATATGTTCTTTACTGATTGTTGTATTTTAAAAATATATTAATCACAAATATGGCATTTTTATAAAATTCTTATTATACGTTTAGGTATTTTGAATGGCGACTAACTATATACGATTCAAAAAAAAGAATTCGATTCAATGGGGAAAAATCGAAGAAGATAAAATTCTAACTTTGGACTGTGATAATCTTTCT # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCTTTAATAAGAGAAAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.08%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 243-421 **** Predicted by CRISPRDetect 2.4 *** >NZ_AHOC02000013.1 Leptospira kirschneri serovar Valbuzzi str. 200702274 ctg7180000003489, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 243 36 100.0 37 .................................... CCTCAGTTACAAACTCTAAATCTTTCCGAAAAATTTG 316 36 97.2 34 ...................T................ CAATCGGATCAACATATTTGTAAATTACGACAAC 386 36 80.6 0 ..........................AAAGGAC... | ========== ====== ====== ====== ==================================== ===================================== ================== 3 36 92.6 36 GTTCTTTCTCTTCTTTAAAAGGAGAGTGGATTGAAA # Left flank : TCTTTCTTTAACTATATTATAGATTTTTAAAAGCCGATCATTTATAATGAAAACGCTTCTGCGAACCTGTTTCTCCCGATCAATCACGAACCTTTCGCACCCTTGTATTGATTCTCTGTTTGGCGATTGAACGGTTTCGCTTAGCATTTGTTCAGCATGGCAAAAGTAGGTTCGCAATTATTATGTCTATAAAAGCCAATAAAGCTTTTATAATATATAATTTTTCTACCTATCAAGCCGCTG # Right flank : ATTGAAGCCAATCTAGAATATAGTTGTTGAAAAATGAATTCTCCATCTGTTTCTATTTCATGGAAACGAGCAATTGAAATAGTTTTGTTAAACGCCACTATGGAATTTTTCAACAACTATAATTTTGAAAAAAGTTGGGATCTGGACTTTGTAGATCGATTCTTTAAATGTAGGAACTACTGCAAAATTTCGTTCGGAAAAGTATGATTTAAAATGGCAAAAAAGATAAAAAGAGACGTAATCTGTAGGAACTACCACAATTTAAAAAATAGAAGTTTATAACTTATCGTATTCAAGTGTGGAACTACTGGTAAATCCACGATTTGTATGAGTTCCCACATTTTTGAGACCAGAAATAGGAAAGGTTTAGTGGCTTCTATCCTCTGGACGCGAAATCGATACGAGGGAATTTTAGCAGAACGTTCTCTCAAATAAAAGACGAGATATTGTATTAGGTTTCTTTTATGAAATTTATTGACTGGAGCCAAAAGTACGGTCCT # Questionable array : NO Score: 3.80 # Score Detail : 1:0, 2:0, 3:3, 4:0.63, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTTCTCTTCTTTAAAAGGAGAGTGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //