Array 1 1784-23 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAIE01000030.1 Methanobrevibacter sp. A54 contig_153, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 1783 31 100.0 34 ............................... GTATTACTTGTACCATGTAAATTCAACACTACTT 1718 31 100.0 34 ............................... ATACGAAACCAATAATTGCTACAAGCACTGCGAT 1653 31 100.0 32 ............................... ATAACTCCAGTAATTGTACTATATGCAGGAAT 1590 31 100.0 36 ............................... TACCATACTTCCGCATTAACATCATAATATCTAAAT 1523 31 100.0 36 ............................... TTTACTTTTTCAGTTTTTCTTATTTCTACTACTAAA 1456 31 100.0 34 ............................... AAAGGTAGAAAAACTTTACCTTGTTTGTAACCAA 1391 31 100.0 36 ............................... TCGTATAAAGGAACTTCTACTTATACTACTGCAACT 1324 31 100.0 35 ............................... GGAAATGATTAGTAAATCCATCACAGATACCTTTG 1258 31 100.0 33 ............................... TACTATGAAGAACCAGGATACACTGATTTTAGA 1194 31 100.0 36 ............................... TTATGACAATGAGTAATAGTACAAGATTTATTAATA 1127 31 100.0 38 ............................... ACAGGTTAGCGATTATCCTAACGCAATGCAATTAGAAT 1058 31 100.0 35 ............................... CGAATAATAATGGACAAGCATTATTCACATATACA 992 31 100.0 35 ............................... ATTAACATCAGACAATGCTCCCATTGCTTTTCCTA 926 31 100.0 36 ............................... CAACTAAAAACGGGATTGTAGAAGGCAACTGTATTG 859 31 100.0 36 ............................... ATGTACTGGATACTAATTCTGATATGCCTTTCAGTA 792 31 100.0 35 ............................... CTGGCAGTCGTGACCCTGTAGGTTACAAAGGAGGT 726 31 100.0 37 ............................... AGAATTAACCTTGCAGTGTCCACAGCTTTTGCAACTA 658 31 100.0 37 ............................... TCTGTCGGATTCACTGGTCATAGTATCATAAACTAAA 590 31 100.0 36 ............................... AACATTAAAAGTACATGCAGGACAATGCATGTACAA 523 31 100.0 36 ............................... CTTGTAAACTTTTAACACCATTGGCCATATTAGTAA 456 31 100.0 37 ............................... TGGAGTGAAGATGACATTAGAATGTTAAGACGTGATG 388 31 100.0 36 ............................... GAAGTTTACAAGATTTTAATTTTGATTGCAGGAGCA 321 31 100.0 36 ............................... AAAACTATTGAAATGGAAATTGAGGTTGGTGAATGT 254 31 100.0 36 ............................... ACACATTCAACATAACTGAAGAAGAACTACATCAAA 187 31 100.0 36 ............................... TATATTACTTTATACCGTCTACTATATAAATATATT 120 31 100.0 36 ............................... TGGATTATTAGATATTCCAGCACCATTTAAACCAGT 53 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 27 31 100.0 36 GTTAAAAATAAGACTATAATAGGATTGAAAT # Left flank : GCTTTGTTTATCTCATGTTTTATTTTTTGATTATTTTTTAGCTATTTAAAAAATTTTATTTTTTGATTTTTTTTTTAAGTTTTATTTATTTAAATGGGATACTTCTCTTTTAAATAGGTTGATATTTTATTTTATAAATTTCTAAGTTTTATTTTTTATTTTCAATTATTTTGTCTTCTTTGTTGATACATATAAATAAAAAACATTTTTTATAATCAACAAATTTAAGTGCATGAATAAATAAATTATAAATTGGTTTTGCCCGTTTTGAGAAAAAATGTGGCC # Right flank : TACGAGGAAACAAATCTTGTTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAAATAAGACTATAATAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 51-1009 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAIE01000084.1 Methanobrevibacter sp. A54 contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 51 31 100.0 34 ............................... TAGTCAGGTTTATTGCTTGAATGGTTTTTTGTAG 116 31 100.0 36 ............................... AATATATAATTTGTAATGGCAAATGTTTTAACTGTC 183 31 100.0 35 ............................... TATGAAAGGTGTTTTTATGATGTCAGATGTATTAG 249 31 100.0 36 ............................... TTAGTTACGTAAATGATTTATTATTAAACGACACAG 316 31 100.0 37 ............................... ATCAGTGAAGTGATTTATAAAAGGAATGATTTAGATA 384 31 100.0 34 ............................... TAGTCAGGTTTATTGCTTGAATGGTTTTTTGTAG 449 31 100.0 35 ............................... AATATTCATATAAATGAAAATGGTATGATGGTGAT 515 31 100.0 33 ............................... GATGGTATTAAAACAAAATTGTCCAAAATAGGA 579 31 100.0 34 ............................... GTAGGTATTTCTTTAACTGTGATTTCTAATTCAA 644 31 100.0 35 ............................... TGAGCAATATAAGGATCACTGTTTCTTTTGTGAGT 710 31 100.0 36 ............................... CAAGAAAGTCATCTTAAGTCTACAGCATCATATAAT 777 31 100.0 37 ............................... TACACATGATAAAGTAATCATGGAAAATGATAACCTG 845 31 100.0 36 ............................... TGTACTGCATATCCATTCTCCAATAAAACATCATCT 912 31 100.0 36 ............................... GCTGGATTTGCACAATTATATAAACTTAGGTCAACT 979 31 96.8 0 ..........................T.... | ========== ====== ====== ====== =============================== ===================================== ================== 15 31 99.8 35 GTTAAAAATAAGACTATAATAGGATTGAAAT # Left flank : ATAGGATTGAAATATCAGTGAAGTGATTTATAAAAGGAATGATTTAGATAG # Right flank : TCTTAATATCTTTTAAAAACTTGGATGTAATCAGTTAAAATAATGCACTATGAATTGAAATAATCAAATGTTTACTTTGTACTATCATTATTTTTTTAAACTCCAAAATTTAATATTAAATCATGTGTTCAATAGTTGGTCTTCAAGGTAATTTCAAAGCTGATGATTTAATAGCTATGTTAAAAACATCAAAAAATAGGGGAAAAGATGCTTCAGGAATATTTTTAGATGGTAAAATACAAAAAGGTATTGATTTAAATGATTTCAATGATAAAAACGCTTATTATTTAGGTTTAGGCCATAATCTGCTGGCTGTCCATAATTTGGAAAACAGAACTTCCCATACTCAGCCGATAGCTAAAAACACTCTGACTCTGGTTTTCAATGGTGAGATTTATAATTATTCTTCCCTAAAGAATTTGCTGGCTAAACTGACAAAAAATGACAATATAAATTCTGATTCTGAGTTATTAATTAATCTGATTGATTTTTATTATAAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAAATAAGACTATAATAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //