Array 1 6011-6578 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEBP01000004.1 Salinivibrio sp. DV, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6011 28 100.0 32 ............................ TGAAATAATCATGTTTGGGTTCCTTTGTTCAT 6071 28 100.0 32 ............................ GCTCATTGCACTGTTCGCTTCGCCCTTCATGA 6131 28 100.0 32 ............................ ATCACCACGCTGACACCTAAAACCCTGACGGT 6191 28 100.0 32 ............................ GAGTACGGCGACAACATCACGCTAGAAGTGGA 6251 28 100.0 32 ............................ GGGCATTGGCACCGCTATTGGTGGGTTAATCG 6311 28 100.0 32 ............................ CGCACAAAAAGAAATGAAAGCGGCGCTAACGG 6371 28 100.0 32 ............................ TTTCTAAAAGTCAGCCCGGTGTTTTGCCTGTT 6431 28 100.0 32 ............................ TACGAGTCACTATTGTAGCTGACCAAACATTT 6491 28 100.0 32 ............................ CACTGCGTCATAAATGCCTTTGATTGCTGCTT 6551 28 85.7 0 .....................G...GTG | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TGCAAGACTATGCTTACTTCAAACGTTGGAACTACAAATCGCCGCAGCGACTTTATAAAAACCTCGACCGGCGTGCGGCCGCGATTGCCAGCAAAAATGGTTACGATGAGGAGGAGGTAAAGCGTCGTTTGTTGGAAAACATCAAAACCGACGACAAACGCTGGTCGCTGCCTTTTATTCAAGTCACCAGCCTGTCGAGCCAAAAACGAGCAGGGCAGCTAAATACCGAGTTTGCTTTGTATATCGAACGGGAACTGACCAAACAGCCGCCAAATAACGGCCAACCATTTACCTGTTATGGGCTCAGCCGACGAGAGTCCGATCAGCAATCTGCGGTACCGTGTTTTTGAGGGGGAAACCCCTCTTTACCCCTTCTTTTGGGGCTCTTTAAAAATAGACTTTAAATACAGCTATTTACGGCAGGCCGTTTTTAACAAGGGTAAAAGACGATTTTTATCCTAACGGCCTGTTGTTACTGACGATTATTAAGTTACTCTATT # Right flank : GACACAAGCGCCGCTACGGTGTTGGATATATAAAAACTGTCAACGGGCGCCTGTCACGATTAGCGCTTATACCAACTGATGTCAATGCACCATGCTAGTTTTGATATTGTGACTTATTAAACAATGAATAGGTTGTAATTCCTTAAATAACAACTAATATGTTGTATATAAGCTGTAATACAACATTAAAGTTGTTTGAGGGTGTGATGGTGTCACTTAAAGATATAGCGCGCGCATTGCAAGCGCGTCGCAAATCACTCGGGCTAGAGCAGTCTGACATGTACATGCGTATTGGCATGAAACAACAGCAGTATCAGCGAGTAGAAGCGGGGAGAGATGTTCGGTTATCGACTTTACTGCGCGTGCTCGAAGGGCTCGACCTGACATTAACGCTCGAGCCCAAAATGTCTCAGATGGTTGATGAGCCAGTAAACCTTGATTGTTATAAAGATGATGATAACGACGATCTCGACTTTTGGTTAGGGGCGGAGCATAGCGAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 8498-8707 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEBP01000004.1 Salinivibrio sp. DV, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8498 28 96.4 32 .............C.............. GCTGGACAAAAACGGCGAAGTGCATGTGGAAT 8558 28 100.0 33 ............................ TTCTAGCTCATCGGGTGTGCGTAACAGCTTTAA 8619 28 100.0 32 ............................ TTCAAATCATTGAAGTAGGTGCCGAGCAAAGT 8679 28 85.7 0 ..........C..C............GT | A [8702] ========== ====== ====== ====== ============================ ================================= ================== 4 28 95.5 33 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AAAACTGGACGATCTGTTACCCCGACCGTATGTTGCCGCGATTAGCACCGCTTTATGATGTGGTTTTTACGCAGCCTTATATTGAATATGACAACATTGCGTTGAAAATGGGGAAAAGTAAGCGTTGGTATGATATTAGTTTGAGTCACTTCGAACGTTGGTCGCAAGATGTAGGTGTGCCGTGGCAAATGATCAAACCGCATCTGTTGGATACGATCAACTTGGCGAGAGATATCTGGCCAAATCAACTTGCGCAATTACCGATGTTAACGGAGCACAAAGCGATGCTAAGTGATCATTGGAAGGCCCTGCACAAGGACTTCACCATCGATTCGTAACCCAACGGAGAACTAAGCCGGCACCTTTTTACCCTTATTTTTTGGCTATTTAAAAATAAGCAATAAATACAAAGCTTTATGGAAAGGGGTTTTTAACAAAGGTAAAAGACGATTTGTATCCTAACAGCATGTTGTCACTGACGATTGTTAGGTTAGTCTATT # Right flank : TGTCAATGAGGGATACCCGTAACTGGTTGACCTATATTCATTTTTTAACCATGCAAACCATGTTAAATTAGTGAGCTGTATGAAAGAGTAGCCATACTTTGCCTAGCTTGTCGCCTGACAAAATGGAGTGTTGGAATGCGAAGAAAAACGAAGCGCAAAGACTTTGCAGCGCTTAATGAGGAGTTGAAGCAGATAGCGCATAAGAGTGATGAAAATCGCTGGGAAAGCTACGAATGCCAACTTGTCACTCCCATGTATGGCGGCGGTGTGCTCGCTGGAGAAATTGATCAAGCCATGCCTATTCGCGCGAGTGCGATTCGTGGTCATTTGCGCTTTTGGTGGCGTATCGCGTGTGGTCCGGACAACCCTAAAGGACTACGCAGCGCGGAAGAAGCCATTTGGGGTGGTATTGGTGACCATGGAGCAAAGGCTAGCAAGGTTAGAATCAAAGTAGACAATGTTCGATATAATGGGGATGTACCATCATTTACCTATGAGCG # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1081-3208 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEBP01000006.1 Salinivibrio sp. DV, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1081 28 100.0 32 ............................ ACACTATCGGATAACAGCCTCGCGAACACCGA 1141 28 100.0 32 ............................ TTTGCGATTTGGGCTTGCGCGTAACAACTTTC 1201 28 100.0 32 ............................ GCTATACAGATCGCGACCGCTGAGTCGCTTAG 1261 28 100.0 32 ............................ ACGAACTGCAGCAACGCGCCGAGGCGAACCCA 1321 28 100.0 32 ............................ TTTGAGCACCAAGGTTTTAGCGCGATTATCCC 1381 28 100.0 32 ............................ TGAGTGATTTCTCGGAACCCCGCGTCCATTCG 1441 28 100.0 32 ............................ TTTCAGGTCGGTTATGACAGTGCTCTGAGGCC 1501 28 100.0 32 ............................ CAGCTTTTCGCTAAACGGCTGGAGCTGTTCAG 1561 28 100.0 32 ............................ CAAAGAATTGCGCTTCCTCGGCCGGGGCTTCC 1621 28 100.0 32 ............................ TTCTCCATCTCATCAAGCTCTTTCTTGATTTC 1681 28 100.0 32 ............................ AATTCAACAACTGGACGGAGCGGTAGGTAAAA 1741 28 100.0 32 ............................ ATTATCGGCAGTCACTGTGACTATTGCACCAC 1801 28 100.0 32 ............................ TACATCGGAGCCCGAAAGTGTTTCGACTTCGG 1861 28 100.0 32 ............................ GTTAACCGAAATCATCGATGTGGCCGAGCAGA 1921 28 100.0 32 ............................ TTTATGGGAATGCTCATGATTATCAAACCAAA 1981 28 100.0 32 ............................ TTTCTCGATTAATTCCGCACCAGCATCGAGTG 2041 28 100.0 32 ............................ AAAACGTGGCCGATAAAACGCAAGCCATCGAC 2101 28 100.0 32 ............................ GGCCGCCGATGGTGGCTCCGGCATAGTCGTTG 2161 28 100.0 32 ............................ TTCGCGCGGAATCGCATCAATACCATCGTGCG 2221 28 100.0 32 ............................ GTGTTGACTACCTGATGATTTGGCAAGATTGT 2281 28 100.0 32 ............................ ACACCGATGACAATCGCTAACATGAACCAAAA 2341 28 100.0 32 ............................ ATACAATAACCAAACTCACCAAGCCAAAACTT 2401 28 100.0 32 ............................ GCATGTATTTGGAGTGGATGCCTAAGGAGCTT 2461 28 100.0 32 ............................ TTCGATGTCATCGGGTAGGATGAAATTCACAT 2521 28 100.0 32 ............................ GTAGATTTTCGGTTGTGAATTAATCGCTGCCA 2581 28 100.0 32 ............................ TCGCCGACGTGATCATCAGCGCGGTCGTAATC 2641 28 100.0 32 ............................ CATAGTTAATTGGCTAGTAGAGTCAGATGAGG 2701 28 100.0 32 ............................ TTTCCATATCACATCACCGCGCAACTCGTTGG 2761 28 100.0 32 ............................ GGCCACGCTTGGCACTGAATATGAGTGGTATT 2821 28 100.0 32 ............................ AGAGCACTCGCGCTCTAGTTGGGGGCCGTATG 2881 28 100.0 32 ............................ TGGCCCCGGATCTGGCTAAGGTTCTGACATGG 2941 28 100.0 32 ............................ TAACGAGAGCCACCTAGATTTATCGTCATGGG 3001 28 100.0 32 ............................ ACAAGGCGTACGGGACCATACTGTTGAATAAC 3061 28 100.0 32 ............................ TGATTGACGCGGTCAAGGCTGGTTAAGTGGCG 3121 28 100.0 32 ............................ AATTTGCGCTCTAGGGAATACACGTTGTCATC 3181 28 92.9 0 .........................GC. | ========== ====== ====== ====== ============================ ================================ ================== 36 28 99.8 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTGTTTTGGGGTCCGTCGCTCATAACGCTTTACCTTACCAAGTTTGACTTCTTCAGATGCAATCAGCGCCTCTTGCACAAAGCTATAGGGTAAATCAGGGTTCTCAGTCATGATTTTCCCAATTTTTGCCCAGTACTCAATTTGCTTGGGCACGGAGCGCATTTCAGCTTCTGCATGCACTTTTACATCTGACACAAACTCATCATCTAACCGTACACTGGTTGGCATGATTCACTACCTCGTTTATAAATCTTCACTGGTTAATATGCGACAAAATATCGCGCCTTGCAACATGTTTAGAACTGGCACATCTGGCGTGACTTAAGACGGCTCGGCTTCAACATATGTGATAAGTTGATACCCTTGTGACCCTTCTTTTTTGGCCGCTCAAAAATAAGCAATAAATACAAAGCGTTACGGAAAGCGCCTTTTAACAAGGGTAAAAGGCCATTTTTATCCTAACGGCCTGTTGTAACAGATGATTGTTAGGTTATTCTATA # Right flank : ACGTTATTTGTCGTAGCCGCCGACAAACTCTGACACTCTCGTACATTCTTGCGACAGCCTTTTTGTGACTTGCTGATTATAGTCAGCCTTCTTTAACGCGTTTTATGCGACAAAATGAAGTGGGTGTGGCTGTGATGAATATCAGTAAACAACATCGAATGAGCCTTGTGGAGTGGGCTGAAAGAATTTATCCGAACAGCAAAGGATGGCGTGTAGTGAGCAAAAACTGGCGTTTTTGCGCGTTGGGTTCGGCATTTCCAACCATTATGGAACGCATGATTGAGGTCTTTAACGAGCCCTATTTGGCGCCGGTATTGGCTGACTATCCAGAAGTGATCACTAAACCGCTTAAACCTTACCTCAATGTCTCACTGAGCATGCCTGAGCGGGTAGCAATGCTGCATGACCATTATCGTTTTATGGCGAATACCTTTGGCCGTCATTGCAACACCATTTTTTCAGTCGCGGGTCTGCCTCTTGTCAGCTTTACCGCCAATAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5177-3708 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEBP01000056.1 Salinivibrio sp. DV, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5176 28 100.0 33 ............................ CTCGGCAACGAATATGAGAAACATCAACCGTTC 5115 28 100.0 32 ............................ CAGTGCAATCTCCGCCATGTCGATCAGTGTTT 5055 28 100.0 32 ............................ GTACCGAAAAGGTACACGCCCTTGCGGGTACT 4995 28 100.0 32 ............................ GACAAGAAGAACGCTTCTGCCGGTCATTGCTG 4935 28 100.0 32 ............................ GATAGAGAACACTCCAAGGCTCGCCAACTATT 4875 28 100.0 32 ............................ TCCCGACGCTTATCTGATTAAGTGCGAGCAAC 4815 28 100.0 32 ............................ GCCACTTGCACGCCGACGTCACGCAAGCGCAA 4755 28 100.0 32 ............................ AGGTCACGCCAAAGCGGTGCGCGCACTTTCGC 4695 28 100.0 32 ............................ TTGGATGGGTATCTTCGAATCCCTAGTGACAA 4635 28 100.0 32 ............................ TCACTTTAATACTGCGGTGCCGGCGCTCAAAA 4575 28 100.0 32 ............................ AAAAGAAAGTCTTTGAAGCTGACCGACCACTC 4515 28 100.0 32 ............................ GTTAGCGTCACGCGTGGCCACAAGGTTGGCAG 4455 28 100.0 32 ............................ GCCACGGCGTTCGCCGCTTTCCACTTGCTCAC 4395 28 100.0 32 ............................ ACGAACCGCCGGATGTTTCGAAGGTAATTGTC 4335 28 100.0 32 ............................ TTTTTCTTGTTCATTAGGCATGTCAGGTGCTA 4275 28 100.0 32 ............................ TAAGCTAAAACGCCAAACCATGCAAGCAACCG 4215 28 100.0 32 ............................ TTATGTGTTAATCAAGGTAAACTTTACGTTTT 4155 28 100.0 32 ............................ AAATATATGCCGTAAAACACAAAGGCGCACAC 4095 28 100.0 32 ............................ TTCTGCAGAAAAGTCGCTATACGTACCTATAT 4035 28 100.0 32 ............................ TAGTGACGACCCTCTAGCCCACGCAGACGCGA 3975 28 100.0 32 ............................ ACTTGGCGAAGACGTTAACGTCGGCTGGAACG 3915 28 100.0 32 ............................ ACGGCAAGCACTATCCATGTGATAGGGTTGGC 3855 28 100.0 32 ............................ TTGTCGAGACCGAGCAGGCCAAGGATGCCTGT 3795 28 100.0 32 ............................ TTATGCCAACGTGTTTTTAACGTGAGTTAATA 3735 28 96.4 0 ..........................C. | ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TCTGCGATTGGCCTTACCGTTAGACGATTTTACTTTATATTGGCTTTTACAATGACTACGGCCCACAGACGCTGAACGCAGCGCTTTGTGCTTGGTTTTACGGCCGTTTGTGCGTTCACGCCATACCTTAAAGCTGCGCGGCTTCAACTCACGGCGCATCAGCGCGATAACATCATCTTGTCGCAGGCCATACAGTGTTTCAATAGCTTCAAAAGGGGTCCTGTCTTCCCATGCCATTTCTATAATTCGGTCAATCTCTCCCGGTTGCTCGTTCAAAGCCATATCTGTCTCCCTATGCTGGTGGCAAATAATACGGGTAGCGCAGGAAAAACCGATCAGCGTGTTCTTTCTGACCAATCAATGTTTTCACCCTTATTTTTGGGACATTTAAAAATACACCATAAAAACAGTTAGTTACGAAAGGCCCTTTTTAACAAGGGTAAAAGACGATTTTTATCCTAACAGCCTGTTGTATCGAACGATTGTTAGGTTATTCTATT # Right flank : TTGAAATAGTTGTTTTTTGATGCCAGTTCATTGTTGGTGGGTCGTGGCATAGAGGAAGTAGGGGGATGGTTCAATATCAACATAAGCGCATGACTGGTATTGACCATACACGTTAATTTGGCGCATGTTTGTAGCCAAAGTTAAGCTTACAATTGCATGCTTTTGCATAGTTAAACAGGGTTTTAACGGTTGGATTGCCTTTCCCTTTTTCAAGTCGAGAAATATTGCCTTCTTTCGTCCCCATACGTTCTGCAACCTGCTGTTGAGTTAGCCCGGCCTGCTTACGCATACTGAGTAACATATCGATCAATTCAAACTCAGGCGTCAATTCATCGTATGCTTGTTTCACGTCTGGGTTTTGTAATGCTCTCGCTTTTAATGCCTGTAAGCTATTCATTTTCACCTCTCTCATACGCCCTGTTGCCAATGCTAAGTCTTTCTTTGGTGTCTTTTGGCTTTTCTTCACAAATGCATGAAGGACATAGATGTTGGGACCGTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2786-194 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEBP01000093.1 Salinivibrio sp. DV, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2785 29 100.0 32 ............................. AGGCCACTGATTTGTATTCCATCGCCCAAGAC 2724 29 100.0 32 ............................. CATAACTTTTGAATACTGGTTCGCCGTTTAAT 2663 29 100.0 32 ............................. TCGAATGGGTGGTGAACTACAACGCCGCATTC 2602 29 100.0 32 ............................. CTAATGATCGCGATTAGAAAAGAGGTTGAGTG 2541 29 100.0 32 ............................. CGCTTATCGCCTTAGCTGAAGAGCATAATATG 2480 29 100.0 32 ............................. TTTGTCACAAGAGGCGTGCAGACATTTTGGCA 2419 29 100.0 32 ............................. AGTTCGGTGTCGATGGTAACGGGATGTTCTTT 2358 29 100.0 32 ............................. AAAACCAAAACACGCGAATACGTGGGGCCGCT 2297 29 100.0 32 ............................. GATATTGTTATGACCACTGTTGAAATGGATGA 2236 29 100.0 32 ............................. CTGGCAGCGTAGTGCAAACCCTCCCCATCGAT 2175 29 100.0 32 ............................. CGCAGATACCGGTGATTGGATGGGCTATGTGA 2114 29 100.0 32 ............................. CACGCACTCAGCGGCGTATGTTTGCGGTAATT 2053 29 100.0 32 ............................. GCTTCCGAGCGTTATGTCATCGCCAGCGGTGA 1992 29 100.0 32 ............................. TACAACCAGGTTCGCGATGTACGCACCTATAT 1931 29 100.0 32 ............................. GACAAAAAATCGGTGTCGGCAACGACACCATC 1870 29 100.0 32 ............................. TATCAACATCAGCAAAAGAGTGCCCATCTTGC 1809 29 100.0 32 ............................. TGATGTCTCTGCGCGTGTTGCTTATATCCATC 1748 29 100.0 32 ............................. TGGTGGCGCAAACAAAGTGCTGAGGCATTATC 1687 29 100.0 32 ............................. ATGTTTTGGTTTGATCAGGAAAACCCGCTCAC 1626 29 100.0 32 ............................. ATTACGAGAGTTACCAACGTAGATATCTGGAT 1565 29 100.0 32 ............................. GTTTTTTCCCGTTTCACGGTCAATCGATTTTT 1504 29 100.0 32 ............................. GAAAGATCATGGCGCTTTACCCTTTTATAACC 1443 29 100.0 32 ............................. ACAGGCCGCAAATGGCGGTAGTTAATATTCAT 1382 29 100.0 32 ............................. CAGTGATTAACGAGCCACTATTGCAACACTCC 1321 29 100.0 33 ............................. CATCCCGCGCCGTTTCGCGGTGGCCGTCGTTGC 1259 29 100.0 32 ............................. GTTGTGGAGGATGTTCCCGTCCCAGAAGTTGA 1198 29 100.0 32 ............................. TCAATAACTCTGGTGGGAGGATTGAAGTCAAA 1137 29 100.0 32 ............................. GGCAACTCGTCAAATCTGTATCACTTAAACCT 1076 29 100.0 32 ............................. TGAACATGCGGGTTAGGCTCGCCGTATTCGTT 1015 29 100.0 32 ............................. TTACTTGATTTTAGCTGAGGTGATTATGAATC 954 29 100.0 32 ............................. GCGACAAATGGTGGCGTGGCCTGCATTGTCGA 893 29 100.0 32 ............................. GTTTTTTCCCGTTTCACGGTCAATCGATTTTT 832 29 100.0 32 ............................. ACTTTGACACCACCGTCACAGGCGGCCTTGTG 771 29 100.0 32 ............................. GCGATAACCTTGGCGTCGCGATTTCGGGTGTT 710 29 100.0 32 ............................. TGGCTATTCACTATGGATATGATCATTTTGTC 649 29 100.0 32 ............................. TTTTTCCCGAAAAACGTCTGTTATTTTTGGTA 588 29 96.6 32 ............................T CTGCTCCACCTTGACCGCTTTTTTAAGCTGGC 527 29 96.6 32 ............................T CTGCTCCACCTTGACCGCTTTTTTAAGCTGGC 466 29 100.0 32 ............................. CTGCGCAGTGTAAGTGGTCAGGAAGTCTATGT 405 29 100.0 32 ............................. TATTTAACGCGCTATCGATCACTGCGGGTGGA 344 29 100.0 32 ............................. CCAGAGCGTGAAGGCGCAAACCCTAAGCTCAA 283 29 100.0 32 ............................. TGATAGCGCATGCTATACATCATTTCTGGGTG 222 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.8 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : CGATGATCGAAGAGGTATTAGCGGCAGGTGATATTACACCGCCTGAACCGCCTCATGACGCCCAACCACCAGCTATACCTGAGCCAAAATCAATCGGTGATAGCGGACATAGGAGCGGCTAGATAATGAGTATGCTTGTTGTCGTCACCGAAGCCGTACCGCCAAGGTTACGTGGCAGACTTGCTGTCTGGCTGCTCGAAGTTCGCGCTGGTGTTTATGTGGGCGATGTAACACGTCGCGTGCGGGAAATGATTTGGGAGCAGATAACTGAACTCGCTGATGTAGGCAACGTGGTGATGTGTTGGGCGGTGAATAATGAATCAGGTTTTGACTTTCAAACTTATGGTGAGAATCGCCGAGAGCCTGTCGATTTGGATGGTTTAAGGTTGGTGGTATTCAAGCCGAGTGATGAGGATAAATAAGCCCAGTTTGCTCTTTAAAAAGTTGGTAGAAAAATGCAGGTCGATTTTTGTTATATAAAACAGTAATATCCGTTTAGA # Right flank : GACAGTGCCGAAGATACGGAACCCTATGATGGAGGTGTCGATTTAGATGATTGGTGATTGCAGTACTGCAATCTCTCTTGCGATTACTTAGTTAGTGCATCTGCGTGGCGTTGCTTCCTAAATCATTGAACTTATCCGAGCCGCGATCAGATCATCAACGCCTCAAACAGGTCACAGATGATGAGCAAAGCCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13499-25346 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEBP01000141.1 Salinivibrio sp. DV, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 13499 32 100.0 34 ................................ CAGCACTGCCGGTACCTATGACTTTTTGATCGTG 13565 32 100.0 34 ................................ TGTTTATCAGACTGATGCATTAGGCCGCACTGTG 13631 32 100.0 33 ................................ TTGATTGAGGCGCATCAGCGCCAAGTCAACGAG 13696 32 96.9 34 A............................... ATGTATTCGTCTTGCGTCAGACCATCCGGCAAAA 13762 32 100.0 34 ................................ TATCGAATCAATCAAGTAAGACGAAGCCGGGAAC 13828 32 100.0 33 ................................ GAACACGGCTGCTTCGGTATCCATTACCGCTTG 13893 32 100.0 33 ................................ ATCTGCAAACGGATTAATTGACGTGGCTAATGA 13958 32 100.0 33 ................................ GATTGGCAAACCGCAGATTTAGCCATCGAGCTG 14023 32 100.0 33 ................................ TCGCGTAACGCATCAATCTCCGCCTGTTTCTTT 14088 32 100.0 35 ................................ ACGTATGCCACTGGCCGCTTGGCGGTGGCTTTTAC 14155 32 100.0 35 ................................ GAGCATTCGCTCGGTCTAATTGAGGAAGTAACGCG 14222 32 100.0 34 ................................ TTGCAACGTCATTTGCTGATTTGCGTTTTGCTGC 14288 32 100.0 33 ................................ CGCTACTCCTTACTAGAGTTTTTGCTACGCACC 14353 32 100.0 38 ................................ TTGATTCACCGGGCGGGATGGTTAATGGTCTGTTTGAG 14423 32 100.0 34 ................................ GAGCTCAGGACGCGCGGTGATGCTAAAGTTGGTT 14489 32 100.0 35 ................................ TTTTTCGTGGTGTTAGTTTGGTCGTTGGCAAAGAT 14556 32 100.0 34 ................................ TCATCAATCTCAACAAAGCCTGATGCCGACTCGT 14622 32 100.0 33 ................................ AAAGTGATTCACCGGATCGGCGGCGACGTTCCG 14687 32 100.0 35 ................................ TTGGCCGTGTCGTTATGAGTATGAAAAAAGAATAA 14754 32 100.0 34 ................................ TTAGCTTCTGCGGGGTGGTTCGCGCAGCGGTAGC 14820 32 100.0 33 ................................ CGGTGTATATGCCATATGCGGCAATAGTACGCC 14885 32 100.0 35 ................................ ATTGTTGCCTGCTGATCAGGTCAAAGGGCAAGTTA 14952 32 100.0 35 ................................ ACATCAACGGCGTGCCCTATCTGCGTGAAGACGAG 15019 32 100.0 33 ................................ CAACTGGAACTGGCGCAACGGCGGAACCTCTTC 15084 32 100.0 33 ................................ TTTCCAGTCGCGCGGGAATCGCGTTAGCTCGAC 15149 32 100.0 33 ................................ CAGCGCCATGTTCTGCATCACTGCCGCTGCCAA 15214 32 100.0 33 ................................ AAGCCATCGATGGCCATTCGGCCTGAGCCAATC 15279 32 100.0 34 ................................ TCGCGTAACGCATCAATCTCCGCCTGTTTCTTTT 15345 32 100.0 34 ................................ AAGCACGTCTAAGCTGATTTTGCTCAGTTTGAAT 15411 32 100.0 35 ................................ CATGATTGCCTCTGGGTCATTGGTCTTTATGGCAA 15478 32 100.0 33 ................................ ACTTAGATGATGCGCAGGCAGCGCCTCGCCGAC 15543 32 100.0 34 ................................ TGGTACTCTTCATATGTCTCGAAGTAGCGGTAAT 15609 32 100.0 33 ................................ CAGTTGGGATTTAGTGTTTGTTGATGAAATTGA 15674 32 100.0 33 ................................ CATGACTGGTCTGCAACCGGTGACAGCTACAAG 15739 32 100.0 34 ................................ CTCATCAAATACTACGGCACAAATGTAGGCCAAC 15805 32 100.0 34 ................................ TCGCTTACACTCAGGGCGGCGCATCAACTCCCGC 15871 32 100.0 33 ................................ CAGTACCAAGCCAGCCAAATTGATAAAGCCTTT 15936 32 100.0 35 ................................ TAGACCAGTCATTTTTAACAGCTCATTTAACACGT 16003 32 100.0 34 ................................ TTGCGCGATTATTTCACCTTTGGTGATGCCGCAC 16069 32 100.0 35 ................................ CACATGGGCAGGTTGCGGCCTGTTCCGTCGCGGTA 16136 32 100.0 34 ................................ TAGGAGGCTAGAGGGTGATGCACTTTGTTTGATC 16202 32 100.0 34 ................................ CAATACATAAAGCTGTATGGCGATGCAGGGATCC 16268 32 100.0 33 ................................ CAGTTTGCAAACTGGTGATGGATGAAGTGAACG 16333 32 100.0 34 ................................ CCGCACGTACGGCTCTGCCGTAGCGATGCTCTAA 16399 32 100.0 34 ................................ AAGCACAGCTACACTCTGAGAACAATACTCGTGA 16465 32 100.0 34 ................................ TTATATTTTTCGAACCAAGCCTTACCTATGCCGG 16531 32 100.0 34 ................................ TTTGAATTCGTCACCGACCCTTCTAACAAGGACG 16597 32 100.0 35 ................................ ATCCTAAAAATGGCTCTACCCGACCTATGCGAGGA 16664 32 100.0 34 ................................ TTTGCACCCAATGATAAAGTCGCTATTCGAATGG 16730 32 100.0 33 ................................ CCACTCGTCCCACTCGAACGCACCATCCATCAG 16795 32 100.0 35 ................................ ATCTAGATCATCAGGCGGTATATAGGCGTTTTTCA 16862 32 100.0 33 ................................ TCCGAGTGGCGAGTCACCGTATCACTTTCTTTT 16927 32 100.0 34 ................................ TTTCACTGTGGAGAATATGGTGATAAACACGGAC 16993 32 100.0 35 ................................ TGAGTATTGAATTTCGACATCCTTTCTATCTTTAA 17060 32 100.0 33 ................................ TTTTGACCGTTCACACGGTCATAAGACCACCTT 17125 32 100.0 33 ................................ TCTGATTCCTACAAAGGCAATCAGTAACGCAAT 17190 32 100.0 35 ................................ TCGTCATCCAGCCCCATCCAATCCCCTTTGTTGTC 17257 32 100.0 34 ................................ ACTGCTGATTGCGCGCATTCGACGATTCGGAAAT 17323 32 100.0 33 ................................ CAGAAGTGCAATAAGGATATTGTTATGACTACT 17388 32 100.0 34 ................................ TGGAATTTCGCCCGTTTCAACAAAGGCCTTAAAC 17454 32 100.0 34 ................................ TGTTAGCGATACCCACATCCAAGGTTATTTGCAT 17520 32 100.0 34 ................................ TTCAACCAACAGTTCGATTTGCGTTTTAATGTCT 17586 32 100.0 34 ................................ ACTTCACCCAGTGCGCGGTCCATCTCGATGGCGG 17652 32 100.0 34 ................................ ATATTTTTCACTCCGCCAAGGCAGGTGGATTATC 17718 32 100.0 34 ................................ TGGGCCATCGCACACGCACTGATTAATGAGCCGC 17784 32 100.0 35 ................................ CACCCAGCCATCGGGTACGCCGTTGGATTTATTGG 17851 32 100.0 34 ................................ TTTCACTGTGGAGAATATGGTGATAAACACGGAC 17917 32 100.0 33 ................................ CCGCCAAACTTTAAAGACGGTGACGCTAAACTA 17982 32 100.0 34 ................................ CATGATTTCGAGTTCTAACAACTCATTATAGTCA 18048 32 100.0 33 ................................ CGGCGATGGACCATTATGGTCGCGTCTATTACA 18113 32 100.0 35 ................................ AAGATACCGTTGTTCAAATGCAAATGGGTACTGAC 18180 32 100.0 36 ................................ CTTTCGTAACTGGTTATCACAACAAGGATGACGGGG 18248 32 100.0 34 ................................ CGGTAAATGCGGTAAATTAAAACTCGGTAATCTT 18314 32 100.0 34 ................................ CTTGATTGAAGCTGAGTATGCACCAATGCGAGTT 18380 32 100.0 34 ................................ TTTTTAATCACCTGAACCACACAAACGCCCTACA 18446 32 100.0 33 ................................ CAGACTCAAGTTCAAACTGCCACTCGATATACA 18511 32 100.0 34 ................................ TTCTATTGTGAGCTTGGGACGATCGCAGGATGGC 18577 32 100.0 34 ................................ TCGACTCGATAGTTGCTGGGCTTTTCTTTTAAAT 18643 32 100.0 34 ................................ CAAGATGAAACGCGCCGCATTGTGCGTGTTGAGC 18709 32 100.0 34 ................................ TTCTACCTTTTGCATCATGTCAACAGTGCGATAA 18775 32 100.0 35 ................................ TTCGATTAAGCCATCTATCACCGCTGCAACCTGAT 18842 32 100.0 34 ................................ CCCCACCGCAATTGACAGCTCGACAACCGCTTGC 18908 32 100.0 34 ................................ ACGCGCACCGTTTCGCCCCACGAACCGGCTTTGC 18974 32 100.0 33 ................................ CAGCTTGGCGCGCTGGTTGGCGTTTTGCTGCAA 19039 32 100.0 33 ................................ GAGCCCGACATGCGAAATGAATCGTCCAGTGTT 19104 32 100.0 34 ................................ GGATAACGGTAGACGACTGATGCGATCAATGCTT 19170 32 100.0 34 ................................ TCGCGCCAGGCTTTCCATACAGCCAGATGCTCCT 19236 32 100.0 33 ................................ TCTGTGACCGACGTCGGCTTGCCATCTTTCTGA 19301 32 100.0 35 ................................ TACCGAATCCATTCGGGAAGATTCCCGAATCCTAG 19368 32 100.0 34 ................................ TTTTGCTCATCGGCTTGGTTGCTGATCCTGTTGA 19434 32 100.0 34 ................................ ATTTATGTACCCAGTAGGTGAACCAAAAGTTTCT 19500 32 100.0 33 ................................ CTGATTGCATTTGCAGATATTCATAGCGATCCC 19565 32 100.0 33 ................................ CTGATTGCATTTGCAGATATTCATAGCGATCCC 19630 32 100.0 33 ................................ TTCAACCCATCATCAGGCGAACTTGGCCAAGAG 19695 32 100.0 34 ................................ TCGTCTATCTGGGCGCATAGGCGCTTGTCGCAGT 19761 32 100.0 34 ................................ TAGCTCGGTCATTCAATACCCCTTCAGAATCCTG 19827 32 100.0 35 ................................ CGCTTTTGCCCTTGACAGCTCTCCACTTGGTTTTG 19894 32 100.0 33 ................................ CAGAATGAGATCATAGCGGCGCAAGGCCACATC 19959 32 100.0 34 ................................ GGGCTCAGGCGTTGGCGCCGGCTCGTTCGCTGGC 20025 32 100.0 34 ................................ GTATTACCGCGAGGCACAGTACCATTGGCCAGAG 20091 32 100.0 34 ................................ CATTGCGGCCAGCACGTCCGCTTCGCTTTTGCCG 20157 32 100.0 35 ................................ GTCTCTGGGATTGCATGCGTGCAGCGGGGGCAACA 20224 32 100.0 35 ................................ CATGAAGAGCTGGACCAAAGCTAGCACCGGCGGTT 20291 32 100.0 35 ................................ CTCTTTGTTTTTATAGTGATTTGAGAAGATGTTTT 20358 32 100.0 33 ................................ TTGAGCGTGTACCAAGATTTATTAGTCGGTTTC 20423 32 100.0 33 ................................ TCCGACATCTACGATTGCCGCTTTTATTAATGC 20488 32 100.0 34 ................................ TCTTTCACTAAAAAGCATCTACGCAAGCCAGCGT 20554 32 100.0 33 ................................ TCGCTATGCATCGAGGACGCCACCGCGCAGTGG 20619 32 100.0 34 ................................ TGTTTCCTAATCAATCACGATAATCTGGCTGGTA 20685 32 100.0 35 ................................ ACCCTTGGGACCAGAGTCATACATCGGTCCCTCGT 20752 32 100.0 35 ................................ ACCTCAAAGTGAACAAGTCATGCAATAGTTCGCAA 20819 32 100.0 33 ................................ CATCGAGCGCATGGTCATGCCATAAAAATCGCC 20884 32 100.0 34 ................................ AAGAACTACGTGGTGGTGACAGCCCCAAAAAACT 20950 32 100.0 34 ................................ TAGTGGGGTGTTGTGTTTTTTCAGCGACTTTCCA 21016 32 100.0 34 ................................ AAAATTCAAAAACTGTAAATCCAACGCGAAACAC 21082 32 100.0 34 ................................ AACTTCGCTGACAATTTCTGCTAACGCTTGGTTA 21148 32 100.0 35 ................................ TATCTAGTGTTTCGTTTGTGCGCATGGTCGTTACC 21215 32 100.0 35 ................................ CTCCTTCTGTGGAGTTTGACGGCGTTTCTGCTCTA 21282 32 100.0 34 ................................ CTGATAAACGCTTGAGTTCTATCTGCGCCCCTGT 21348 32 100.0 34 ................................ CCTTATTACTGGCAAGTTCCGTTCTAGCGACCCA 21414 32 100.0 34 ................................ TTCTTGTCGGCATCACGGTCGAATATGTGTAAAA 21480 32 100.0 34 ................................ ATATTAGAGAAGTCAGCATCAGAAAAATAACGTC 21546 32 100.0 34 ................................ CACTGATGCTACTTCACCTCTCGGTAATTTAGGT 21612 32 100.0 33 ................................ TGAGTACATCGTGCCAAAGCCCCGTCCTTCGCT 21677 32 100.0 35 ................................ TTCAGGCCACCAGTGTCCTTTTGCGTGATGCTGCG 21744 32 100.0 33 ................................ CTTATTCTTATTTCGCGCTGTTTTTTTGATCGC 21809 32 100.0 34 ................................ CATGTCGTAGATCCTTTTGCTCAGTGTCTGAAAA 21875 32 100.0 35 ................................ TGGATTAACGTCATCAATCATTATTGACATTTCAA 21942 32 100.0 34 ................................ TATCTGCTAATGCGCGATCTCGATACCATGCCAG 22008 32 100.0 34 ................................ TCTCGACTTTGTGAATAATGAACACCGGATTTAT 22074 32 100.0 34 ................................ ACCGGCCTATTTGTTTTCCTGCTCCATGACCTGA 22140 32 100.0 34 ................................ AGTGATGATGCTCATATGTTCAAGCCTATTAGAC 22206 32 100.0 34 ................................ TGGCCATTCCGGCGCGTCTTTGACCATATCGTTA 22272 32 100.0 34 ................................ CGTTTTGCGATCTTGGCATGAAAACAAAGCAAGG 22338 32 100.0 34 ................................ GATTATCCCGAGCGCAGTCCATACAACTCAATCA 22404 32 100.0 34 ................................ GCGCCCTTATTTTCACAAAGCGCCTTTGCGGCAT 22470 32 100.0 35 ................................ TTTTCTTCGAGCACACGATAGACGACATTTTGATC 22537 32 100.0 34 ................................ AATGTGCTTTTTGGCTAAGGCTTCGGCTTGCTTT 22603 32 100.0 33 ................................ CAGCTCACCCACCCGGCGGAGCACCTCACGGAA 22668 32 100.0 35 ................................ TCATCACGCTCAGACTCAGCCATGTGCGGTTTTTT 22735 32 100.0 36 ................................ ATTTCCTCGCCTTGCTCGGCTTCTTTGAGCACGTAC 22803 32 100.0 35 ................................ ATCGACTCTTGCATCACTTGGAACTGCTGATTCGC 22870 32 100.0 33 ................................ TACAAGCGATGGCTTGTACATCGGATGCGCGTA 22935 32 100.0 36 ................................ CTGTTCCTGGTGGTGCAAGGAGCAACGTTGATAATG 23003 32 100.0 35 ................................ TTGGCAATCACAAACGACGTGCAGTTATCATGCGG 23070 32 100.0 34 ................................ TTCGCTGCCGCCAATAAGGCCAATAATCAGCATT 23136 32 100.0 34 ................................ CACTAACAAAGCCCTCTTTACACTCACAGTGTAA 23202 32 100.0 34 ................................ CCACCCATAGCGCCCCAGAATGAAGTCCAAGACT 23268 32 100.0 34 ................................ CATCATAGCTGTTTTCTAAGCTGCCTATGCGGCA 23334 32 100.0 33 ................................ CTTTTTCGAAGTTTAGAAATTCAGCAGACGGAG 23399 32 100.0 33 ................................ GCTTGAATCTTGTGGGTCTGATGGTTGAGCTTC 23464 32 100.0 35 ................................ CATCGTGAAAAAGTCCAAAAAGCTCACAAAAGAAC 23531 32 100.0 35 ................................ TGATTCTTCGTGCTCGTACCAGAACCGGCTTACTT 23598 32 100.0 34 ................................ CGCGTGAACGGGCTCAACAAGGTTTTTTCCCGTT 23664 32 100.0 34 ................................ ACGCGCATTCCAGCCAAGCCGTACACAAGCCCAG 23730 32 100.0 34 ................................ ATAATAGTTGGCGCCGGTATGGATCTCAGCATAC 23796 32 100.0 33 ................................ TCGTCTGTCATTGCAGCAAGCTCCTGTTTCACT 23861 32 100.0 33 ................................ TTCCTTGATAAACACCAGCTCGCTTAGCAAGCT 23926 32 100.0 35 ................................ TCGCAATCATCACTAGAAAGAGACGCAGCATTTAC 23993 32 100.0 34 ................................ TCTCGACTTTGTGAATAATGAACACCGGATTTAT 24059 32 100.0 34 ................................ TCGACCTGCCGGTGACAGAAATGGCACCGGCGTG 24125 32 100.0 33 ................................ CGTTTCTACAACAGACAGTGTGTGAGTCTCTGA 24190 32 100.0 34 ................................ CTGATTGCATTTGCAGGTATTCATATCGATCCCA 24256 32 100.0 34 ................................ ATAATAGTTGGCGCCGGTATGGATCTCAGCATAC 24322 32 100.0 36 ................................ GAGTTAGCAAAGAAATACACTTTTTTACCTTTGACA 24390 32 100.0 33 ................................ TCGTCTGTCATTGCAGCAAGCTCCTGTTTCACT 24455 32 100.0 33 ................................ TTCCTTGATAAACACCAGCTCGCTTAGCAAGCT 24520 32 100.0 35 ................................ TCGCAATCATCACTAGAAAGAGACGCAGCATTTAC 24587 32 100.0 34 ................................ TCTCGACTTTGTGAATAATGAACACCGGATTTAT 24653 32 100.0 35 ................................ ACGATACCTTGCACGCCAACTTTAAACGCCACTAC 24720 32 100.0 35 ................................ ATGATCGATAAATCGCACCGGCGGCGCGTCAGTTG 24787 32 100.0 34 ................................ CAAGACCACGCACCTCAGACAAACGATAATGCGG 24853 32 100.0 34 ................................ CAGAGAGGCCATTTCAGCGCGTTGCCAAAAAAAA 24919 32 100.0 33 ................................ CGAACACTGCCGCATTATTGCGGGCAAGGTTCG 24984 32 100.0 34 ................................ CCTAGAGCGCAAATTGGGGCGGATTAAGCAGCAG 25050 32 100.0 35 ................................ ATGCACAAACACTGTTACGTGACGCCGTACAGCAA 25117 32 100.0 35 ................................ AGTATCAATTGAGCTCTTATTCAGTTTCATCGCGT 25184 32 100.0 34 ................................ CCCTAACAAGGATGTCAGGTGCATCAATGAAACC 25250 32 100.0 33 ................................ TACTTCGAAAGGCTTGCGAGCTGTTCGCAAAAA 25315 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 180 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : TTTTGTGATAAAAAAATAAGGAGTTTGCGTAATGATGGTGTTGGTGACTTATGATGTATCCTTTGACAGTGATGATGGCAAAAGACGCCTCAGACAGTTGGCGAAAGTATGCTTAGACTATGGAGTGAGAGTGCAATACTCTGTATTTGAATGTGACGTAGATGCAGCACAATGGTTAACGTTTAAAGATAAACTTTTGGCTATTTATGACTCTGAGGTAGACAGTTTGCGCTTTTACAAGCTCGGCAAAAATTGGCATAACAAAGTCGAGCATCACGGTGCTAAAGTCGCCATAGACATATTCAAAGATACGCTTATTTTATAATCGCTAGGCCTGAGTTCTCATCAAAACACTGGAGATCTAGCGATCGTATAAGCTCTTTAAAAATATGGAAAAATTTTATTTTTATAAATTAAAACAAATTTGTAGTGTTCAACTGCACAAGGTTAGCGAAAAACGCTACATTGTGTTAGGTTACACCTGCCCTGAAGAATGGGCG # Right flank : CCGCATTATGACGAAGAAAAAGCTATGAGGACGAGTCGAATCTGGCAAAGGCTAAGCTACACCCGCTTCAAAGGCTTAACCACGCTCTCTAAGCCTTCAACTTTTAATGCTAAGCACAATTGCATCAGCTCCCCGAGCTCGCCGTCGGGGAATTCTGCTTTGTTTTGAAACCACAGTAAGTATTCTTCAGGCAGATCAATCAATACACGGCCTGCGTACTTGCCAAACGGCATGCGCATATTGGCCAATTTAATCAGTTGCGCTTTGTCCATGAAGCATTCCTTGTCGATTACGCCGTGGCTTGTTGGGTGTTCTCACGCTGCTGAGCAATCATTTCGAGCAACATGGTTTCACGTACCAGCGATTGCCCGGCTTTGTCACTGTTTGCCATCACCGCTTTGTTGTGCGCGATCGCGTGAGACAAATTCACCCACACAGGCCGCATGCCGTTATGGATTTCATAGTGCTCAAACGTGGGAGTACCAAGCTCTCGATCGACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : NA //