Array 1 89113-91100 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXJM010000030.1 Streptomyces sp. GbtcB7 B7_30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 89113 29 100.0 32 ............................. GTGCCGGGCCTGACGCTGACGAACGTCATCAC 89174 29 96.6 32 ............................A CCCACCACGCTCGCCGGAGTGTTCGACCTTCC 89235 29 89.7 32 .G..........G.T.............. CCAGGCACCGGGCCGATCGTGTCCATTCCGGC 89296 29 96.6 32 ........................G.... GGCGCTCTCGTCGCTGCGGAGGACGTGGCCGT 89357 29 100.0 33 ............................. TCCCCCGCGACCAGGTCGCGCGCCACGAGTTCG G [89359] 89420 29 96.6 32 ..............T.............. TGCGGTGGTCACTTCCCCCCAGCGCACTTCCC 89481 29 93.1 32 ............GG............... CGCACGGTCCGCTTCATCCCGTCCAAGCTCAG 89542 29 93.1 32 ............GG............... TGGAACTTGTCCGTTGACCTTGTCGGGCACGG 89603 29 93.1 32 ............GG............... GCCGCGATCATCGGGGCGGGTGGGACCGTCGC 89664 29 100.0 32 ............................. CTGCCGGACTGGCTTCCGCCGGGACCGGTGGA 89725 29 100.0 32 ............................. GTTGGCGGTGTAGATGCTGCCGATCCCGACCA 89786 29 100.0 32 ............................. CCGAGGAGTCTCGCCACGCTGCACGAGGTGCG 89847 29 96.6 32 ......T...................... ATGCGGACCTCGGCGCCGAACTCGCTTTCGCG 89908 29 96.6 32 .....T....................... CAGCCCTCCGGGGTCAGTGCCAGCATGCCCGA G [89925] 89970 29 96.6 32 ...............A............. TGATGCAGCATCAGGCGCGCGTTCGGACCGGT 90031 29 100.0 32 ............................. TTGCCCTGGCCCGCGCTGGAAGCTGCTTTGTC 90092 29 100.0 32 ............................. TGCTTGGCGATATCGATCGCCTGGTCGATGAT 90153 29 96.6 32 .......T..................... CTCGGAGCCGCCACCACCGGAGCCGTCGGTGG 90214 29 100.0 32 ............................. AGAGCAAAGACCGCTACCCAAAACCCGACCGC 90275 29 96.6 32 .........A................... CCGCCGGTGGTGACCGTGCTCGCGCGCAGGTA 90336 29 100.0 32 ............................. GGCTCGTTGTGGTCATCACGGAAGGCCACGGC 90397 29 96.6 32 ...........G................. TGGTGGCCGTTCGGCTCCCTCCACCAGCTCGA 90458 29 96.6 32 .............G............... TGGGCGCCCTCCGCCAAAGCTGCTGTCGATGG 90519 29 96.6 32 .................A........... ATCCGCGCCTCGATGCAGCGGCGCCTCCGGCA 90580 29 100.0 33 ............................. ACGAATCGCGCGGGGTCTAGGTTCTGATCCTCG 90642 29 93.1 32 .C..........................A CCCACCACGCTCGCCGGAGTGTTCGACCTGCC 90703 29 89.7 32 .G..........G.T.............. CCGGGCACCGGGCCGATCGTGTCCATTCCGGC 90764 29 93.1 32 ......................C.....T CCGGACTGGGTGTCGGTGGAGGACCGGATGCC 90825 29 93.1 32 .....A.....................G. GACTTCTTCGACGTCCTTGGGGGGATCCTCAC T [90828] 90887 29 89.7 32 T.........T..A............... CGAGCGACCGGTCCCGGGGGCATGGCCAACGC 90948 29 100.0 32 ............................. AGCGCGTTCGCGTCCAGGTGGCCGAGCGCGTT 91009 29 100.0 32 ............................. GACACCCACCTGATCGGCCTCGGTCACGCGTG 91070 29 96.6 0 ........................A.... | C,G [91094,91098] ========== ====== ====== ====== ============================= ================================= ================== 33 29 96.6 32 CTGCTCCCCGCACCCGCGGGGATGTTCCC # Left flank : CGTGGAATCGGGTTGTCCGCGCCGATCCGGACGCACCCAGTCGCCGGAGTGAGCGCCGGCGCATGGGCCGCTGGGCTGCGCGGGTCTGCCATCTTCCCGGTTGTGTCGACCACCGCATGATGCGGGCCACGGTCAAGGCAATGCCTCCGGCGGGGGATCGGCCGGCACCGGGATGGAGGGGGCGCCGTTTCCGCCCGCGGGTCTGCGACCGCGCCGACACCTGAAGCCGCGACAACACCCACAACCGACAACACCTCCACTGGTCATGCAAGATGCCTACACGCAAACTAAAACCCAGCAGGCCAAACCGAGGAAACAAACTTGATCTGCAGCCGATAGAGCTATCCAGCCCCCGACAGGCACACTCAAGCCATAAGGTGACCGATTCGCTATCGGCACCCACCCCAGAAAGAGATAAGCACGAAATGCACCCTTTGCTGAGATCGGTGAAAGTACGCGAAACCGTGCAGTCCTAGCCCCAGACCAGCAGGTCAGACAGC # Right flank : CGCAGGTGTACCAGGTACACGCTAACAATTCATCCGAATGCTGCTTGGTGGCGCAGCAAGGAGCCGTGGAGCAGTCGGCGCCCAAGAAGTCGGATTCCGCTCGTCAGAACACGGAGCCGCACTAGTCTCGTTGTCTGACTGAACGGCATGCAGGTGGGGGAAGCAGGAACGTGACGGGCATAGTTGGGGTACACGGCATTCGGCATACCAGGACGTCGAAAGCGCAGCTGACGGACGACTGGTCCCGAGCTCTCAATGGCGGTCTTGGCGAGCTGGACATGCCGGACCTACCTGCTGGCGCGTTGGAACTGCCGCACTGGACGGGGCTCCTGGCACGAGGAGCGAACCATCTGGGCCCAGAGGAGGATCTCTTCGACGCCTCGGTGCCTTTGAACGAGGAGGAAGCCGACTTCGTAGCCACGGCGCTGGAGGAAGTCGTCCGTCAGGAAGACCTGGCCCGTGTCCAGGAGCTGGGGTTGCAGACGCTTGGTTTGCCGCAG # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.50, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 103212-105535 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGXJM010000030.1 Streptomyces sp. GbtcB7 B7_30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 103212 29 72.4 32 TCTGC........G..........GC... CAGCAGTTCGCCACGGACTTGCAGACCTTGGC 103273 29 89.7 33 ........T....G..........G.... AACCACGGCATCGACGACACCCGCCTCCCTGCA 103335 29 89.7 32 .........A...A..........G.... AGCACCATGACCGGTAAGGGAAGCGTGAGGAT CG [103353] 103398 29 89.7 32 .............G...A......G.... GCGGTGTCACCCGTGATCGTGGTGGTGTTCCC 103459 29 89.7 32 ....................A.C.G.... ACGGACTATTGGCTCAACCGGGACCGGACGTC 103520 29 89.7 32 ........T...............GC... CGGACCGGCCGGTACTGCATCCAGATCGAGAC 103581 29 82.8 32 T..........G.A.......C..G.... GGCCTTCCGACGGGCATCACCGGGTGGGTCAG 103642 29 82.8 32 .........A...T..T.......C...A AGGCCGTCGATGATGACGGTGGTACCGCCCGG 103703 29 79.3 32 .....T.G...C.GG.........G.... GTGTCCGTGGTCGTCATGAGGGTCGCGACCGG 103764 29 79.3 32 G.........TG.G.T........G.... AACGACGTGCCGTACGACCGCGAGAAGACGTA 103825 29 89.7 32 .............GT.........A.... AACATGGTCTGGGACGACACCGGCACCCCGGG A [103832] 103887 29 86.2 32 ........T.T..A..........G.... CTGCACGTGGAGAAGTTCGCCCAGGACACGTT 103948 29 96.6 32 ........................G.... ATGATCAGGTTGCCGTCCTGGTCGATGCGGCC 104009 29 86.2 32 ........G.T..G..........G.... CGAATAGGCCCGGAAAGCGGGCAACCCCGGCC 104070 29 89.7 32 .............G......A...G.... GAGGGCGGCGTCCATGCCACCTCCAAGACGCT 104131 29 86.2 32 T............G......T...G.... ATGGCCATGAAACAACCGAACGGCCAGACGAT 104192 29 86.2 32 T..........G.G..........G.... GAGGCCAGGGAATCACCAGTCGCGATGAGCCC 104253 29 93.1 32 .............G..........G.... TCGAACCGGTTCACCCTGGTCCCGTCCCCGTC 104314 29 86.2 32 .........A...G....A.....G.... GCCCTGCTCGGACAGCATCGCGCCGTGATCCA 104375 29 82.8 32 ...T....................GG.TT GGCAGCAAGTTGCCCATCGAGACGGATGTCAG 104436 29 82.8 32 ........T.T..G..A.......G.... GTCTGGGAGCAGGCTAAGGGCCTCGCGGACAA 104497 29 89.7 32 ............AG..........G.... TTCCTCAAGAAGGTCCGCGATGTGGCACTTGT 104558 27 82.8 32 ...........G.--.........G...G GCGACAGGGAGCTTCGCGACGCCGATCTGGCC 104617 29 89.7 32 ...............T.A......G.... GGAACGCTGATCGGCTGCTACCTGAAGGTCGA 104678 29 89.7 32 ........T....AT.............. ATCTGGCCTCCAGCGCGGATGCGGAGGAGGAG 104739 29 89.7 32 ..........TG................A GTGTCGACTGCGGTGGGCTGGACGATCCCGTA 104800 29 100.0 32 ............................. GCCACGATCTCCCCGGGCACAGCGGCCGCCGT 104861 29 100.0 32 ............................. CACGTCGGCATCGTCACCGCCGTGCCAGCGTC 104922 29 100.0 32 ............................. TGGGCGACGCCGTTCGGCGTGAACTGGGCAGC 104983 29 100.0 32 ............................. GCGACGTCCTCGAACCAGGCGAGGGCCTCGGG 105044 29 93.1 32 ..A.........................A GACTGTCCCGCCATCGAGCCGGGGAGTTCCTC C [105053] 105106 29 93.1 29 ........T........A........... CACTCATGCATGAGTTCGTGGAAGATGTT 105164 29 86.2 11 G....G.T.C................... GGGTAGCCGCA Deletion [105204] 105204 29 65.5 31 G..ACA..ACTCTG............... GGCACGACCTGGTACTACTACAGACCACCAC 105264 29 96.6 32 .......G..................... GGCGCGCTGTGATGGACGAGGATGTCGCTGTG 105325 28 93.1 32 .....T..-.................... ATCTGGCTGGCGTAGAAGGCCTGCGCGGTGCC 105385 29 100.0 32 ............................. GACCTCCTGCAGGGCGAGGCCATGGCCACGGC 105446 29 93.1 32 ..............A......G....... TGGTACGGGTTGTACCTGAAGACCGGGCTCAA 105507 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 39 29 89.1 31 CTGCTCCCCGCACCCGCGGGGATGTTCCC # Left flank : ATGAGCACCCTGGGTCGGGGCGAGCCTACGTCTTGCCGATCTTCTCGCTGGTCACCGTCCCCTGCGGTATATACGCATGCTCCCGAACCCCTGCACGCGCGGGGATGGCCCCGGGCTCAAAACTGCGGCCGGTGAAGGCAAGATCTGTTCCCCGCACGCGCGGGGATGGTCCCGCCGTCGAGCAGGTGCAGGACGAGACCAAGCACTGCTCCCCGCACGCGTGGGGATGGTTCCAACTCCAGTGCGACCGCAGGAAGATGTACCTGCTCCCTGCATGCGCGGGGGGATGGTCCCGCTTCGCGGATGAGCTCCCGGCCGACGTTTCGCTGCTCCCCGCGCGGGGATGGTCCCGTCACACTCTGCGGTGAGCTGAGAAAGGCTCACTGCTGCCCGCGCGCGAGGATGGTCCCATGGAGGAATCCGTCCGCGCAGTGATAGCCCGCTGCTCCCCGCGCGCGGGGATGGTCCCGACATGGAAGTCCCCCACGGGGCCATGACGA # Right flank : CGTCTCGCCGAAGAGCGGCCCGAGGGTCTTGCCCTGCTCCCCGCACCCGTTTCGGCCGATGCCCGGCCCGCCACGCTCACCGCCACCGCTGTCGTGCTCGGCTGCCTGACCCCCGTGTGGTACCGCTGCGCCGTGTCCGCCACCGACGAATGGGCCGCGGCGGTCCGCGCCCTGGTCAACACGGGGCGCAAGCCCCTCGCCGAGAGCCTCGGGCTGGTCCTGCCCGCGGACATCGCGGACGAGCGCAGGATGTGGACCTTCGTCGGCAAGCTGTCCCGACTCCCGTACGACGACAGGGCCGCGGCTCTCAATCCGTACCGGAACGCACCGCCGTCCGGGCCTTCGCCGACCTGACGTAATGATGCGAAACGGTGGGGCGTTCCGGGTCGCTGACGTCCAACATATTGATCAGAAACTCATGGCGTTCACTCGTCGAGGACCTAGTGGACGTGTCGGCCGCCGAAGTATCCGCGCACGATGTGGGGTTGGCGTTGTCGGCG # Questionable array : NO Score: 4.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.45, 5:0, 6:0.25, 7:-0.04, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [56-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //