Array 1 390058-388042 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGHL01000004.1 Novosphingobium meiothermophilum strain SYSU G00007 SYSU_G00007_Contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 390057 36 100.0 30 .................................... GCTGCACTGGACGCTGCATTGGCCGCTGCA 389991 36 100.0 30 .................................... CCAGTCGGTCTATCTTTCTGCCGACGAAAC 389925 36 100.0 30 .................................... ACGGCCGCGATGGTTTCCTCACCTCCGGCC 389859 36 100.0 30 .................................... TAGCCGGAACCGGACAGGGTGCCTGCATCA 389793 36 100.0 30 .................................... AGCCGATGCCATCCGCCGCTATCAGGTGGA 389727 36 100.0 30 .................................... GTGGGCCTCATCACCGGCAATCCCCAAGCA 389661 36 100.0 30 .................................... TATCCTCCAGCACGCTCCGGAGCTGCGCTT 389595 36 100.0 30 .................................... TCCATCGGGCATTGATATGACCCGCGACAA 389529 36 100.0 30 .................................... CGGGCGGCTTGGAGTTTCCGGCAATGCCAA 389463 36 100.0 30 .................................... TTGAATGGATTGTCATGATGCAGTTCTTTC 389397 36 100.0 30 .................................... TATAAAGTTCCGACAGTCTTGATAGACACA 389331 36 100.0 30 .................................... AGCCGGTCATGCAGCAAGGTTTCGGCGACA 389265 36 100.0 30 .................................... GTGCTGATCCTCGACAGTTTCAGCCACGCA 389199 36 100.0 30 .................................... GTCACGCCATCACTCCACATAGATCGGATC 389133 36 100.0 30 .................................... CCAAGCCGCGTAGCGTGCGGCCATTCGTGC 389067 36 100.0 31 .................................... AAGCCGGTCATGCAGCAAGGTTTCGGCGAGA 389000 36 100.0 30 .................................... GCTCCTGCTCCTTGGCCAACTTTTCCTGCC 388934 36 100.0 30 .................................... ACGCGAAGCAGGCCGAAGCCGACATCGCCA 388868 36 100.0 30 .................................... TTGGTGATCTGGACAGCACGGGCGTGCTGA 388802 36 100.0 30 .................................... CCACGCCATGCAGGCCCATGGGGCACTTCA 388736 36 100.0 30 .................................... GGTGCAGCGTGTTGACGCATCTGTTCCGAT 388670 36 100.0 29 .................................... TCTATGACTTGGGCAACAATGCCACCACG 388605 36 100.0 30 .................................... TGGTGGAGAGCTTTGCCGATGGCACAGGCG 388539 36 100.0 30 .................................... GATCGATGCCATTCGCATCGCGTGCGGCGC 388473 36 100.0 30 .................................... CAGATCAGGAAGGACGCCGAACAGTTCGCC 388407 36 100.0 30 .................................... TGGCGTCGATGTAGGTGCCCTCGCGCGACA 388341 36 100.0 30 .................................... ACCAGCTGCAACAAGACGGGGCGGAGTTCG 388275 36 100.0 30 .................................... GCCGATCAGATCTGGGCGCTCACCTTCTGC 388209 36 100.0 30 .................................... CCGCGTCCCAAAGGCCCAGTTCGCGCAGGC 388143 36 100.0 30 .................................... ATCATCTCGCACTGATGAAAGGTCAGCGCC 388077 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 31 36 100.0 30 GTTGCCGCTGGACCGCGATTTCTGAACTGCTATGCT # Left flank : AACGGGCGCGGCTTCGGCGTTGTGCTGGGCAGCGGCGCGCGCTTCGATGTAACCAAGATCGCGCCAATGATCGAGGCGGTCCATGAGAGGCTCGCCGGGGTCATCATCGAGCGGCTGCCATGGCGGGAGTTCATCGATCGGTATGACCGTCCGGGGACTCTGTTCTATCTAGATCCGCCCTACTACGGCTGCGAGACCGACTATGGCCGCGACATGTTCGGGCGCGATGAGTTCGAGGTGATGGCCGACAAGCTGCGAGCCATTCGCGGGCGGTTCATCCTGTCGCTCAACGATCATCCAGCAGTGCGGCGAATATTCGATGGCTTCGCGATCGAAGAGGCGAAAGTGCGTTATCAGGTGGGCGGCATGGACAATTCGAAAATAGCCGGCGAGGTGATCATCTCGAACTGACGAAAGGTCGCGGGGGGCGCCCCCCGCCATCAACCGGCCATAATCAGACGTTCGGGTCGAAGTGGACGCCACCACTTGGGAGCCGCCAG # Right flank : GGATGTCGATACAACTCTTTGACGGGAAAGAGAAAAATCGGCATCCAGTAGTGCAAATCCCGCAGCGAATCGTCAGAATAGTGCAAGTTGAGCAGGATTTTGGCGTTGGCGCCGACGCCTTTGGCCATTGAAGCGGATGATGTTCTCATATTGTCGGTCGGTGAAGCTGAGAATGTGCACGTCGCCTTTTTCCGGCAGGTTTGACTCGATTCGCCGCACATGGGCTTCGAACTGTTCTTTTCCAGAGCAGAACCTTGCGTAGATAGAAAGCTGGCTCATCTCGAAGCCTTCATCAAGCAGATACTCGCGGAACTGTGTCGCCGCGCGGGCCTCTTCACGCGTTCGCACCGGAAGATCGAACATCACCAGTATCCACATCAGCCGATACCCGCTGAGTTGGGAGCCTTCCTCACGCATCATGCCTTTCCGGCATCACGTATTCCCCGACAGGATGACGGGTGGAAATCGCACGCCAACCGAGTGCCGTGGGCGGTGTGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCGCTGGACCGCGATTTCTGAACTGCTATGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCCGCTGGACCGCGATCTCTGAACAGCTATGGT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.20,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //