Array 1 94204-87673 **** Predicted by CRISPRDetect 2.4 *** >NC_015388.1 Desulfobacca acetoxidans DSM 11109, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 94203 37 100.0 37 ..................................... TCAAGGTGTCGTCGGCGGCGTTGAATACCCCAACAGC 94129 37 100.0 37 ..................................... ATAAGTGGGAGGGGAATGACAAATGTAATAAAAAAAA 94055 37 100.0 36 ..................................... AGTATTTCCATCGTTTGTCAAACCATTCCTGGTTTT 93982 37 100.0 36 ..................................... TCCGACTATCACCTTCTTTGAGGCGGATAATGACGC 93909 37 100.0 36 ..................................... AATTACGGAGATAATCCTCCCGCCGGAGATATTCCA 93836 37 100.0 36 ..................................... AATTGTGTCAGCTTGCCCAGGTAGAGGTAGTCGCCA 93763 37 100.0 35 ..................................... CTCAAAGAAACTGCGGCGGCTTTCGCAGGCGATGA 93691 37 100.0 36 ..................................... AACGCCTGGAGGAAATCTTCGCCTGGGACCGACCGG 93618 37 100.0 36 ..................................... TCAAGGTGTCGTCGGCGGCGTTGAATACCCCAACAG 93545 37 100.0 36 ..................................... TCCGACTATCACCTTCTTTGAGGCGGATAATGACGC 93472 37 100.0 36 ..................................... TATCAAACTTCAGGCCGCTTGTTTTTAAGCCGCAGG 93399 37 100.0 34 ..................................... TTCGGTCGAGGACGCCATCTCCGCCAAGCGTAAA 93328 37 100.0 37 ..................................... ATACCAAATCTCCGTCAGGGGCCATTGCGGCTGCCAA 93254 37 100.0 36 ..................................... TCCTTCAGCCTTATCTCTCTGGGGAATACGAAAAGA 93181 37 100.0 36 ..................................... TGTTGGCGACGAACCCATAGAAGAGACCTGGAAGGG 93108 37 100.0 36 ..................................... ATCAATGGCTGCCGGAGGTTGAGCATATACCTTCGG 93035 37 100.0 35 ..................................... AAGATTATCCAAGCGTCGCCGGAAAAAACTTTCGT 92963 37 100.0 36 ..................................... TCTACGGCTATTAATAAGAAAACTTCCCCTAAATCC 92890 37 100.0 35 ..................................... CTTATAGGGATGACGAACCGGGCTGCGGCGTCTAT 92818 37 100.0 35 ..................................... TGAAGGCGGGCCCGGAGACCGCCAGGGCCGCCCAG 92746 37 100.0 35 ..................................... TTGCTTACCGACTTGGGGGATAACTCTGGCGGAAG 92674 37 100.0 36 ..................................... TTTGACTATGGGGGCCGCACAACATCTGCAGTTGAT 92601 37 100.0 36 ..................................... GTTAATAAGTTCCCATGGATAGGGCAGAAACCCTGG 92528 37 100.0 35 ..................................... AACAAATTATAAAAGGAGGCTCACAAGCCTAAAAA 92456 37 100.0 36 ..................................... CCGAGTTCCACGAAGTGGTGCGAAACTTCCAGACGC 92383 37 100.0 37 ..................................... TACGGATTACACGAACCTTGAGATTCAAATGGTCCAT 92309 37 100.0 37 ..................................... ACAAAGTTATACAGTTCTAAGCTTTTCACGTTCTTCC 92235 37 100.0 35 ..................................... TCCCAGGGGGGGGAGAAAGGCCCATACCAGCCCGC 92163 37 100.0 35 ..................................... CTCTTTATACTCCAATATCGGCAACCGGCCTTTCC 92091 37 100.0 37 ..................................... GCCCCGAGCTAAAAATCAACAGGAGAAAAATTATGAA 92017 37 100.0 35 ..................................... ATCTTCATGAATCCGTATTAGGAATCTTAGATCAA 91945 37 100.0 36 ..................................... TTCCCTGAGTTGATTCTAATGCTCCTTCCGATACAG 91872 37 100.0 35 ..................................... CTTTTTCCCAGGCTATACCCAATGCCTGAGCCAGC 91800 37 100.0 37 ..................................... TTTGGATGACCCCAACCGCATCATCCAATTTCACTCG 91726 37 100.0 37 ..................................... TTATTGCTGAAATATATCCTGATGCTTCAGCCACACT 91652 37 100.0 37 ..................................... CTTGACATCCTCTCCGCCCTAAAGGACGGAGATTCCT 91578 37 100.0 36 ..................................... CCGTAAATTGGCCAGGGCGCTGCCAACTCCAATACC 91505 37 100.0 36 ..................................... ATCTGCCGGGCTAGAGCCGGGGACACTGCTGTCAAG 91432 37 100.0 36 ..................................... TGACGGTAGCATGGGGCACCGTCTCCCTGATTTCCC 91359 37 100.0 35 ..................................... TGATAGCCAGGGTTGGCATCCACGACTGGACCCAG 91287 37 100.0 36 ..................................... ATCTGCCGGGCTAGAGCCGGGGACACTGCTGTCAAG 91214 37 100.0 36 ..................................... ACCGCTTCACCCGGTTTAGGGCGAAGAATTTCCCCA 91141 37 100.0 37 ..................................... TTATGCTGGAGGAGAACAGTTCCCCCTGCCTGGGGAA 91067 37 100.0 36 ..................................... TCTTCCAGAGCCGCAAGCCAGTGCAATTAACCCGCA 90994 37 100.0 36 ..................................... CATATGCTCCTCGTTGGCTGATCTCAACTGGGAATT 90921 37 100.0 35 ..................................... CAAGCAAGCCATTACCCATGCCATGACGCTTCTGG 90849 37 100.0 36 ..................................... GCCGCGATAGAAGTGAGAAGGAGCATGGACCAGACT 90776 37 100.0 35 ..................................... TAGATGTCCCTGTCTCCGGAAAAACTGTATCCAAG 90704 37 100.0 36 ..................................... ATAAAGAGGTCAAGGCCATCGAGGGCCGATCCTTGA 90631 37 100.0 35 ..................................... TTCTTCGTGTCCGGCGGACTAGTCTGCCAATGGAA 90559 37 100.0 36 ..................................... TGAATTCCTCATCAAATTTCTGACATGAATAGCAAT 90486 37 97.3 36 ..................A.................. TAATTTGGCAGTTGAGGAGGATGAGTCCTATTTGGC 90413 37 100.0 37 ..................................... TTGGATAGGTTCCCTTCTTGCTAACCACGATCCCAGC 90339 37 100.0 36 ..................................... TCCGTGATGCGCAATATGCACATCATGCGATAGTGG 90266 37 100.0 35 ..................................... ATTTTTCATTTCCATGGCCCTTGCCTGCTTGCGGC 90194 37 100.0 36 ..................................... ACGCGATTCTTGACGTTCCATGGCCGTAATCCATAG 90121 37 100.0 34 ..................................... ATTTATCAGGCTCGTCCATATGAATGGAAATTGC 90050 37 100.0 36 ..................................... ATGCAAGAATGGCCAAGCATCGCAAGAGCCAGAAAA 89977 37 100.0 36 ..................................... GAATCACGCCCAGTGGCCTGGAGTGGGGCATTCATG 89904 37 100.0 36 ..................................... TCAATACGGGGTCGTTCCCTGGCCCGGAATCTAGGG 89831 37 100.0 37 ..................................... AAATACTGAGGGACAATCTAATTGAAATAGGAATCGA 89757 37 100.0 36 ..................................... TCGAGTGAAGCATATACCCCCTCGCCCCAAACCTTT 89684 37 100.0 37 ..................................... TATGTAACATATCCCCGGCCTGTCTGAAAGCTTCCTT 89610 37 100.0 36 ..................................... TTTCATCTACCGGATCAGTGGCAGGGGAACTCAGGA 89537 37 100.0 37 ..................................... AGAGCTATGCCAGTGCCCCTGGCGCAGAGGCCGTGGT 89463 37 100.0 39 ..................................... TCGAGTTGCGTTCCCTCACTGACTATGTTGGTAGAAGGA 89387 37 100.0 36 ..................................... TTATTGTGACTCCAGTAATCCCGAGGTTATAAGCCA 89314 37 100.0 36 ..................................... TTGATGGGCAAGGCAAGGGAAAAGATCGGAAGCGGG 89241 37 100.0 35 ..................................... CAAGCAAGCCATTACCCATGCCATGACGCTTCTGG 89169 37 100.0 35 ..................................... ATCCCACCGACCGGGCGGTATTCAACCATGGCCTG 89097 37 100.0 36 ..................................... TTTATATGGGATTTGATCCGGCTGTAATGGCCGCCA 89024 37 100.0 36 ..................................... TTTATATGGGATTTGATCCGGCTGTAATGGCCGCCA 88951 37 100.0 36 ..................................... TACGCGCTATAAACTCCGCCGACCGCAGCCAACATG 88878 37 100.0 35 ..................................... ATAGAGAGGTCAAGGCCATCGAGGGCCGATCCTTG 88806 37 100.0 37 ..................................... ACGATTAGGCCTTCGACCATGCCCTTAAGGCTGGAGA 88732 37 100.0 35 ..................................... ATTACTATAAAGTTAGGTATTGATAACTCTCACGA 88660 37 100.0 34 ..................................... CCTCCTTCAGGTCCGCAGGGACCTATTCCAAATT 88589 37 100.0 36 ..................................... GCCCTTGGACTCCCGATATCCCAGCAGATTAGCCCT 88516 37 100.0 37 ..................................... CCATATTGACCGTTCAAACTCCTCCTTGACAAATTGA 88442 37 100.0 37 ..................................... TTCAAAATAGAAAAATCCCCCGTCTCATGAATTAAGA 88368 37 100.0 36 ..................................... ACATAATTGGTTCTATAATTACAACCTGGGACTGGA 88295 37 100.0 37 ..................................... ATATAATCGACCAGCGACACCCCTTCCGGCTGCACGC 88221 37 100.0 37 ..................................... TAAATTTACCTTCAAACAACTGCCATTCGCATGCTGA 88147 37 100.0 36 ..................................... TATGTCAGGCCGAGGCCGTGCCCGGCGTCCACCCGC 88074 37 97.3 37 .....A............................... ACCTGGGACCTGATCATGCCGTGCGAGCACGAGCAGG 88000 37 97.3 36 .....A............................... TTTATCGACTTGTGATAGCACGAGCCTGATAGAGTT 87927 37 97.3 36 .....A............................... AATTTGTTGTATGATCGATAACGTGAATCGGTTAGA 87854 37 97.3 36 .....A............................... TCTTATTCCTCCACATCACCCAAGAACTTGGCTCTT 87781 37 97.3 35 .....A............................... TGGCCAAAGCAACACCAGGCTGGACCCAGCAGGGG 87709 37 97.3 0 .....A............................... | ========== ====== ====== ====== ===================================== ======================================= ================== 90 37 99.8 36 CTTTTGGCGATACATCCACTAAAACAAGGATTGAAAC # Left flank : TGGATGAAATTCTGTTCCTCCAAGATGGGTCCGCAGCGCCGTTGGATTATAAATACGCCGAATATAAGGAACGAACCTTTAAAAACCACCGTTTTCAACTAACTTTTTATGGACTGCTTATCAGGGATAACTATTCTGTCCCGGTAAATAAAGGCTATATTGTCTATACCCGGAGCCGCAATAAGCTGATCGAAGTGGGAATCACCGAATCCATGTATAATGAGTTGCAGGATATTATCGCTGTATTGACGTCTATAGTTGTTCAAGGGAAATATCCCCCGCCCACGAAGGCAAAAGCCAGATGCCTGGATTGTTGCTACCGAAATATTTGTGAAAAGGTGATCTGATCAAAAATCCATCGTGATAATATATGGATAACTTAACTCTGGTACATCAATAATACCTTTTAAGGCAATCTCTTTTGAGGTTTGAGCTGCAAATATCTGCTTACGAGAAATTTTATAACATGTTGTTTTGGCTTTGGAACCGGCAGAAAGCGG # Right flank : AATGAAAATCCATAAAATTGAAGATTGTCAACAAAAATTGACCCCTTTGGTCATCGAAAATTGACCCCCCTGGTTAGCGGAAAAGTTGCTGTTAACGAGGGCCAGCCTTGGCCGGGGTAGACTTATTGGTGCCATGAGGGGCGGATTCGGCCTGCCCCGCAAACGCTTGGTGCCGGCCGGCCGAATCCGCTTTGGCCGGCCGGCGGCTGGCTTCTCCCAGCCGAACTTTTTCCGGTTCATGCGGCCTCTGGTAAAAGCTTCTGTTTCATGCGAAAACTATTCCCGTTAATCACAAAAATATGGGAGTGGTGCACCAGAGGGTCAATGATGGCAGCAGCGATTACCTGGTCGGTAAAAATCGGTCCCCAATCTTCGAAGCCGTAATTACTGGTCAAAATCATGGCCCCCTTCTCATAGCGAATCGATACTAATTGAAAAAGGAGATTGGCCTGTTCCGGGGTGATGGGCAGATAGCCTAGTTCGTCCAGAATCACCAGGTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTGGCGATACATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 2 1488840-1490147 **** Predicted by CRISPRDetect 2.4 *** >NC_015388.1 Desulfobacca acetoxidans DSM 11109, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1488840 37 100.0 38 ..................................... TAATTTATAAAGGCTTCGTAGAATTCTATAGGTCTTTG 1488915 37 100.0 37 ..................................... GGTTCCGGCTTCACACAGACCAACTACGATCTCTTGC 1488989 37 100.0 37 ..................................... TTGGCAAGATTCCTCACATATCTTTCATCGAAATCGC 1489063 37 100.0 37 ..................................... TCATATAAGATCGAAAGGCTTGTCTTTGTTCCTCAGA 1489137 37 100.0 38 ..................................... TTCTTTGTGTCGTTCCTTGAACGCTTTAAGATTTTTTA 1489212 37 100.0 38 ..................................... TAAGCGAATTACCCACTCCTGGATTAGCTAAAGATATT 1489287 37 100.0 41 ..................................... CTTCCAGCTGGGGCAAGGCCTTCAAAAGATTGTTAATCAAT 1489365 37 100.0 37 ..................................... CCAACTTGCATATGACAGAGGAAAGCTTTTCATCAAT 1489439 37 100.0 38 ..................................... TGTTCCGCTACAGCTCGGCACATGCCCAGGCCATGCTC 1489514 37 100.0 36 ..................................... AGAGGTCCTGCGGGCGCACCACCGTGGCGTTGCCGC 1489587 37 100.0 40 ..................................... AGCTTCATTACCCATTCAATATCGCCGGCGAGAGCGAAAA 1489664 37 100.0 40 ..................................... TACAAGACATGTTTGTAACTTCTGATGTATTCAACGTCGC 1489741 37 100.0 37 ..................................... CTAATCGATATCTGAGTCTCCATGTCAAATGCGTTGA 1489815 37 100.0 37 ..................................... CTTGATCAGATTGGAAGAGGCTGTAGAAGGCAACATT 1489889 37 100.0 38 ..................................... TCCTGGTCGGCGTTATCCAGTAAGTCAAGGACTTCATC 1489964 37 100.0 39 ..................................... TATTACAGCGGTCGCGGTATCTGTGAAGGCTGTGGTTTC 1490040 37 94.6 33 ...................C......G.......... CCGTAGGGGCGGGGTTACCCCGCCCCTACGCCG 1490110 37 86.5 0 G...........................T...AG..A | A [1490137] ========== ====== ====== ====== ===================================== ========================================= ================== 18 37 98.9 38 CTTACAACGATAAGAAGAGTCTTCGGACGATTGCGAC # Left flank : TATCCCCTCTGCGGCGCCTGTCGGCCCCGGATAGAGATAATGGGACAGGGAGTGGTTTCGCAAGATCCTGATTATATTATTTTATAAGTTCCCATGTTCTCCCGAACACAACGAAGCATAAAAACAGTCGACTTCCAACGGATTGCCAGGAGTCATTACCTCTAACCTCTTACCCCTTACCTATAACCTGTTTTTATATAAGTGCACATGTTCTGCCGAACACAACGAAGCATAAAAACAGAATCGGTGCGGCTGCTCACAATAATGTTTTTGCTGTTCACGGCTCACGGCTCACTGTTTTTATATAAGCAGTAGACTATACCTGGGGAGAAAAATAACGGGGAGGTTACACGGAATTTGGAACATAGTGGTTTTTCTCATATTTCGAGATGGAAAAGGGGTTTGGCAGGATAGGCGGGGAGCAGCAAAGCTGGAAAAAACAGGGGTTACACGCAGGGGAGTTCTATCCTATCGATAATTCACAGGAAATATAAGGGTGC # Right flank : AATCAGACTGTTTTGGCACAGGCTGGAAAGCCTGTGCTACTGGGTATAGGGGATTTTGGCGGATTATTCGGGATTATGGGGCAGAAGATGGGAGCGGGGTTTCTCCGTTTGAGGCGTTTTTCAGCATATCAGAAGTATTATCTTTCCTGAAAGAACATCCCCGCCCGGCACATAGGGAGGTTTACACCAGGGTGGAGGTTTATGATGAGGATACCTACTAATGGGGGGAGCAGGGCAGCAAGGATAAGCCCCTCAAAGCCCTGAGAAACGTCAACATCCTGTAACTTCCGGAAGCCTTGAAAGAATTTGCACCGGCATACGCCTGCTAAAATTTTCCTGTGGAGCGGATTGGCGCGCAAGGCGAATGGAGGGGATTAAAGCATTTTCACCAGTGCGGCGACTAGGGGCACGGACGCGGCCAGCATCCCGCCAAGGCGTAGGGTGAGGTCATGCTTCAGGCGGAGTGCAGGCTTTTTCATATCGCATTGCAGGAGGGCAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTACAACGATAAGAAGAGTCTTCGGACGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 1934754-1935816 **** Predicted by CRISPRDetect 2.4 *** >NC_015388.1 Desulfobacca acetoxidans DSM 11109, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 1934754 36 100.0 38 .................................... CAACGCCTCCATGGCCTCGGCCACGCTGTTGATCAGCC 1934828 36 100.0 38 .................................... TAAACACAAACATCTATGCCTTTTACTCGCCTGGTTGG 1934902 36 100.0 40 .................................... CTTATGAAGAGTCTCCCTGATGGCCGCCGGGTCGAGCCTT 1934978 36 100.0 32 .................................... TTAGGCAGGATAGTAAACTCTGGAGCATTGTT 1935046 36 100.0 36 .................................... TTTTCCTCAACGCAAATTACCGCAGGGAGAGCAATT 1935118 36 100.0 37 .................................... TGTTCTCCAAGAATCTTTCTTTTATCAAGATAAAAGA 1935191 36 100.0 41 .................................... GTTTTTTCATTTTCTTTGTTCTTTGCTCCGGCCCGGGATCA 1935268 36 100.0 35 .................................... GCTAAAGCGGTCGCCGGAGACGTGGTAGAGCTACA 1935339 36 100.0 36 .................................... ATCAGGCTCTGCACTTTTACAATTTCTCATTTTATT 1935411 36 100.0 38 .................................... ATAGTTGCTATCATCTATTAACGTTACTTTCATTTTCC 1935485 36 100.0 38 .................................... TCATATCCCCAACTAAGAGATTTTTGATGCCCGTAAAT 1935559 36 100.0 38 .................................... GTAATAGTTGCCAACTTTTCCATTTGTTTCTCCTTTCA 1935633 36 100.0 37 .................................... ATTATCCATACGTATTTGTAGTCATTATAATCCTTCT 1935706 36 100.0 39 .................................... CTTCTGGCTCTCACTTTGCACTCATTTTCGAGTAGCAAG 1935781 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 15 36 100.0 37 CTCAGAAACATTGACCTGATTAGAAGGGATTGCGAC # Left flank : CTATGATATTACCGACAACCGCCGCCGCCAGCGTTTGGCCAAGATGCTGAGCAATTACGGCCACCGGGTGCAGAAAAGCGTTTTTGAATGCCGTCTAGACGACCGGCAGTATTTAAAATTGAAGAAGGGCATCGAGGAGATCATAGACTGGGATGATGACAGCGTGCGGTATTATTTTCTCTGCCAACATTGCACGGACAACATCGAAATCAGCGGTTGGGGTGTGGTCCGGGATGATGAAGACGTGATCGTGGTGTAATCACGCAGCCAATTTTCACAATTGCACGTTTGCACGCATCTCCGGGGTTTTTCCTGAAATCGTCTAAGGTGTTGAAATTATTCAGTGTGGCAAAAAAGATACATTAAATGATAACTCTACGGATTAATTGGCAAATCTGGATATTTCACAAGATGCTCAAGCTGTGGCGGGGGGTATGCGGCCTAGATACGTGTTTTTGGCCTTTATTTTCCAACAAAACCAGCCCGCTGGAGGGGGTGCT # Right flank : CGATAAAGCCAGGTACGAGTAGCGAGGACTGAGGACTGAGTAAAATACAACGCTTCGAAGATTTGATTGCTTGGCAGAAGGCTCGGGAGCTGGCGAAGGCGGTGTACCTGGTTGCCACTAAGGGAGAATTGTCTCGGGATTTTGGGTTTCGGGATCAGATCAGGCGGTCGGCCGTATCAGTCATGGCCAATTTGGCGGAAGGGTTTGAACGGGGCCGACGGACCGAATTCCATCAGTTTATTTCCATTGCCAAATCCTCTTGCGCCGAATTACGGTCGCATCTCTATCTCGCCCTTGATATTGGCTATCTTGATCAAGAAACATTTACCCGGCTGCATGCCATGACCGAGGAACTCTCCCGCATTTTAGGAGGTCTCCGGGCGTCCGTGGAGAAGCAGAAGGGTTGAGGAAGCTTCACCACTCAGTCCTCGGCCCTCGTTACTGCCCTTGGCCTGATTAGAAGGGATTGCGACGATAAAGCCAGGTACGAGTAGCGAGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAGAAACATTGACCTGATTAGAAGGGATTGCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 4 3066547-3067046 **** Predicted by CRISPRDetect 2.4 *** >NC_015388.1 Desulfobacca acetoxidans DSM 11109, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 3066547 37 100.0 41 ..................................... TATGGGCCGTGGAAAACGTCAATTTGATTGAGAAAATCCTG 3066625 37 100.0 39 ..................................... CGGTCTCTTGTTCCTCGGGTAGTGCCGGGATTTGGTCTT 3066701 37 100.0 41 ..................................... TCACATATTCACAGGGATTTCAATGCAGCCTTGATCTCGGC 3066779 37 100.0 44 ..................................... GAAAGCCAAAGCTGCTGCTGAGGGGATCAGCTACGAAGAGCTGA 3066860 37 100.0 40 ..................................... AGAGAGCAAGTGGAAACTGCGCTTCGGAATAGAGCCAAAG 3066937 37 100.0 36 ..................................... ACCATTTGGGGGCTAGAGTCCCTGGAGGCCACTGGC 3067010 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 7 37 100.0 40 GTCGCAATCCCTTCGTAATCAGGTCAATGAAGCAGAG # Left flank : TAGAGATGCGACCGTAATTCGGCGCAAGAGGATTTGGCACAGGCCAAGGGCAGTAACGAGGGCCGAGGACTGAGGACCGAGTGGTGAAGCTTCCTCAACCCTTCTGCTTCTCCACGGACGCCCGGAGACCTCCTAAAATTCGGGAGAGTTCCTCGGTCATGGCATGCAGCCGGGAAAATGTTTCTTGATCAAGATAGCCAATATCAAGGGCGAGATAGAGATGCGACCGTAATTCGGCGCAAGAGGATTTGGCAATGGAAATAAACTGATGGAATTCGGTCCGTCGGCCCCGTTCAAACCCTTCCGCCAAATTGGCCATGACTGATACGGCCGACCGCCTGATCTGATCCCGAAACCCAAAATCCCGAGACAATTCCCCCTTCGTGGCAACCAGGTACACCGCCTTAGCCAGCTACCGAGCCTTCTGCCAAGCAATCAAATCTTCGAAGCGTTGTATTTTACTCAGTCCTCAGTCCTCGCTACTCGTACCTGGCTTTATC # Right flank : GAGCAGGTTTTATGCCGCTCAGCGAGCATCCTTGCTTTTTAGCTAACCACAACCATAGAGGACATGTCAAGAGAAAAATTGCTCTTTTCGTTATTCCCGAAATAAGTTTGAAGATGTCCCGGAATAAAATGCCGACTTCGCAGAGTGCATGTTCACAATCTCGATATCTATTGATTAATACTAGTATATTAGGATTATTGAATATTTGAAGATCCCAAAAATATTTCCTGAAAAGGACATCTTCAAACTTTTGGCGCTTGTGAGCTTGTATCTATTTTTTGTCATGGCTACCATATTGAATTATTTATAGATATAGATGCGATTGTTGGGCCTTGAGGGGCCAAAACCAAAAAGTTTGAAGATCCCCTAACGCCCGGTCCCGAGGGGGGGGATCTTCAAACTTTTTGACCCAAGACCAAAATCGGCTTTTATCGGCTCCAACCTATTGGTATTCAAAGAGAAAGAACCTCATTGGACCGATTTTCGAAAAGTTTGAAGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATCCCTTCGTAATCAGGTCAATGAAGCAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.90,-3.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //